SelenoDB
Release 2.0
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Promoter Report for SPR00000440_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesCallithrix jacchus (Marmoset)
Promoter IDSPR00000440
Promoter release2.0
External IDNone
Transcript SPT00000375_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00000440_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Marmoset (Callithrix jacchus) Full length # Forward
CATGCCCAGCTAATTTTTGTATTTTTTTTTAGTAGAGACGGGGTTTCACCATGTTGACCA
GTATGGTCTCAATCTCTTGACCTTGTGATCCACCTGCCTCGGCCTCCCAAAGTGTTCGGA
TAACAGGTGTGAGCCACCGCGCCCAGCCGATTTTCTCGTTTCTTAGTTTCTTCCTTTTCC
TTTTTTTTTTTGAGACGGATTTCTGCTCTTGTTGCCTAGTCTGGAGTGCAATGGCAGGAT
CTTGGATAACTGCAACCTCTGTCTCCCAGGTTCAAGCGATTTTCCTGCCTCCGCCTCCTG
AGTAGCTGGGATTACAGGCATGCGCCATGACACACAGCTAATTTTGTAGTTTTAGTAGAT
TTGGGTTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCCAACCTCAGATGATCTGCCTG
CCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTATGCCTGGCCTTTTTTTT
TGAAACAGAGTTTCACTCTTGCCAGGCTGGAGTGCAATGGCACAATCTCGGCTCACTGCA
ACTTCTGCCTCCCTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTA
CCTTCTAGGTGGCTGCCACCGCGCATGGCTAATTTTGTATTTTTAGTAGAAATGGGGTTT
CACCATGTTGGCCAGGCTGGTCTCAAACTCCTGAGCTCAGGTGATCCACTTACTTTCGCC
TCCCAGTGTGCTGGGATTACAGGTGTGACCCACTGCACCCGGCCTCTTACCCATGGTTTC
TAAACTCTAGCTGTCACTTATGGTGTTACCTACAGGCATACTTACATCCTCATTTGACAA
AGGCTTTGAAGTGACTTACAGGAATATTGTTGTTTTTTTTTTTGCATGCACTTAGGGCAT
AAGGAATATTGTAAAATAAATAAAAGGGGTCACGTGCAGTGTCTCATGCCTATAATCCCA
GCACTTTGGGAGGCCAAAGCAGAAGGATGGCTTGAGTCCAGATAGTTGAAGCTGCAGCGA
GCCATGATCATGCCCCTAGGTTTGAAACCTTTTTTTTCCTTGTAAAATTTACATGCTGTG
AAATGCACAAATCCTTCTAGGGGCTGACTTATTTCCACCACAGATTAATTTTGTGTATTC
TAGAATTTGAAATAAATCATAGTGTAAGGTGTCTTTCTTTTTTTTTTTTTTTCTGAAACT
GAGTTTCGCTCTTGTTACCCACGCTGGATTGCAGTGGGGCAATCTTGGCTCACCATTACC
TCCGCCTCCTTGGTTCAAGCAGTTTTCCTGTCCCAGTCTCCTGGGTAGCTGGGATTACAG
GCATGTGCCACCATTTCTGGCTAATTTTGTATTTTCATTAGAGATGGGTTTCTCCACGTT
AGGCTAGTCTCAAACTCCCGACCTCAGGTGATCCACCCATCTCAACCTCCCAAAGTGCTG
GGATTACTGGTGTGAGCCACCGAGCCCAGCTATAAGGTGTCTTTCATTCAGCTTGTTTTG
GAGATTCATCCACATTGTTGCTGTATCAGTAGTTTCTTTCTGTAGCTGAAGAGTATTGCA
TTGTATGACTATATCAGTATTTGTTTATTTATTCACCTCCTCATAGATACCCAGGCTGTT
TGCTGTTTTTGGCTATTGTCATACTGCTGTGGTGAATATTATTTTACAAGTCCTCTTTTT
GTGTGAAAACATAAATGTATGTTTTCATTTCTCTTAGGGAAACATACAGGCCTGGACTTG
CTGATCTCAGGTTACATCGTGTATATTTAGGTTTTTTTTGTTTTGTTTTGTTTTTGTTTT
TGTTTTTTTGAGACGGAGTTTCGCTGTTGTTACCCAGACTGGAGTGCAATGGCACGATCT
CGGCTCACCGCAACCTCCACCTTCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAG
TAGCTGGGACTACAGGCATGCACCCCCACGCTCAGCTAATTTTTGTATTTTTAGTAGAGA
TGGGGTTTCACCATGTTGACCAGGATGGTCTCGATCTCTTGACTTCGTGATCCACCTGCC
TCAGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCACGCCCGGCTGGCCTGCTCT
GTTTCTGACCAGGGCTGGTTCACCCCTCCTTAGGCTACCTGGTGGTCCCCCGCTCTAGGG
AAGTCACCATATTGATGTTGAACTTAGTGCGGACACCTGATCAGCATAGTACACTACAGC
CCAGAACTCCCGGGCTCAAGCAATCCTCCCACTCAGCCTCCCAAGTAGCTGGGACTACAG
GCACATGCCACTGCACCCAGCAGTTTCACTATATTGTCCAGGCTGGTCTCGAACTCTTGA
CCTCCAATGTTCTGCCCGCCTTGGCCTCCCAAAGTGCTAGGATTACAGGCATGAACTACC
ACACCTGGCCTGACCATGTCTCTCTTTTTTTTTAAGACTGAGTTTTGCTTTTGTTGCCCA
AGCTGGAGTGCAATGGCACAATCTTGGCTAACTGCAACTTCTGCCTCGCAGGTTCAAGCG
ATACTCCCACCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGCACCACCATGCCCAGC
TAATTTTTAGTAGAAACAGGGTTTTACCATGTTAGCCAGGCTGGTCTCAAACTCCTGACN
NNNNNNNNNGGGCTCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGTCCAAGGCAG
GCAGATCACCTGAGGTTGGCAGTTTGAGATCAGTCTGACCAATAGGGAGAAACCCCATCT
CTACTAAAAAAAATACAAAATTAGCAGGGCGGGGTGGTGCATGCCTGTAATCCCAGCTAC
TTGGGAGGGTGAGGCAGGAGAATAGCTTGAATCTGGGAGGCAGAAGTTGCCGTGGGCTGA
GATCGAGCCATTGCACTCCAGCTTCGGCAGCAAGAGTAAAACTCCATCTCAAATAACAAA
TAGTCGGCTGTCCTGAATTTAGATCCATACTTTAGCACATACCAGCTATGTGATTTGGTT
TTCTTGAGACCAATCTCACACTGTTGCTCAGGCTGTAGTATGTAGTACTGTGGCGTGATC
TCGGCTCACTGTAATCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAACTTCCTGA
GAATCTGGGACTACATCCTGCGCCACCATGCCCAGCTAATTTTTTTGTAAATGAGTGCTT
GAAACTTGTGCCAAGTTGTGTTCAAAAAACCTCTATCATGCGACCTCCAGAATTGCACAC
ATAGGTGTACATATTGGATATGATTCATTATTAATTTTCTTCACTGAAATTGTGACAATG
TGTGTATGCAGAATAAGGTCTTATTTTCAGGAAATGGATTCTGAAATATCGTGTACTGAA
TTAACTATGATGTTTGTAAATTATTGTCTTATCATCGACACATGAGTAAATCACATACAA
CTCAATGATAGTAATTGTTTAATCTGAATTTTGAGAACATAGATTTTCCTCATATAATTA
TTTATATGATTTCTGTTGATTTCAAGATTTACTTAGTATAATTTGGGGTTAGAGAAAAGG
CATAGATCCCAGGCTCTTTTAGCTCCTTTTCAGAGAGCATCAGTAATTTATATCAGGCGA
ACAAANNNNNNNNNNTAAAACTCCATCTCAATAACAAATAGTCGGCTGTCCTGAATTTAG
ATCCATACTTTAGCACATACCAGCTATGTGATTTGGTTTTCTTGAGACCAATCTCACACT
GTTGCTCAGGCTGTAGTATGTAGTACTGTGGCGTGATCTCGGCTCACTGTAGTCTCCGCC
TCCTGGGTTCAAGCAATTCTCCTGCCTCAGCTTCCTGAGTAGCTGGGACTACAGGGTGCG
CCACCATGCCCAGCTAATTTTTTTGTAGTTGTAGTAGAGATGGCGTTTCACCATGTTGTC
CAGGATGGTCTCTATCTCCTGACCTCCTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGG
GATGAGCCACTGCGCCGGGCCTACATTTAAATTTTTATAATTGTCCCCACAATATTGATA
ATTTTTTTTATTTATTAGTGAATTATAATGCAATCTAGGAAACTGCATAAGATTTAGTTC
TGAGTTTCTTAATGTACAAAAGCCAAACCTCTTTCTTTTCTCATATTGTTTAATTTTTTA
AGGAGGTAAGGCTAGTTGTCTTTATATAAGATCCTACATTCTGGATTCATTGTGTTTTAC
ATAGTCTATTCATAAAATTTCCTGGAAACTGGATCTTTGATCTAAAGGCTTGATGAGATT
ACATAAAACAAGTTTGGCAGGAGTATTTCACTCATTATAAAATGCATAAATAAATGTTTA
CTAAATAAGTCTGGGGCCAGATGCTGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGG
TGGAGGTGGGTGGATTACTTGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGCAAA
ACCCTGTCTCTACTAAAAATAGGAAAATTAACCAGGCATGATGGTGGGCACCTGTAATTT
CAGCTGTTCAGGAGGCTGAGGCAGGATAATTACTTGAACCTGAGAGTCGGAGGTTATAGT
GAGCCGAGATCCAGCCAAGATCCAGCTCATAAATAAATAAATAAGATCAATGAATCTTGG
ATTGGCCCAGATTGGCAGTCCTTATATTCAGGTTTGTAAGTTAGGTCTGAGCTGGGTTTT
GGAGGGAACAAAGTCAGTGCTGACTCAGATTAGAAAACCATTTCTTTCTCCCTTCAAGGC
TAACACTCATGTTGAGTCTTTTTATTTTCTTTTTTGTTTGACACAGAGTCTCAAATCAGC
CTGTTGTCCAGGCCGGAGTGCAGTGTGGTGTGATCTCCACTCACTGCAATCTCCACCTCC
TGGTTACAGTCTCCCAAGAAAGCTGGGACTGTCCCAAAGTGTTGTGATTATAGGTGTGAG
CCATCGTGCCCGGCCTCATTTTGAGTCATTTTATCTTTAACATTTTCTTATTTTCTTTCT
CTGTTTACTTTTTTTCCAGG
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