SelenoDB
Release 2.0
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Promoter Report for SPR00001142_2.0
Identity
PromoterMethionine sulfoxide reductase A (MsrA)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001142
Promoter release2.0
External IDNone
Transcript SPT00001077_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001142_2.0 # Promoter # Methionine sulfoxide reductase A (MsrA) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
TTTCTGTAAATCAAAACCGTGGGTAAACGTGAAATTACATCTTGGCACCGTATTTCAACA
GCAGAAATTATAGCATGTGTGCAGCGGCCCCTCTAGCGGCCTCGGCTTGGCCTCATAGCC
CTGCCCTTCGTTATAGGCTCACCCGGGCCAGCGGATCAGAGGCCTCTGATGCTGGAAGAC
AGTTAAGAGATTACGCGGCTTTGACCGCCCTTCTACCCCTGCTGTCCTCTCCTCAATGGC
CACAACTAAAACACTACCACACAGTTATTTCCTGATATCGCTCGTACGCGTATATACCTT
CAAATGTGAGTGTATTAAGTGCTAAGCTTGGCCCCCTTGGGTGCCCGCAAAGAAAAAAAA
CAACGACGGCACTTCAGGGCCACGCGCCCGCGTAACCTCTCGAGCAGGGGAGGGCCTCGC
CAAGTAGACCCGATGCTGTCCTAATCTCCACTGCGTTAAAAATACTCGATAAGTAAAACA
TACCCAAGTGCTGAGAGATGGCAGGGGGGGGAGAGGCACTCTCCTGCCAACTGTGGTGCA
TGGAATTAGAGCGCTAAAAAGGAAATTAGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCCA
CAGATGTGTGAGGAGGATTAGGATTTAAGAAGACTGAGTTGACTTAGCGTGCAAATCTCC
ACTAAGCAAGGCTGGTTTGTACTGCAACTACTAATATTAGTCTACAGATAAACAGGCCAC
GGGGTACACTGGGAGCTTAGGGACATACTTACAATGGATGCTTGCTTTAAGTTCAGCATG
TGATTGGTCTCTGGCCGCTGAGAGATGCGATGTGTGACATTGATCTGAATACCAACAATC
TCTAATTTGATTGACAATAGTTTATTTGCTAGATAGGCCCGAGATGATCTAATGTTCACA
GGCCAAGAACCAGCAGGCTGCAGTTTATAAAAGACGGAGAGATTTCTGTGAAGCCGAGCA
GAGAAGCACTGAAAAGAGTGCAGCGCCTTGACCTTTAAGATGAACATACATTTACAAGAA
TACAGAAAGGAAAAGAAGCATCACTAGGGAGACTCCTTGATATTAGACGAAGCGCGTTGG
TTTTTCCTGCACAGAAGCAGAGTGCAAGAGCACAGAGGCCTGGGCTGCCTTCATGGCAGT
CACTTCCTGCACTCCCGTTGAGCAACAGTTCTGTGTTTTACCAGCAGGTCGTTTGACTCT
GCCAGGTCACGTGCACAGTCAGCTGCAAAGAACATCCGTGTCGGTGACTGTACTAGCGAC
ACATTCCCAGTCCACGTGGTCGGCAGAAGGGACAAATATGCATCGTTCTTCTGTGAATTT
GATTACTCTTAATCCTCTGCTCGCTCACTCACCCCCTCTTGTCCTTCATATTTTGGCCAC
ACTGACAAAAAGAAGTGAAGTTGCCAAATGACTGAGAGAGAAAATGTGAGAGAGAGACAA
GTGTGCGATAGAGGAGGAGGAGTGGGAGGATGAGAGATCAGCCTGCCAAAACAATAAAGG
AGTAAATAGCCAGTGAGAAGCAACAGATGAGGGTAGCAGAGAGAAAGAGAAAGAGAGAGA
GCGGGAGAGTGAAGGATTCTTTTGGCTTTCGGACCCCCATGCCTTTGGGCACTGAATAAA
AAGACCAAGCACTTCATCCAAGAGAGAACACAGAGAAAACAAACAAATAAACAATAAAAA
GAGATAAAAGTTGAAGACAGCCAAGAACACGCCGACACAGCATTGGCCAGAGAAGCCAAC
TACGAGCCCCCCTCGCTCCACCCCTCCCTCCCTCCCGCCCCACTCCACTAACTCAGCTAC
TCTCCGTCTCCGGCTTCACACCCTCTTGCTCGCAACACCTTCCCATCATCCCTCACTCCA
GCCTAACAAACACGCGGACACCCTCCTGCACGCCACACAAGCACGCCATCAGCTGCACAA
TCACTCGCACACAGACCTCTGCTGAGGGTATTCCTCCCATGGAGCAGCTGCCAGAGGTCC
AGGTGGTGCCAGGCTGGCTCCTTTCACTCTGCCTAGCCCGGTACCCCCCCCCCCTCCTTG
CTAGCCCGGCGCCCACACCCCATTCTGACAGAATTACCCCACCTAACACAGAAAGAAAGA
AAACTGGCTGAATACCCTCACTGCGCTGCCGCGCTATGCCAGCAAAAGAAAGAACAGAGG
ACGACCAAAAAAAAAAAAAAAAAGCAGGGAGGGTGACTGACTGGGTTTACAAAAGAAGAA
GAAACAGGCTGAATATGGGGGAAGGATTCATGAAAAGGATTTTTTCCCCAAACTTGGATG
AAATATGGGCGCAATTTGTTTTGTACTCGTTTTTGAGGATCTCTGGAAGGCGCTGTGCAG
CCTATACAGTACGCCGGGATCGAAGCGCAATACTTTGGTCAGCTATTGATGCATTGAGCA
TGCCGGTTGTGTGCGGCAGGACCAGAAAGAAAACGCTGGACTAAACCCCTGACCCGCTCG
TACCACGGTTACCACCAGTCAAGGGCACAACAATCCGTTGCTCAGCGGATAACAACGTCC
AGTTTGAACTGTTTGGGATTGGTATTTAGTCTTTGTTACCCTTCGATCCTACCCGTGGTC
CTGTGTTTCTCCCCGTAAAACCGAAGTCCAAGAGCTGCTGCACCCTCATGTAGAGACACA
GGAGAGGTACTATCCCTGGATGCCAAAAACGGTGACGGAAAGGTTGATTTCCAGGCTGCT
CAGTTTATTTCCTTCCAAAAATCCATTCTCCCCCCCCCCCATCTCTCTCTTCCCTTTCCC
CTCCCTCTCGCTACTCCTCTTTCTAGCTTCACACAGGTTGGCAGAGAGTCAGGCACGAGT
TGTCGGAGGGGGCTGAAGCTTTATACCGGTGCCAACTAAATCTGCTGTATGGGAGCCTGG
GTAGGGACTAGAAAGAGTGGGCAACATGAGGGGAGGGGAGGAAAGAGGCCAGGCTGGGGG
GAACGTGGTTGATTTTAAAAACAGTAAGAGGGGAGTAAAGTAAATAATCTAGCTGTGGCC
TAAAAACAACCCAACTCGGTAATAAGAACTCACACACATTGATAGTTGCCATAGTTGTTC
AACTTTGAAGCCATCAATGCATTCCATACATACTGTATCCTAGCAACGGAAACAGTTGCT
ATGGAGAAGTCTACCTACTATAGCACTGGCTCCATTTTCCTCTGCAAGGAAGATGGAGGC
ACATCCTGTCGGCGCCTGCACAAATATGTTTACTCAAACATTGATCTGACGACGGACGAC
GAACTACTTAAAAAGTCAAAAGACATGAAACTGAAGACCGGGTTTTAAGTCTCTGTTTGC
AGAGATTCCACAGAAAATCGAATTTTCTATATCATTTACAACCTCCAGTGTCGGAGGGGA
GTCAAACCGGTCTGCAATGGCAAAGAGGCAGGATCCAGTATTCAGGGCCTCCAATTCACC
TTAACTGACGGCAGTATGGAAAGTGCAGCTGAGAAAGGAAACCACCACAGACAGTGGGTG
AACATACACAGTACAAAAACAATCAACATTTCAGGTTGGGTAACAATGTTTTTTCACTAA
ACCGTACTTATCATTTAGCAACAACGCCGTCCCAGCAGAGCAAACCCCTCTATCTATTTA
TCTACTGATTGTGTGCCTAAGTGGCACGCTTTCCAAATCTCTTACATCTTTTATTCCCCT
CTGAGCTTATTGCAAAAGCCAAATAAACAAGGGCATCTTGAGGCAGCAGAGATAGGAAAG
AACAAAGCGTCAACGCCAGAAATATATCTTCCCAATGAACCTGCTTTGAAGAGTTATAGC
AAAGCATGTTACAGAGATTGATTTTGGTCAGCTGACCTCCCCCATCCTGTTTGGAAGAAA
TATTGGCAGTCTATCCTGCACTGACTCAAAATAATAGCGTCTGTGCCCCTACCATGTAGC
AATCTGCCACTGGATCATTCTCGCCAAGGTCATAGAGTACGTCATACGGACTGCAGGGAG
GGAGGGAACGCAGGACACCGGGACGTCTGAACAAGGAACTTCTTTAAAGATGGAAGAGGC
GACTTTCAAAATGAGTGATCGCAAAGAAGAGACAGAGGACAAAGTTGTGCTCCCACACGA
GGCTGGGACGACACAGGGCATATGTGGAGCCAGTCCTTGCTGTCCTTAAATTACTCATGC
TTATTCCAACACACACACACACACACACAAGAACAAACCCCGTCCCAACCTAAGCTGCCC
CCCATGGTGAAAGGGGAGGAACAGATTTCTGCCACGCGGCGTCTCCGAGCTGCTCCGACA
GACGGAGCAAGAACTTACGGCGGGGTGGAGCCTTCATGCGCATAATGCCCAGATGGGCCC
CTGGACGCTGCGGCACCACTTCCTCCTATGCAATCGCGCCCAGCTCCCACAATGCACTCT
GTGGACGTCTCAGCCCCAAGTAGGTGAAAACAAACAAGAACCCCGGTTCAAATCGCACCA
TGTTTGGCCACGGCGGCATTCTCGAGGTGCGAGCCTCGCCGTCCCTAAATAGGATGATGG
AAAGTTGAACGAAAGGCTGGAAGCAGAAATTACTCAGCGCCACATGACAGGTAATGATGA
GAATTTAAAATGGGACTAAAAAAAGAGAAAGGGCGCACATGTGAAAATGCACTGAAACCC
AGATATGACATTTTTTCTTAGGTTTTCTTAACTTTATAAATACTGAGCACCACTGTATGT
CTTCGCAGTCACAGCATACAGTGGTACTTGGATAGACAAATGTTACATTTGAATAAAAAA
ACACTTGATAGTGTACATACGATGAATAACAGCTCAACAACACCTGACCACGTGACGAAA
ACTCCATTTCCTGCCATTTCCGTGTCACGTTGGCTTCTCCCGAAGTTCACTCGCTTGGTG
TTCATGACAAGCGCCACAGTTTACCCAGCTGTCAGCTCGGGCACATCTCCATCACGCCGG
AATACCAACTTTTCAGTTCGCGGCGTGGTGTCGTTTACCTGCCACGACCCATTCTGTCCT
TCCTTCCCTTTTCAGCGCCC
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