SelenoDB
Release 2.0
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Gene Report for SPG00000035_2.0
Identity
GeneSelenoprotein W1 (SelW1)
SpeciesHomo sapiens (Human)
DescriptionUnknown function. This protein shows highest expression in skeletal muscle and heart, and may be involved in oxidation-reduction reactions. (NCBI)
FamilySelenoprotein W
Synonyms Selenoprotein W (SEPW)
Subfamily Selenoprotein W1 (SelW1)
Synonyms Selenoprotein W1 (SEPW1)
Gene IDSPG00000035
Gene release2.0
External ID ENSG00000178980.10 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000116_2.0SPR00000151_2.0SPP00000124_2.0SPS00000039_2.0
SPT00000117_2.0SPR00000152_2.0SPP00000125_2.0SPS00000040_2.0
SPT00000118_2.0SPR00000153_2.0SPP00000126_2.0N/A
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.302
Middle East0.6480.533
Europe0.5130.3900.272
Central-South Asia0.5980.5120.3610.465
East Asia0.3290.2110.2180.2080.151
Oceania0.4440.3940.4630.4430.3700.413
America0.3430.2220.2600.2210.2180.3080.349

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.638
Middle East0.1420.359
Europe0.0730.1660.476
Central-South Asia0.0000.0580.1270.005
East Asia0.5380.4450.2240.0710.125
Oceania0.1960.0970.0340.0150.3190.312
America0.2860.2200.0770.1000.2080.4240.103

Low P-value

High P-value

Sequence
Sequence SEQ00000035_2.0
External ID ENSG00000178980.10 (Ensembl)
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