SelenoDB
Release 2.0
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Gene Report for SPG00000041_2.0
Identity
GenetRNA Sec 1 associated protein 1 (SECp43)
SpeciesHomo sapiens (Human)
DescriptionRegulates selenoprotein expression. (NCBI)
FamilytRNA Sec 1 associated protein 1
SynonymsNone
SubfamilyNone
SynonymsNone
Gene IDSPG00000041
Gene release2.0
External ID ENSG00000180098.5 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000138_2.0SPR00000179_2.0SPP00000146_2.0N/A
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.400
Middle East0.7920.628
Europe0.6910.5430.520
Central-South Asia0.7280.6130.5810.615
East Asia0.4760.4230.4040.4270.255
Oceania0.5170.3900.4070.4630.4200.503
America0.4500.3670.3960.4280.3820.4200.504

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.120
Middle East0.0000.100
Europe0.0000.0030.001
Central-South Asia0.0000.0010.0000.000
East Asia0.0000.0000.0000.0000.000
Oceania0.0320.1090.0950.0130.1140.229
America0.0010.0070.0010.0000.0000.1940.025

Low P-value

High P-value

Sequence
Sequence SEQ00000041_2.0
External ID ENSG00000180098.5 (Ensembl)
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