SelenoDB
Release 2.0
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Gene Report for SPG00000018_2.0
Identity
Gene15 kDa selenoprotein (Sel15)
SpeciesHomo sapiens (Human)
DescriptionThe specific function is not known. Sel15 levels differentially respond to selenium supplementation. Studies in mouse suggest that this selenoprotein may have redox function and may be involved in the quality control of protein folding. This gene is localized on chromosome 1p31, a genetic locus commonly mutated or deleted in human cancers. (NCBI)
Family15 kDa selenoprotein
Synonyms 15kDa selenoprotein (15kDa)
Selenoprotein 15 (SEP15)
SubfamilyNone
SynonymsNone
Gene IDSPG00000018
Gene release2.0
External ID ENSG00000183291.11 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000061_2.0SPR00000079_2.0SPP00000067_2.0SPS00000015_2.0
SPT00000062_2.0SPR00000080_2.0SPP00000068_2.0SPS00000016_2.0
SPT00000063_2.0SPR00000081_2.0SPP00000069_2.0N/A
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.269
Middle East0.6790.538
Europe0.4970.4370.402
Central-South Asia0.6480.5900.5180.607
East Asia0.6340.5530.5890.5580.642
Oceania0.2640.2780.2940.3310.5440.281
America0.4430.3080.3690.3850.4750.4590.649

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.628
Middle East0.0590.205
Europe0.2450.1290.025
Central-South Asia0.0000.0010.0000.000
East Asia0.0000.0000.0000.0000.000
Oceania0.8820.2610.4030.1650.0020.354
America0.0160.0480.0220.0010.0000.1090.003

Low P-value

High P-value

Sequence
Sequence SEQ00000018_2.0
External ID ENSG00000183291.11 (Ensembl)
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