SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00000711_2.0
Identity
PromoterSelenoprotein U (SelU)
SpeciesDanio rerio (Zebrafish)
Promoter IDSPR00000711
Promoter release2.0
External IDNone
Transcript SPT00000646_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00000711_2.0 # Promoter # Selenoprotein U (SelU) # Zebrafish (Danio rerio) Full length # Reverse
TAACTCACTCTGAACACTGAGACCTGCACATGCACTGCTGTACCAGTGTGTGTTCGATGC
TCGAGCCGCTCACGAGGTCTTTATGGAGCTTAACTCTGGGAAGCTGATCTGGGTCCAGCA
CTTGTGTAAGCTGGGAGGAGACTGACCTCTGTTCTCAGAAACACTCGCTCTTTATGCCCT
GATTTCTCACGCCATTATTGTTTATCGTCCTGCTGATAAACCAGAATCATTATTCATGGT
TATTTATTTTATGGCTGTTAAGGCATTTTAAGTTGTTGCTAAATCATGTTAGAAGAAAGC
AGATCTGCTGTGTTTGTCGCCCGTGTCAGCACTAGACATGATGACTGAAGACAACTTTGA
TGAGTTGCTAGCATAATGTAGCACTGCTAGCATGAATAAGCATGTTTATAGTGGTGTGCA
CACACACACACACACATGCATACACAAACAGAGAGAGACACACACACACAAACGCACAGA
GAGAGACTCACACACACAACACACTAATACATATACACACAGATACAGAGAGATGCACAC
ACATACACACACACACACACACACACACGCACGCACATGCGCAGAGACAGACAGAGAGAC
ACACACACTCAGGGACACACAGAGAGTGGGAGACACACACACGCAAACGCACAGAGACTC
ACACACACAACACACTAATACATATACACACAGATACAGAGAGACGCACACACACACACA
CACACACACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACACAC
ATACATACTCAGAGAAACACACTCACACACATACTCAGAGATACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
ATACACACACACACACACACACACATACTCAGAGACACACACACACATACATCCTCAGAG
AAACACACACACACACACACACACACACATTGGAACACACTAACTCACAACTGTATCATG
TTTCTAGTGGTTGTATCTAGAAGTGATCCAGCATTTCTTCTGTTATTCATCAAATATAAA
GCTGCCGGCAGTGATCAACTCTTTTAAACGCCTCTGTTCTGGAATGAATGACATCAAGTC
ACCATAAATGTCATGTAATATTTCATTTAATTAAAAAAAAATCATTAATTAAAATCCATT
TAATCGTGTGAATTTCCACATGGGAAATACCAAAGTCAACCCAATCCTAATGTCAGGTTT
GTGCAACACACACACACACACATGCTGTTCTGAGGTCAGTGATGTGGTGTAGTGTATGCT
CAGTCTTCCTCCTCATCCTGCACACAGAGCAAACAAACATGAGCAGTGTATAATCATTCA
CACTCATCTCAGCAGCGTCAGCAACCCAGGCTCATGCTGAAGCCGTACCCCTGTGTACAT
TTCTGGAGAGCGCCAAATACTTTTTTTTTGCTGTTTTTGTTTTCATGAATCCACCAGAGG
TCACTGTGTACTCTTACAGATCTCAAATTTCTCTCACGATCAACATTATGAAGCTGCAGG
CCCAGAGACCCAACTGCACGCTCAGACGGCTAGATCTGCACTTCCAGACCTATCGCTTTC
TTAGACAGTGCCACCTGCTGTTTGAAAGATTGCCTAACCTGAATTCAGCTGCTTATGAAT
TGTAACTATTTTTCTACTGTAAAATGTTACGCTATAATTGAATACCTTATTATATAAAAT
ATTAAACACTAGATTTTAATTTAATGCATTAATTCTGTTGTATTTATATTAATTGTATTT
TTAAATAGATATTGTTCAGTTACCTCAATATTGTCAGACATTTATTGTTGTTTTTTTAAT
CATTAAGGATTTATCACTGTTTCGTATTGAGTTGAGGGAATGAATATTATCTTCATAGAC
AAAACAAACAAACAAAAACAAAAAAAAAACTGTGGAAATATCTGCAGTCTTTGGTGCATT
GTATTAGTGTTGGCAGAGACCCGCCTTTTTAAGTTGTAATATCAATCTGGGGAAAAAATC
CACAAGTCACAAGCAAATCATTTTTGCTTTAACCTAAGAGAGCTCATATTGTAAATTCTA
TGCAGATTACCTGATATTTTGATTTCCAAAAAAACGTATTTGTAATCTTTACAGAACTTA
ACAATTGTTAAACTGTTATTGTGTTTCTGTTATTGTCTGTGCTTGCACTTTCAGATAGAT
AATACAGTAATATGTACAGTAGACCTACACAGCCCTAAAATATATAACAAATAATAATCG
TGTTATATATTATACATTTTGTTTGAACATTTTTACTTTAAAGTTTTTTATTTTGCCAGA
AAAAAATTGCTAGAAAAGTGTCCCAGAATGGCACAATAACATCGAAAATATGAGCAAGCT
GAAAATATCATAAAATAACGCTATCTTTTCACACTAATTTTGATTCAATCAAACAATGAA
ATAATAGTTTGTAAGAGTAATATTTTGTCCCACTTTATATTAAGTGGCCTTAACTAATAT
GTACTTTCACAGGAATTAATAGTTTGTTGCAATGTACTTATTGTGTAAATACATGCATTT
ACTGTGTACTTATGTATTTATTTTTTTATGTAAGTACATAGTAGTTAAGGACACTTAATA
TAAAGTGGGCCCTAATATTTTACAGCACATAATTTATGCAATAAAACCTGGTCATTTTCA
GGAATCGCTTTAGTAAAATCTATAACGCGTGTCTGATGTTGCTACTTGCAAGAAAGTGCT
GGTCTGAGCGTGCAGTTGGGTCTCTGTACTAGCCACTTCACCCAACCTAACAGCAGGTGG
CACTGTCTGAGAAACAAAAAGTCTGGAAGTGCTGTGGACTGACTGACTGATCGACTAACC
CACCCATCTCCTTCCCTAAACCCAACCAATAGTGTTTTCAAAAGCACCGACTAAATCCCC
CACTTACTTCCCTAAATCCAACTGATAAGTTTTTAAAAGCAATCCAGAAAAAGAAAAGCG
CTCATTTGATTTTTACCGTTAACACTCTCACCCTGTTATTTACTTGTTTATTTTATTTTT
TGCTTTCTGTTTTTACCCGCTTTCTGTAACCGCTCTTCACCAGGCAACTAGAAGAAGTCG
TCGCGATAAACTCCTCTCTGCATCTCAATTCCACCCACGTGCATGGCGAGCCACTGGGCA
AACTGGTAACAGTGGGAAAGCCGTCCATACGGAGGTAAGCAGTTAGCTGGTAGCGCGAAA
ATGAACAGCGTCATACCGCCCCGTAGCATTCATTTTAAAGACGAAATGCAGCCATGAGTA
CCTCTGGCTACATAAATAGTGATCTCCAGAAATGTATATAGGGGTACATTTTCAGAATGA
GCCTATGCTGAGTGTCAGTGCAGATTCACCTGTTCTCCAGCTTGCCCCGCTTCCTCCACC
GCTGCCGTGTCTTCAGTTTCAGCTGTGTGTGTGACCTGTCAGGAGAGACAACAGGCAAAT
CTGATTATTACAGCTTTTTCGAAAATGTTTAGACATTAAAAGTGATAACTGAGACTCAGG
GTCTCTAGTTCGATTCCCCGCTGAGTCAGCTGGAGTTTCTGTGTGGAGTTTGCATGTTCT
CCCCGTGTTGGCGTGGGTATACTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAACACATG
CGCTATAGGGGAATTGATGAACTAAATTGGCTGTAGTGTATGGGTGNNNNNCANNAATGN
NNNNNNNCNNANNNNNNNANNNNNNNNTNNNANNNNNNGNAAANNAAANNAAAATGANNA
AAAAGTNGAATTTANATTTGTTATGAATGAAAGTACTGTAAGAAAAATTAATGAACGAAT
TTATGACTTAAAAATGCTATTTACTGTTTTACAGTTTACACCTCAGAAAAACCAGAAATC
ACAGTACTTGCTGCCTAAGCTAACCTACATAGAAAAACAGTGTCATTCAAAAGACATTCT
ATTACAATAAAAAGCTCCAAAAAGATCCTAATTATCCTTGATGTGGTGCTTATAAAATGG
CCATCGAACATGCTTAACGTTAATTTTAAGCATTCTTTAGCCTCAGCTGAGCACAGACAT
TTCTGCCTGCATCAAACAACTTATCGGATTGAAGTAATCACATGCTCATAGTAAATTAAC
GTCATTTGCTGTTGAATGTACAACTAAGTTAAACAAAATGTAGCAGAGCGGAACGTTTAT
GTGTATGTTCTGACAAAATACCATCAAATTAACGCTAGTAAAGGAAACTTCGCTGTATCA
AAACCGTATCGAACATAGTAGATTTAGCCGTATCCATGGGCGCAAATCTGATTTAACAGT
AGGGGGGGACAATACTGTAAATATAACATTTCTTTTGAGCATTTTTTTGGAGGGGACACA
AATAATACAGCCGAATTGTACTAATACATATATGTTAAATATATGTTCCCGAGATGAAGA
AGACATAAAAGCAGTGATTTTTCATATTTATGTAGGCTAGAAAATGTTTTGTAATATTTT
AATCCTTTATATTTATATCCTGTATATATTCTTATTATATCCTATATATATATCCTTAAT
ATTTAATTTTTTATATGTAAAGATATTTGCCTGTTGCTCTCTTGTGCGTATTAAGCTCTG
TGTAAGCGAGGCGCAACTCTGCGCCGGAGTTTAGACCGGGTTAGTTTTGGTCTAATGAAA
AATCTATTATAGTTTCTCAAAATAGCAACGCGCCAGCGTCCGCCTCTGAACGCCTTCCTT
TTTAGACCAGAACGCCTATGGGCGCACATAAGAGCGCTAACGCATTTACTATTTAAACAG
CGTAGCGCAACGCCTCAAAACGACTCTTGCGCCAAGCTGAAACTACCAAAAGACTATTGC
GCTGCGTCTTGCTCCACACTGCGCCGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNN
Chart Advanced