SelenoDB
Release 2.0
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Promoter Report for SPR00001148_2.0
Identity
Promoter15 kDa selenoprotein (Sel15)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001148
Promoter release2.0
External IDNone
Transcript SPT00001083_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001148_2.0 # Promoter # 15 kDa selenoprotein (Sel15) # Stickleback (Gasterosteus aculeatus) Full length # Forward
CGCGGGGCTTCAAGCGCCCCGCGGGGCCCAGAGGAGAAGAGGCTGTTTGCTACAGTTACA
AAAAGGCTGCGAGGTTTCGCTTCAAACAAACCAGCAATTAACAGAACCTGTAGCGACAGC
TTGCAGGTTATCAAATTACTTTATAGTATCACAAAGAAGGGCGGAAAAGCAGGCATTCCT
TCAATAGAACATTTGGGGTTTTGTTCTCGTTTAGGAATAATCTCCCTGAGGAAATAAGGT
CAGCGTGGCTCGTTGTATCAATAAAAACAGGCGGCAGGGACTGATGTTTCAGAAATAATA
GTAATGAATGAATAATGATGAACACGTTTTCAGCCAGATAACACAGCAATCATAAAAACA
GGTTTCAAACCCACCACTCAAAGTGTGCCTTGGTGCCAAAATATTACCCACAATGCATCA
CTTTTGTGGTATCATTCAGGTCAGATATACTCAGCCTTCTGTATTGTGAAGGGATGTGAC
CTCAAGTCTAGTAGCATCGTGTCCGCTTTGCACTTCATTCATTTAGCACTCAGTGCTAAA
TGAATCTGCACACTCGGAAGATTGAAAGAATAAAAAAAAGTCCACATGATCAACTTATTG
GAACTTATTTACAGTTATTTTAGGAACATGAAAATTCCTCCGGCTCGGGCCTACTGGGTG
CTGCTTCAAAGAGACAATATTCCTCAAATGGTTAATAAGATCTAATCCCGGTTGGAATCA
AATTTCAGCATCATTCTTCGGTCTTAGACTTAACGTTCCATAATGGCAGCAATTTTTCAA
GGTGAGCTTCCCAAATTGCGTAAACAGAGAGGGAGTCAATGGCAAACCTGACAGGGAAAG
TGGCTCTGAATCCGTTGCTCTTAATATAAAGAAACTCTATTATTCCATCCATCCCTGCAG
TCATGCTGCGTTACTGTTGACCCGGCCGGCAGCAGCCGGAGAGAAATGGCGTCAGAATAA
TGGATTCGGCCCACGGCGGGACACACCGCTGCATCGCGGCGTGCTTGAAATGCAGGAGAC
TTCTCTGGGAAACGGGGGAGGCGACGATTACTTTGGAAGCAAATCCCAGCTTGTCCGCCC
TGCAGGCCGGGGGCGGGAGGGAGGTAGGGGGGGGGCTAATAGGGGGAAATGATTCAACCC
GCATGTGAGGCGATGGGATCCGCCGCCGGTCAATTCCGATCAGGGTGGAGTTTTAACCAC
CAACACGGGCGAATCGTGGAGGTGACGCTTGGAGCTTCTCCGGCTTTGAAGCACGCGAGA
ATCGTTCATGGAGGTTCGATTTGGCACCGCTGGACTGGCAGCGGGGCGCACCTGGTACGG
CTGTCGGGACGGCAACGTGAATGTTAGAGCCTCAGTCACAACTATTTGGCCACGCAGCAC
GTAATTCAGAGCTGCAGCACTCAGGCATCTGCTCGACCCAGTCATCCATCAGAAGGCTTT
TTGCCAAGTCAGCAGATTCTCGTGGTGGCGGGCAGTCGGAGGGGAAAAGGCCTCTCAGGT
TGTGTTTCAGCATCAGGGGTGTGTGTGTGTCTCTGTGCTTTCACTCTGTGTAAAGTATAG
CACTTTACGGCAGCAATAATCCATGCCACAGGCCAATAGAGCCATCTAACCCCCACCAGG
ACACCAGAGTGCTCCAACATGTGAAAAACTCAACTGGGAGGCTTTATTCAATCATGAAGA
CGCAAGACTTCTTTATTCACCATCTCGCCTGGATACCGGTTCGACTACTCGCCGACTTAA
AAGGCTCAGGAAAAACTAACATGGAATAAATCATTGACTTAAACCCAGAATCTTTTTGTT
TTATACAGTCATATACATTTAAAAGATTCACTTTTTTATGATCATATGATCATAAAAAAT
AACTATAAGGAGATATTTTAAGACGTCAGGAACGGCTTCAGGACAACTTTGACTCCACAT
ACGTATTAACGTTTGTGCACAGCAAAGATTCCAAAAACAACTTGATGATTTGACAGGTGC
CTGTTGTAATGATCACACAACGCCTGTACATCACGGCCGTTTTCCACCCTCTATGGTCTA
TAGTCAACAAATCATGGCAATTTTTTATGTCATTGATTACACCTGCACTTTTCCTGCTGC
TATTGAGGTGACAAAATGTCTGCAGAGAAGCTGGTCAGTTGGCGGCGCCCTCCCCCCGTC
GGTGCCGGGCTCCCACTCACACCAAATGTTACAAGAGGTGGTGTCTGAACCCCCCCTGGG
GTACACCGGCCTCCCCCTCAGACCGTCTGCTGCTCTCTGCAAAACAAAATCCCTCCAGGG
ATAATCCTGCAATGTCCCAGATCTTCATTGGGAGTGAGCCCCTGAACTTGGGAAGTCACA
ATGAGATTTGAACACGGCGTCGGCTACGTTTCAATCACGGGAGAGAGTTTAGTAAAGCGG
GAGGATTTGCAGCAGGGTGGCGTCCTCATGAATAAAGAATATCACTAAGAACACACTTGG
AGGCAAATAGAGGTTTCCTGCAATACACTGTGCATCACACCTTTCCAGAAACACCGGCTA
CAATAAAGCGTCTTTTTGAGCCGCTTGTTGAACCAGAACATCTCCGTGGGCTTTAGAAAA
CTGAGCCGGGCCATTTTTCCGAAACAAGCCTGTCACCGGGCAACAGGCTGAAGAAAGCAT
CTCCTCCTCCATCTCCTCCATCTCGCGTTGCATTGCACAAACGGGAGAGTCTGTAGGGCA
TTAAAATACAAATACCCCGGAATGACCATGCAAAGTTCAGTCTGGACGGCTCCCAGATCA
TTAAACATGACTGTGTGCCATTGTCTGGTTAGTGGAGGGTCTCTGCACACCGACCCAGAT
GCACAGCCACGGTGATGCACGTATCTACACGGCGAGGTCAGCATCGGCCCGCAGACCCCT
TTAAACTTACCGAGCTTCCCCCTGGACTCCTCCAGCTTCTGGATCTGGTTCTCCAGGAAG
AACATGGCCACGGCGAACGCCAGCAGCGCCAAAAGCTGCAACTTGGGCGGCATCATGACT
CTGAGCAGCCCCATCAAATCATCCAGAGGGTTATTTGTGGTCAGTCCATGCTCAGAGACA
GGAGACGCTGAGAAAACACACACACACACACACACACACACACACACAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGCGACGACGCTGGTTACAAAGCGGCTGAGTGTGCGA
GCATGGCCCTCGGTGTGCGTGTGTTTTTATCTAACAGTCTTAAAATCGTCCGGTTACCTC
AAAGGCGATGTGTTCACGCGGGGCTTGGTTATTTCATCAAGTCAGTGCCCGACAGAGGGG
CGCCGCGAGCGGATGAGAGGAGAGAATCGGTCCCCGCGGTTGGTCGGAGCGGTGGTACCA
AGCCGCTGTCGCCTGCGTCCCCCATGTAGCGCTGCTCTGTCCCATCCAGTTTGTGTCCAC
CACCGCACCACGGACACACTATTACTACCGCCGAGCCCATTGGACGCGTCAGCAGTCCAG
CGCGCGGCGGAGGATTTCTATTGGTTGACTAAATCTGTCTGTTCACACCGGATTGGACCG
TTTTCAGAAGCAATGACCCCGACCTCCGCCAGCAGGTGTCGTAGTTTTTTTCTTTTCACC
CCGATAAAAACAGAGAAGAAAAAGACAGTGATAGTCGACCGTAGAACAGGCCTCACCTAA
AAAAACGCACACAATTAAATTAGATTAATTTGAATTACTCAAATACCCATCGACATATTG
GTGTAACTGATAGGAATAGCATTTTGTTAGCAACAGTTGAACATGTGGGAAACATAAATA
ATTAGTTATTATGTTCTATGATCAGGCGCAACGTGGCCGCCCTCCGATTAATAAATGGGT
CCTCCGAGTAGTTTATGCTAACAAAGCAGCATCCAAAATGTCGGGGGAGGTGTATCTTCT
ATGGCTTCTCTCGCTTTTACAAACGGTGAGTTAATTTACACAGACAGGTGGTTTCCGTGC
GATGTTTTGTACGTTGGCACAGCTGTTGTTAGTCGACTATTGTTATGTGTAGTTTTTTTT
GCCTCATCCTGCTGAGCCCGGATCTTCAAAATGACGTGGCTTATCCCGAAAACCCCAAAG
CCCAGGTTTTCATGTGGAGCCTCCTCAGAACTTATTCGACAACTAAAATTATATAGTGAT
AAACCGCTTGGTTTGTCAAAACCGGTGTTAAAAAAAAAAAAGAAGAGACAAAGCTACACC
AGGACTTCCGGGTTTGTAACGTTACATTAGTTGTCCTCATCAAGAAGCCGCTCTCTGCTG
AGTAAATCAGTCCTCTCCTCTAAAGTCATGGGTGGACAATGTGGACAATGGGGCGATATA
ACATGAGAGGACACTGGTTTTCTGATTACTCGAAGCAAATCCTGATTTTATTAAACATGC
CGGTTAGTCGTAGCTATCCTAACTGACGAAACAAAAGTAGCCATCATCATCGTCATCATC
ATCATTATTTGAGTCATTTTGTTATTATGTCACCAGTACAACAGTGTCACTAAAGTGTTC
TTTAGCATCAAAGAGGATAAATCTAATGCTCACATTGCCAAAAGTTTACTGAGTCTAATA
TCTGTAATTGAGAAATGAAATTACAATTAAGTCCTCTTCGCATAAAAATGCCATGTCTGT
TGATTGTTTTATTTCTATATCAAAAATCAAATTAATAGATTATATTTTAGTTGTAGCACC
ACCATCCTATAGGCTAATACGGCTTATATATATATATATATATATATATATTATTTATAT
ATATATTATTTATATATAATATATATATATATATATATATATAATATATATATATATATA
TTATATATATATAATATATATATATATATATATATATAATATATATATATATAATATATA
TATATATATATATATATATTTTATTTTTTTCAACAATACACTGTCAGAAATCTGTACTTG
AAGTAATATTGTTATACTTATTTACATGGCCTTTCATGTATCCTGTGTGTGTTCTCTCGT
CTCTTCCTTCCTCCCCCCAG
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