SelenoDB
Release 2.0
Chart Advanced
Gene Report for SPG00000005_2.0
Identity
GeneGlutathione peroxidase 2 (GPx2)
SpeciesHomo sapiens (Human)
DescriptionThis gene encodes a selenium-dependent glutathione peroxidase that is one of two isoenzymes responsible for the majority of the glutathione-dependent hydrogen peroxide-reducing activity in the epithelium of the gastrointestinal tract. (NCBI)
FamilyGlutathione peroxidase
SynonymsNone
Subfamily Glutathione peroxidase 2 (GPx2)
Synonyms Gastrointestinal glutathione peroxidase (GI-GPx)
Gene IDSPG00000005
Gene release2.0
External ID ENSG00000176153.10 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000019_2.0SPR00000024_2.0SPP00000019_2.0SPS00000008_2.0
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.288
Middle East0.5430.213
Europe0.5810.3330.333
Central-South Asia0.5910.3570.3870.410
East Asia0.5540.3890.3630.3850.346
Oceania0.3490.2140.2440.2390.3960.358
America0.3070.1120.1710.1900.2330.2680.341

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.525
Middle East0.6820.632
Europe0.0020.1470.071
Central-South Asia0.0010.2990.0200.013
East Asia0.0000.0000.0000.0000.000
Oceania0.5030.4980.5750.3530.2020.333
America0.0000.9100.7530.2640.0350.5930.134

Low P-value

High P-value

Sequence
Sequence SEQ00000005_2.0
External ID ENSG00000176153.10 (Ensembl)
Chart Advanced

© 2007-2024 SelenoDB
- A public source of selenium -