SelenoDB
Release 2.0
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Gene Report for SPG00000022_2.0
Identity
GeneSelenoprotein M (SelM)
SpeciesHomo sapiens (Human)
DescriptionThis gene is expressed in a variety of tissues, and the protein is localized in the endoplasmic reticulum. (NCBI)
FamilySelenoprotein M
Synonyms Selenoprotein M (SEPM)
SubfamilyNone
SynonymsNone
Gene IDSPG00000022
Gene release2.0
External ID ENSG00000198832.6 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000071_2.0SPR00000093_2.0SPP00000077_2.0SPS00000021_2.0
SPT00000072_2.0SPR00000094_2.0SPP00000078_2.0SPS00000022_2.0
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.513
Middle East0.7050.496
Europe0.7040.4770.460
Central-South Asia0.6660.4660.4890.465
East Asia0.6470.5380.5800.5410.445
Oceania0.5580.3770.4110.3970.5500.540
America0.4450.3160.3890.3220.2750.3640.549

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.002
Middle East0.0130.237
Europe0.0000.0320.005
Central-South Asia0.0000.0650.0000.002
East Asia0.0000.0000.0000.0000.000
Oceania0.0080.1300.1240.0640.0020.208
America0.0050.0060.0000.0000.0090.2070.009

Low P-value

High P-value

Sequence
Sequence SEQ00000022_2.0
External ID ENSG00000198832.6 (Ensembl)
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