SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00001144_2.0
Identity
PromoterSECIS binding protein 2 (SBP2)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001144
Promoter release2.0
External IDNone
Transcript SPT00001079_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001144_2.0 # Promoter # SECIS binding protein 2 (SBP2) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
GCACCAAAGACAAATGGACGGCCATCAGCGCCGGACTGCGAGCCGGGGAATGACTGCGGT
GCCCAATCGGAGTGGGACGGCGGTCTACGCCGCAGAGCGTTGATCAATCTCTCAAATAAA
GATGGAGAGAATGTGGTCACTGACTGACTGCTTGTATTGTATCAAGCCCTCTGTGTTTGC
ATTGTCCGCATCTGCTCGATGCAACGAATCCTATTTCAATAAGGTTACGTCCGTCACACA
CACACACAACGGGAGAGTTCAACAGTGAAAGCGAGAATTCACATCGGTTTAGTAAGAAAT
CCTCCATTATTTCAGACATCAAGTTGATTGTTTGGATACGTTTACTAAGCTCTTAAAATG
TATAAGACTAATAATACAGATTACAAACATCAACTTTCACATTGTAAAAACTTTAATGAG
AGAAGATCTGTGTACAGGCATTTTCATCGTATTGCCTTGAGTAGGGAATGTCTTGATGAA
CAAAGAGGCTATTGATCAACCTCTCCTTTGGTTAGTTTTAATCACAGCTGGTCACCAATT
TCGTCATACTGCTGGAGTTAGTTCAGTCCTCCATGTCTTCCACAATCAATAAACACGGTA
CCATAAAACCTTTACGAGTTCAAAGGCTACCAAACATCGAACTGAGAGGATCTAAGCAAA
GTACACAGGATGTAAAAAGAGGCCTCCGGCTTTGTTTATTAGTTAATTTATCACACATCT
GCAGCACAAACAAAATGGGTGAAGAATATTAACACCAAGCTACTGGTGATGAGCAGAGTC
TCTGTACCCAAAAGCCCAAAACAGGTATTAGTGTCTTTGGGAAACATTTCATCTCACAAT
AGCTAAAAAGCTATATGGCTCCCAGGTACAAACACCAGACTTAACAAAGTTACAAGACAC
AAACTGTAGATGATTTTTAACAAATTAAGGGCCTAAAGTAACTCATACATTTGGAGTTCT
CAAAGACTTTGAAAGATTTCGCTAGTTATGATATAAATCAATCCAGAGCAATTCACACTA
TGTGCACATTCACTAGTCGTCTTGTCTGATTTCACGAGTCTCCAGATTTACGACCTAGAC
ACACAGCAAACAGTCAGATTGTTCTGCTGTAGGAACTGGGACGGCGGGCCACAGAAAAGC
CAAAGATTTGCCATTGGGTCATTAGAAAGCCGAGCTGGGACTGAAAAGTACTTCCAAGCT
CAAACTCGAGATGCAGCCTCAACTGGACACATGTTCAGTGATGACTCCAGCTGACCGGCA
GGCGTGCAAACATCCTTAATAAACCACGAGGAAACAATCACATTAGAAAACATGCCATTG
TTTGATGTGCAGTCCTATTTATATACAAAATGTAAAACAGCAAAGGCGCCATTGAAAAAT
GATGACGGATGAGCTCTGTACAAGCGGTCCTAAAATAATCAGACCTGTTGCTATTTGCAA
CGGGTGAGGAGAGGTGACGGGGTTTAGGGTACAAAGCCCGCCCCCCCCTCGCTTCTCTGA
AACAGTGGTCGGGGTGCATGAATAGTCATCAGTGTGGCCAGTGGATGTCACACAGACAGC
CATTGTCTCCCACTGCTACTGTCGGCGGGTGGCTTCTTTCTTCCTCTTCTTCCCTCCCCG
TTAAACAGTTTATTTTGGGAGAGTTTTTCCTCTTCAGCAAATTTGGGATTTGGGGCAATA
CCATAATTCAAATCTAGCGCTCATCCATTCTGTTGTAAATTAAACTTGGTCTACCGGTTC
ACGAAAGAAGAAGAAACTGTACTTGTAATGCAATATTTTAGTATCAGCCTCAGTGCAGAG
ACCGACAAAGCGACACGGGTTTAAGGACCCGAGTAGGAGACCGGAATCAGCAACATGGCA
CATTACGACCGACGGGGTGTTGTTATAGGATTAAGTTTTACAGGATCAACTGCTCCAGGA
TAAGCTAATTATACAGCAAGCCAAAGTATGGAGGCCTCACTTGCAGCCATGGTTAATTCT
TGAATTCCTAACAGCAGTGGTAAAAATCCAACAATCAAAAGGAAAGAAGAAAAGTTGTGA
AAGAAGACAGAGCTGGTCAGAGGACACATCTCTGGAATCCATTACGTGTGTGTCTTTGTA
GCATCCGAGTGTTGGAGGGCGGGTGAGCGAGAATAGCTGTGATTGTGGAAAAGGCAGTGC
GGTCATACCCAGATGTGCATCGGCTGGGGGTGACAGATGTCGGAGTGGCCAGGCAGAGTT
GGCTACTGATCTCACAAACCCTCTTTTTGTGCGATCGACTTATTCTTACACAAGTTGCAT
TCACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
ACGAGAACCGGCTTCTGCGTTGAAAGAAGAGCAAACTCGTCGGATCTCCGAGGCGGTTCA
GCACCAACGGAGACACAACTGACGGATGTCACAATACTCGATCGCACTTTTTTTTTCCCA
GGTGTGACAAAAATCTCGCACATTTAACCTGATGAAACCGTGACGTCACCACCGCTCAAC
GCTAACCGGTCTGAAAGCCTTTTCACAAACACAAAACCCCGGCACGCGTAACTTTCTGCA
TTACTGACGGCGTCAAAGGAATTTCACACATGCAGAAGAACCGGATAGTCTCCTCTCCTG
ACGATCCACGAAACCTGCCCCCCCCCCCTCCCGACAACAACAAAACTAATGCACATTGCT
GGTTAGCCGACTGAAACCGTCTCGGCAAATCTAACGCCACGTTTCTCCATTTCTGAGGAA
AAACAGCTATCGTTTTTCACTCCAAATTAGTGCTGTCAGAAAGCTCCTCTGCTTCAAGCG
ACAAGCGCCGTCCAATGACAGGAGAGCTATTCAGCTTGAGGCTAAGCAGCTAGCCAAGCT
AACTCCTGACACGGGACCGTGTTTCTCAGCTTGACGTTTGAGCATGAAATGAATGCCACC
GAAATCGAGCTTACGGTTTCTTTACGCAACACGAAAACAACGCGAATGCCACTGTGACAG
GAGACAATTAATGGATGTGCGCTATATGCGTTCTGCTTTTTCCGCCCCGAGGAGCTCCAG
TTACCGTTAGCCGTTTTAATGTTAGCTTGCTAGCTAAACGGGATAACAGTTTGCACGGTT
GCTCCCTATGACAAAACACGTAACGCCCGATAGCGGGCGGTTTGTTCCTATAAATCACCC
AGATAGCTTCTTTAAACCACAACGATGCATCGCTGCGTTTAATAATAACGTTTATTTTAA
ATAACGTTTACCAGAGAGCGATGTCGGGCCTCGGCAGTGTTAACTGTCCGTGTTCCCTCT
TCCACGAGTTTCACCCTGCACCCCCTCCCAAAAAAACACACCATAATTTTAAAATTAAAC
TGACACGTTACCTTATAGTCACTAGAGTCCATGTCAGTCACAGACACCGCGACGGAGGGT
CATTGACCAAAGCGCGGACGTCAGGATGTGGGCCCTTTTATTTTCTTCATTGTGAATGGA
AAATAAAAAACAACAACCACCACTGAAGGACTTGAGACTTACAGCCAGTTCCTACACAGC
GCTCGCTGCTCCGCTCAGCCTGCGCCGACTGTTGCTGCGTCAGCTGGCGGCGCTCCGCGG
ACTTGCGCTGTGTGAGAGTGGAAATGGGAGTCACCTGGGACGGAAGCCGGGGCGGCTCAA
AGAGGGGGACAAAAAACGCGTTAACGCGCGTCACGCGGCGAATGGAAACCCATCTCCAAA
GGAGCGACTGGAATGAAGTACAAGAATGAGGGATTCGCGTCTCATTTGTTACAATTAAAA
ACACCTTTATTCGATGCCTCCTCACCAGTCAAGAGTTTATACTGTAGCTGGTCAAATTCA
ACAGAATCCTTTCAGTGGTGAGAGACATCTGTTTATTACCAACAGGCAACAGTATACATT
AAAATATTGTGTACAAGTGTTCATACACATTTTGGACTTTTTTTTCTTTTCTTTTTAAAC
AACTGTAGCATTTGAGTGTTGCACGTGGAAGAATCTGCCAACCAGGAACATAAAAAACAG
AAAAATAAGTGCCAGTGATTTCCTCTCGTCACAACAAAACAACACTTTGAACACGCTCTC
GGGGTTCCTGGAGTCTTCTTTAAGTTGATGGCATTCTCAAAACCTGTGCTGTGCATCTTG
TCTCGGACGATTTACTTGAAGAAGCACAGCAGCATACTTTGTGGATGTACTCATACGTGC
CATTTTCCTTGTCTCTTGATTTTACATGCCATCATGTGAGCTTGCTAACAATGGCTTGGT
TGAGAGAGTTCAGCTGATTTGTCCATTTGTCTAATGCTGTGTAGCGAGCCCCTCCTCTCT
TCTGGTAGTCCAATTCTAGTAGCTGGTTCACTTGGTCAATTCGGCCATGGATTGTGCTGA
AAAAGATGGATAAATAAAATTAAGAATTCAAGCCACGTATATAATAACTGAAACTTGAAC
AGTTTCTAATAGTTGCGTGGTACTGCAAACTTTACCGAGACATGTCTACGGTTTCCTAAA
CTTTTTTTTTTTTACATTAATAAAAATGACCAAAAAAGAATTTCTAACACAATAGAGAAT
GATGGCAGCAATATAAAAGTTTTTAGTATAGATGTTTCCCTCTGAACATCAGAATAATCT
GATGTTCTCCCCTGCCACTTGACGGTAAATTATTCCAGAGAATGAGAATTATGACAATCA
TCTAGCACAAGCTTTAATAACCGTCAACTCATACCGCCTGACTCTTACAAAAGAATTCAA
TGAATGAGGAACAACTTATTTACGGGAAGCAAACTTTTTATCTTTTTGACTTCTCAGCAA
GAGCATGCGGGAGAAACTTACTTGTCCAAGATGCACTGCACCAGCAAACTCTCCACATCA
CACACGTCAATGTTCAGCTCCTGTAACGGAAGAGCAGAAAGAAGAGTCATCCTCACATCT
GTAAAGACCTACATCAACTAGTACGACTTCACATTGGAGGAACAGAAGCCACCGATCTGG
TTTTAAATTATTATTGATGT
Chart Advanced