SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00001143_2.0
Identity
PromoterSECIS binding protein 2 (SBP2)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001143
Promoter release2.0
External IDNone
Transcript SPT00001078_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001143_2.0 # Promoter # SECIS binding protein 2 (SBP2) # Stickleback (Gasterosteus aculeatus) Full length # Forward
GTCGGTGGTAAACACACACAAAAAACACTTGAATGTCAAACTGAGTTCTGTCGATTGGAC
GGCGAATATGTTCGGGGCCTCTGGGTGATCCTTTCTGCAGTGGTTCTTGAGGGACGTCAT
GCCTATGAACTCACATGGACACACCAGGCAACGAAAAACGGCGCTGTCATCGGTAGGATC
CTGGATGTAGGCGGCGTTGAATCTCACATAAGGGTGAGCGGTCTGGTAATGCGTTGATAC
GCGCGCCACGCTCGCCTCGTTGTAGTTGCAGTGCTTGCAAGAATAAATCGTTGCACTTTC
TGAGTCTCCGTTGACGAGACAGAGCTTCTTTTCTCCCTCGTCTTCGCTTAGGTCAAATGA
AAATTTTGCGTTGCTTGACGACGATTGTCGACGACCAGCCTGCTGAAGGTTGGTCGCTCC
TTTGTCTGACTTTGCTCTTTTAGCAGAAGGAGCCTTTGAGGTTTCACTGTTGGTCCTCTT
GGTAACGTCAGCGAGTGATTCTGTGATTTGTTCCCCGGGCTTCGGTGATCTCATTTTCAA
ATTCATATGTTGATCGTTTAGCAAGAAACCTGAAGAAACACGAGTGATATCAATCATGGA
GTGCGTGACCTTCAACACACCACTACGGTTTGGGTTTAAGTTTGAGGGAGATTCTTTCAA
AACGACGGTTCCTTCGGTTTTGTCTGGAAGATTTGGGCTTTCGACCGAGTCCGCCGGGGG
TTTCTTGTTCGGGCCAGATGTTACCGTAAAGTACTTGGTAATGGTTTGCAATGGCCGCTT
GTACGTTTTGAGAACCTTTGACGAGTCAAGAGCGTTTTTAGATTTTGAGGTCGACACCAC
AGACACAACGGAGCGAATTTCTTTTGCTTCAGCAGACATGTCCTTCGCGCTGGCCTCCAG
GTTTTCAGAAACCGTCGGATTTCCCCCAACGCCTTCTGCTTTTTTAAGACATTGCATCTC
GTGTCGGTTAAGCACGGCCCGACTACACGCTTTGAAATGACAATGCTCGCATCCTAAATC
ATCTTCTGCGCCATTGCTATTGCCGTCGGCTTTGGCTTCGTCGGTCGCAACGCACGTGAG
ACGAGCCTCTGTGGGAGAAGCCTCTACGTCACAGCCGTGCACCTTGTTGAGGTGTTCAAA
AAGGTAGACCCTGGATTTGAAGCGGAGTATACAACGGCTGCACGGAAAACTCTTGTGTGG
AGATTCTTGAGTGCCAACTGGATTCGGTTTACTGTAGCCAGAGGTGAGGGCGTTCAGTGG
ATCTGAGGAGGTAAATAAAAGATCATGTTGAATACTCAACTTAATTCCATGTACTGACAC
AACAACGTCAGAAGAGTGACTGGGACAGATACCTTCCTGCATCGTGCATCATGTGTTCCA
CAGGGAAATGAGAAGACCTAGAAGATTGAAAGCACACATTACTGCACAGATCAGGGTGCG
GGTTACTGGTAAAGTAAAGCGCACCACTGGGGGGGGTGGGGTTAAAAATCCCAACAACAC
CTCGACAACAATTATTGTACTGTTATTAGTATTGAGGGATACATCTTTGGAGAGCAGTAC
AACAAGGCAACTAGAAATTACTTTGGACCTCAGTCAGGTCAACTCGGGAACAATCAACAG
GAAAGAAACGTTAGGAGAGTCGGTCCCCTTTACAGACAAACTGGTACGAACTCTTCTAAC
AAAACAATGAAAAAGAAATAGCGGTCAGTTAAAACTTGGATTAATACTCGGCGCAAATAA
TAATGCATCTACTCACGCACACGGATGAACATCGAATGAGGCTTATAATGCAATATTTTC
AATTGCTGATGTTGAGAAAGTCGAGAGACCGTAAGCATCCGCCATTTTTTTCGCGCGAGT
ACTCTGCTCTGGTTTGTGCCGCTTCCGCTCCACCAGCGAAACGTCGGTGACGTACGTGAC
ATCACTTCCGGCGAAAATCAAAAACATTCCAAATTAAATTGATTATAGGGCGGTGCGCTC
ACCAAATGCCCCTTGTCAAGATTAGGTATTTGGAAATGAAAAAAAGAAAACAAAAATAAT
ATCGGACACCCGCGCGTTAATTATGAATTCAGAAACTTTGCACGCAACGTAAACATCAGC
TGTTCCAGGGCGGCTCGACGACAGCTAGCTGCTAGCAGCTAACTAGCTGCTATGACACAA
GTTGCTTAGCCCGGCTAGCCGACGCACTGTTGAGTTCGACACATGTGGCCCCGTCGTAAC
GGGGAGGTGACCGAGTGAACAGGCGGATATGTGACTGCATTTAGGGAAAGCTGAAGATGG
AAAGGGTAACTGTAGTCAACGAAAAATAACGTAACGGTGGTTTGTTTTCGTTCAGCTAGC
TAGCCAGTGACTAACGTAACGTAAACTTGTAGAAGCGTAACTTTTAGCGAACATTTGCTG
TGCGTGTATACATTAAGACGATGGCTTTGACATTTAAAACGTGTTTTAGCAAACCAATCG
AATGTTGGTTATCTCCCTTTCTAGGTTTTTCAAAGTCTACAAAACATTTTTTTTAAAAGT
ACTGTAAGCTAATGAAAGGTTAGATGCTAATTTGAGTTAAGGGCTAAATGTTTTGGTTGA
ATTAACTGTCAATCGCGAACGGTTCTCGAGTGGAGTGTGAGCCGTATGATGTGAATTAAA
AACATCAGATCGTTATTAAATACGTGGGGCGACACGCGGCTTCACTAGCAGCCAAAGGTC
GTGTTCCAGCAGGCTGATTATAACATACGATCTCTACTTGCCCAGGGGGGGAAACCGTCC
CCTGCTGCCCAGTCCCGTGAGCCCAAACAACTGAGGAAACCGGGAAATGATTCTGCTGAG
TCACACACGGACGCACCAGCAGCTCCCATTTCACCAAATCCATATCCGTCCGATCAGAGT
TTAAGAGGGTAGGAGGACGATCGGTTATTTTGACTCGATTGAGTAACCATCACTTGACCC
AATGGGTCGATGTCAAGCGCCTTATCTGTGTCAATGTGTCTGTGAAGGAACGCAAGGAGT
TCGGGTCCGAGCCGAAGGCAGCGCGCATCAGATGCAAGTGGAGTGCCTGCAGGAAAGTGG
GTGGATGTGTCAAGGGGTCACGGCTACAGCGGCGGCCGGCCTGTTCGAGACACCGGGGAT
GATTTCCTGCAGAGAGGCAGGTCCTCGCGGGGTCCTCAAGCTAAGGTGGGTTTGGAGTTT
TAACCCGTCGGCAGGATCGGACGGAACAAAATGTCTACATGAAATTGGTTTTGGTGATTT
TGTCTCCATCAACACAGACGTCAAAAGGCAATAGTGGTGTTCATGCTGAAGGCAGAGTTG
TGGGCAAGAACTCACTGGATCCACAGCAAAAAGGTAGATATCACAGCTTTTTATTCATTT
CAATGATGTATGTGGTGGAAGAAATACTTCCCGCTATTGAGTCTTAATGAACAGTATAGT
AGAATTACTCTTCATTGTAATACAGCAGTCTTTGCCTTCCATTCTACAGTCTTAATATCT
AACAGGAAATTCATTTGGCATCTTTAACTTTTACCTGAACGATCCCAGGCGTGAATCCGA
CCACTGATTTTAATCAGTAAAAATGATTTTGGCGCATTCTTTTTGGTAAAACGTATTAAT
TGCTCCTCAGGGCTTCGAGGGGGAAGATCTCTCCCGAACTCTGCAGAGCCGGACTTGGTC
CCATTCGAAGTGAAGATGACAGACTTTCCCGAGTTAGCTGTCGGTTCACTGGGAAAAGGG
GATCCGCCTATTCAGAAAGAGAGCCGGGGTCCAACCATTCCGTCCTCGAGCCCCCAAATG
CGGATAGCGGCATCTTCCTGGAAGGTAAGCTCATTGAAATATCAGAGGCGATATCGTGAC
CTGCTACTAGTTATGCTATAGAATTTGGTGCTGATTTCATTTTTTGTTGAAAAGTCTGTG
AGGAAAGGACCCCCAACGCAAACTGACCCCCGACAAACTGGCAATAATGATGTGCCAGAT
TCTCCCGCCGAGTCACCAGGTTGGTGAAAGTGCCCGCAGTCAGTCTTTTGGTGACTATAA
AGCAGTGCAAAATCACAGTATTTTTCTTTTTGTGAACAGGTCATCTGGGCGGAACGTCCT
GGGCCAATGTTGCCTCTCAGCCTCCAAAGAAACCTGTCCCGAAAGAGAAGACAATCAATG
AGCAGGTTAGGAGGCATTTTGTTTCTATTCAGGCTCTTGGGCGTAACAGCGCAATCTTTA
CATGGTATTGCCCGTCTCAAAGTGTTTAATTAATACATGATATTAAAAATGAATTACACT
AAAAGATGTGTTCTTGCCTTGAAACCCTTAAAAGTTTTCGGCCTGTAGATTTTGTTTTTA
AACATAGTTCTCCTTCACTTGTTGTTGTCTCCTCAGACAGAGGAAACGGCTGCACAGCGG
GAGGAGGGAGCTCCGGGGAAGAGAAAACGCAAGAAAAAGAAGAAGGCTAAAGGTGCTGTT
GAAGATGCAGAAGAGGAGTCAGAGGAGCCAGCAATGTATCAGGAGCTTCCAAAATTTGAG
GTTAATAAGAAGATCAGCATCCATATTTTAAATTCAAAAGTTGTGATGGAAGATGATTTT
AGTTGCAATGTTGCCTTCTCAGGATGAAGAGGAGTTTCCAGGTTTGTCTCCTGCTGTGAC
CAGAACTGAAAGATTGAAAACCAGCAGCTATGCAGCAAAACTATGCAATGAGGTACACAT
CAACAGTTATTTCTCCTCCCAGTTGTTTTTACATTAGAATTACTATACTGTGTCCTTTTA
CTAAAATGCACATAAAATGGGGGGATACATTACAGTTACATTGCGTCCTCCCCACCCCAG
GAAAACCAAAGAGAAGGTGTTCAGCGTCAGTCTGCAGACCACAAGGAAAAAGCACCTGCA
GAGACGCATAAGAAAGGACAGGTTTGTGTTTGTCTTACATTCAAATTGGGCTTTGTCTTT
TGCTATTATCCGACAAAAAAAAATACAATGGAGATTTTATTTTTGGGTTTCCTCATTTCT
AGAAAGTTGAAAAGGTTTCT
Chart Advanced