SelenoDB
Release 2.0
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Promoter Report for SPR00000624_2.0
Identity
PromoterMethionine-R-sufoxide reductase 3 (SelR3)
SpeciesCiona intestinalis (Sea Squirt)
Promoter IDSPR00000624
Promoter release2.0
External IDNone
Transcript SPT00000559_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00000624_2.0 # Promoter # Methionine-R-sufoxide reductase 3 (SelR3) # Sea Squirt (Ciona intestinalis) Full length # Reverse
TCACTTTGTCGTAGAAGCGACCTAACTCTACACACCGCCAACAATCTATTTTCGTAAAAC
AGCCGACCCGTTGCGAGTTAATATTTAAGCGCAACTGGCATCTGTTTGTAAATAGCTAAA
AGCTGCAACGTGTCTATAGCTCAACACAAACATATATATATATATGTGTGTGTGTGTGTG
TTCTACTAGTTCCAATTCTTAATTTCACTCCAAGCATTATAAAACTCAATCGATAGCGCA
AGAATATGAAATAGAAATAGCGAAAATATACTGCCACAAACTTGGTAAACAATGCCATTT
CTCCTTTATACCCTGGTTTGGTAGTGAGACACCACAAGCTATACAACTCCATTCAAGCGT
TTCCTGAACGCCAGCTTGCGTAACAGTAGTAACTTCCCAGGGTAGTTTGTATTGACCAAA
ACCATATTACTACAACTAAAACTGTACATTCGTAACATTAGATACCACCGGGCTAATCAG
TTCAAGTTACATGTATTCGGCCCAGGCTTATTGTTGTAGGCGTATAGACATCTACACCTC
CCTTTGTAAAAAGGTTAAAAGGCATATAGTTCTGATACGGGCACTTTTGGGCACGGATGT
ACCCTTCGTATATAATTTCTTTTCTGTTTAAGCAGTTGTACCATTTTTGCGTTGTTGGTT
TTCTCAAAATATAACTATAAAGCAGATTTTAAAATATAACTGGAATCTCTTGTTTGGTCA
ACTAAAACTGTTGCATTGTGGCTTTGCTTTTAACCCAAAGGTCATAGATTACATATAGGG
TACCTCTGAGTCGGACACGAGGTGTGTGAAGCAGAACATCTATTTTAAAACGACAGTTGC
TGTCCCATCACGCTAGGGTAAATAATAAGTTACATTCATTCGACCGCTAGGGTTACGAGA
AAGCCCTTACTAAGCTCAAAAGCTATAGAACCAAAACCTTATTACTGTTTTTTTTTTTAC
ATTCAAATTTGTAGTTTCGTTTTAAGTGCGTTCATATAAATACAAATGACTTGATCCCCT
TCCATTTTGTTTCATACACCTTGTGCCAGCCTACGAGTTATCAAGTTATTACTTAGCGGA
TGATTATTGTAGTGCGGATTTTTTTGTTTGTTTAATATGTGTTTATTTCTTATATAAACT
ACGTTTCTTCGATTGTTTAGTTACGGTATAAATTTTACTGCTCGAAGGAAACACCGTTAC
TAGTGCATTAGTTTAATCGCATTTTACTTCTTTTGTGTGGTAGTATTTTACCGCTACCTC
GTCTCGCCTTGATAACATTCCGGCGCTTTTATTCCTGCCGCCCGCGCCGAGTAATTAACG
CTTTTGTTGTGTCGTGTTTTGCGCTCAGTCACCAGTTAGTTTAGTTGGTAGTTTTGGTAC
TGCAGTATAGTTATGTTGTATAGAGTTTCCTTAGGTTTATTATTATGTATTGTATCGTTG
TTATATATTTGTAGATATTCATCGTTTTAGTTTGTTAAGTCCAAATATAATAAGTTACTT
TATCACATAAAGTGAGGTCGGGACACTGCTCTATAACGGCCTACCGCGACGGACCAGACT
GGTGTAGGATTTCTTAACAGTTTAATGACAGAAACTATTATATTAATAATAAAACGATTA
GAACGGTACGGATAATGATCGAATACACTAATGTTTTGACCACGATTATGAAATATACCA
ACGTTCTAAACACGGCAATTTAATACACCAACGCAACGTTACTCAACCATACCCACAACA
AGAACTGCTAATCGTATACAGTACTCGGGCGTATGTAGGAAACAGGAGAAAAGGCGCACT
CGCGCCACGACGACCAATCATGCCCAAAGGTGGTTTAGCGCAAGACGTATCAATACAACA
GAAAACTCATTAACAAAAGAAGCAAAACCAGAAACAGTGCAGAAATACGCCACAGCAAAC
ACAGAAAGAAATAATACGTCACACTTTTGTTTCCCTGTAAATCTATCACCAACCTTTCTG
TGTCATGTCTTATACGCCCATAGTCTGCAGAGTTGCAACTAAATAGTATAGGGAGGGGAA
ACGGAACACCTTTAGCATGAAATATCCAAATATCCTGATCGTGTTTTAAACAACTAATAA
CGGTCTATGTGAGACATGAGGTTTTACAACTATTTGAATGTTCGTTGTTTACTACCAAAT
GAGACCGGAAAATAAAGTAAAAAGTGGCCCATCTATACCTTACTGCTTACTATAACTGAA
ATATCCGTAGCCCGTTTAAAAGTGGTTAGGTTTATTATTATTTGTAAAACTATTTACAGC
TAAAGGTTTGACAGCAGTTGTAGCTAAATTCACCAGCTACAGTGGAAACGTACACAGTGG
AACTGGCCTTCTGTAACTTGGATCCACGTCAAACATCCCATTGTGTGTTCTTGGAGGTTT
AATAGCAACATCCAAAGCTAAACTGCCGCAGACAGGTTCGTTTATGGGATGTCCTGGAAA
ACACTTCACATAACCACTGCTCCCGTTGCGCATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTTGTATACGATCCA
TGATACAAGTGGAATTCCCTATCCTGTATATTGTGACATGGAAGCAGACAATGGTGGCTG
GACGCTTGTAGCTTCTGTGCATGAAAACTACATTGGCGAAGGGGTTGGTAGATGTACAGT
TGGTGATCGATGGTCGAGTCAGCAAGGCAGCTCCCCGCTTCGACCAGAAGGTGACGCTAG
CTGGCAAAATTTGAATACTTTTGGTCGTGCCGTGTCGGCAACCAGCGATGATTACAAGAG
CCAAGCTTACTTTGAATTGCAAGCCAGAGATGTGATGGTTTGGCAAGTACCGAACGACAC
TCCTTTATCTGAATTTAGTTCTGAGGCTTATCTCAAATACCGAACAACAAATGGTTTTTT
AACACGCTATGGTGGTAACATGTTCAAACTTTACTCTGTTCATTATCCCGTTAAATCTGG
AGTCTACACTTTCCCGACAGACAGTGGTCCAAGTATACCGGTCGTATTTGATCAAGGATC
TGCAACTTCACTTTTAGGTTACCTGCCCACAAATGCTGTCCCTTCCATCGAAGCTGGATA
CATACAAGTAAGTATAGTATGGTGGGGGAAGACGGTACACCTTTAGTACATAATATCCGA
ATATTCTGATCATGTTTTAAACAATTATAACAGCGGAAGAAGTGAGGATATTTTATAATT
CTTTGAATGTCTTTTATTTACTACCAATTGGGACAAGAAAATAGAATGATAGGTGTCTCA
CCTTGCCCCACTCTACTAAATACTTACAATCATATATATATAGAGTGTTTTTTTTTACTA
CAATGCCACAAGCCACGAAAACAATGACAATCTACAGCGGGGCGTTTAAAACTATAGACC
GACATAACTTTTCTTATTTGTCCACAGTTTCGAGCAATAAGCGTGCACCAAGACGCGTTT
GCATCCTGCCCTGGTGTGCGAAACAAGCCATCATTTAACTATCCTTCGCAAAGCTGCTTA
GGGTCTGCTGGTCGCACTGAGCACAGTAACATCCTGTGGTGGACTTTTCCGGCCTTCTGC
ACAACGGTCATGCAGCAGGGTCAGCATGGAGCGCTGAAAATACATTACTAAAATCTTCAT
TCCTTATATTTTATCGTTAAATATAAATACAGCATGCACAAAGTACACATTTCCTATATA
CCATTGTGAAGATTATTTGCGTATGGAACCATAGTTCATTTAGAATTCATTCACAGATGC
ACAGAATATTTGACAGGTACTGAATGATTTAAGGATAAAACCGGGCGTTGAAATTGAAAC
AACTTCAACAGACCTTGACCATGTTATATATTCAAATAACCCCAAACGATTTCAGCTGTT
TATAAAATATAAGAAACTGTTTACAGAGGCTTTACTGTAAAAATATACCCGTGCCACGAA
TTTTCTCTTCAACACGTCCTTTCTAATCCAAAACGCGACAACCTCATTAAAGGAGCACGA
ACAATGGAGAACAAATAGACAACATTTTTTTCAGCCGCCGCCATGTTAAGCTAGAAATCA
CTCTAATTGATGTCGCGCAGCAGTATCGACCGGCGCACGGGTGCGAATTTATTTAGGACT
AGCCGACAAAGGCGGATATATTTAGTCCGAACCGCCATAGGTTTATGGTCTGATCTGTGT
TGCGCAAGCTTCCGTCATCCTGTGAAAACAAAATGTCGCTAAGCGGATGTTTCTATTTCT
GAGAGGATTTATCCCAGCAGGGGTTCGATTCGAGATGACGTATTGCTTGAACCATACGTC
ATCTTTTTCTTAACTACTTTTCTTCACTTGATTGCGCAACCCTTAATTTTCATCAAATGT
TGGCATTGGTTTAAAATAGAAGGAATTTTCTTCTTTAAGCCTGATGTATCGACTAAAAGC
ATTTATAGAAAGGGTTGGAATAATTGACGCTGTTTACACGACGAGCGATAAGCGTTGCAC
TGACTTCAAGTGCTTGTGGCGCTAATGGTCATTGCCAGGGTATCGTTAACGAGTTAACAC
ACGGTCACTTGTTTTCAACAATGGAATAACGCATTCGCTTACACAGCTATGCTAACTGCC
GTTGCCTTTTAATGCGCGCAACGCGTTACGAAAGCTGACGTTCCGGCGCCCGTCAGTCAA
AGTGATTGACAGTCTTTTCACTTCAGTTCGGACGACCTTATGCGTTTCAATGTAAACAAG
TCACGAAACGAAGTGGTTGCCCGGAAATACAAAGTAACAAGTTTGCCCGACTCCAGTTTA
TTAGTTTCCTGTTTGCAATATTTGGTCAAAGAATCCGCCTCGCCCCAAAACGGGACCCTC
TCAATCTTTTTGGAGCAGTTTAAAATTTCTCCAGGAACGTAGCTGTTGACTTAAGAGAAC
GAAGCGACATTTCGGCAAAATACACAAGAAAATGCGATGGTAAACCTGTAGCAACCGACA
GGGAAAGTGGAGCCACCTTC
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