SelenoDB
Release 2.0
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Promoter Report for SPR00001155_2.0
Identity
PromoterSelenoprotein M (SelM)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001155
Promoter release2.0
External IDNone
Transcript SPT00001090_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001155_2.0 # Promoter # Selenoprotein M (SelM) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
GAGAGGAGGGAGAGAGAGAGAGGCGTGCAGGGCGCTCATTGGTTATCGGCGAGATCCCTT
TTTAGATACAATCCAATACATTGCAAATGCATTCTTTGCATTAATCATTGGAAATGTAAG
ACATCCCAAGAAAACATACACAAGCTCATATAATGTCGAACTATTTTCCGTTATTTATTT
GAAGGCGGAAGACGGCACGTGGGCTCTTTTGTATCCAGAAACCATGATTATAGCTGCGGA
AGTAAATACATTACAAGAAATATTCATTATGGGGAGTTCGTCACTCGTCTTTATGACACT
GACACACTGGAGAGAAACTCCTTACAAAGTGAGTGTTCTTACACGTTGGAAGAGTTACAG
ATGATTGATTTCATCAGTAGAAGGCTAAATGTTATGCCTAAAACATGGAGCCTGAGCTGA
ATGGACATAAGTTGATAATATTTGCGTGTCTCTGTGTCTTTCTCACATTGTTGACCATTT
CTCATACATGATACATGATCATATCCAATTCATATACGGTTAGTTTGAACAGGAAACACC
TCACTGCAGGGTATTGCATCCACGCTATGGTTATTGTAAAAGTGTTGGTTCAGTTTGTTG
TCAGCTCCTTTGCAGAACGCAGCTACATCACGTGTAAGACATATATTTTTACTATCATTA
CATTACATGACATGTCATTTAGCTGACGCTTTTATCCAAAGCGACTTACATTGCATTTGT
AACCCCTGGTTACAGGAGTGGAGGAGGAGTAGTGTGCAGGCGTAAGGGCTGCCCGGGGAG
CGGTTAGTCAGACATCAACATCTGAGGATAAAAGCCTTGAACAACTGGGAAACAAGATAC
TGTCGTGTGTGCATGTGACCTCTTTGAACAAAGGTCATGGATTAGGTGCACGCGCAAAAG
TATCAGATGTATACTTGCCATACTGGTACTTGGGCTCAGGTATCAGCCAATACCAACACC
CTTGTTTATAAGCTGTTTGCTTGGTAACATTATGTCAAGTGTAAGGAAACATGAGGCTGA
CTTAAAGATTGCTTTCTGACATTTGCAAAACAAAATTCTAACAATAAAAAATGTCCTGCA
TCTACTATTTATGAAAATTGTCACTGATACCTATTTGACTCATAATCGGACTTACATGCA
ACATCAGTATCAGTATTGGTGCATCTCAAGGGTTATTATGTTACATATGTCCCATATTAA
AAGTATTGAAATACATAGTATGACATTGATAATGAAAGAACAAAAACAATGTCGATTTCA
TCAGCTGAATCAACTGAAGTGAGCCCTCATAAAGTAACCCCTGACAAGTATCTTAACAGT
ACAAATTCCTGCCAAGACGACCTGTTTGTGTACCTTTTGATAGTTACTTTTACCACTTAA
ACCATAAAACGGACACGGACGGGGGGGGGGGGGCTGTCCACCAACACAAGTTCTCTCAGC
AGTTTAAAGATGACGCTCAGAAGCAGGTGTTTCTAGTGAGTTAGAAGCCACTGCTCGTTA
TTAAGCCAAACACTTCTCCCTTCCAACCGCTAGGCGTCAGTAGAGCGTCATCATAGACTT
TGACTACATAGAACGGCTTTTTGTTTTTTGAATTACCACTGTACAGTTAAAAGGCCATTT
GGCATGCGCACGTCCATAGGCGGACGGCCCGTCGGTGTTTTCGGTGTTACGTAAGCCGAT
GTCGAGCGGAAGTCATGTTTGTGTAATTGCCATGACGTTTCCTGTCTGCGTGCTTTAGCT
CTGTGCGCTTCACGCGCAGTGTAATCATCACCCACCGCCTCGCTCTCTCTCTCTCTCGCT
CTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTCTCTCT
CTCTCGCTCTCTCTCTGTCGGTGCCGGATGATTTGGTTTTAATTTGAAGGGCACCGGGAA
GGCGCAGCCCGGGTCTTTAAAGCCAGGAGGGACGTGGCGTGTTTATGAGATGTAGCTTCA
CCGGCATCGCTTTCCAAACCCACCTGTCACCTCCCTGCTTAGGACGGAAAGAAGGACGGA
AGGAAGGAAGGAAGGACGGAAGGAAGGCGGGAAGGCAGGAAGGAAGGAAGGCAGGCGGCT
GGCATGCCGATGGTTTCATCTTCGAGGGCGACTGGAAGGGAAAGTTCAGCCTGTTTTCGG
TCAACGATTCACTCCTTCTCGTGATTCCCGTAATTTCACAACCTCCGCCGAGGCACCGCT
TCATCTGTAGACACATTTTACCCGAAATCCATCAGCTGTTTCAAACCATCAACGCGCAGG
AACACAAACAGGTAAAAGGTGATGACAAATCAGCTGTTTGTTGTGTTATTGTGCTGTTAC
TCACGAGTGGACAGAAGAAACACACACAGGGGACATTTGTTGTTCTCCATGGTATCATCT
TGACATCACCTGTAAATAGACCTCTAGTTGTGTCTGCGTGAGAAGTGATAGTGGCGCTGT
GTCTATTCATACACGGTACGGCATTTGTTTGCAAAGCAACACCGTGATGATTAACAATGA
ACCAATCATCATTCTCACATTCCCCACGCGAGAGAATCATAATCAGGCAGACGTTTGTGG
TTTTCTTCCCTCATCCAATGCAAATATACACACAAATGCATGCACACACACGCACCTGTG
TGTCTGAGTTAATATTTGATGGCAAAACACTGAAATACAATGACCTTCATCCCTTTTGTC
AGCCAGATGAATATTGTCCTTGAAGCAGGAGTGTAATGAGGCCAGATACTGTATTTGTGT
GCTGCTGTTCAGTGGAGCCAGCAGTCATTTCTGTGTCATATATATAAACATGAATATCTA
CCATTGGCCAAATGCCACGAGTGTGGACTTCAGTTCCAGTGTTTACATAACAGAGTATAG
AAATCAAACACAACTTGGTAGTCAAAAACTCTACTTGTCGACTGTAATTGTAATCTAAGT
GTTTTATGATCCACTGGATCACTTACAGTGTAGTATTCAGATGGCCGTTACATGCAACCG
TGTACTGTAATGCGATTGATGCACTGCTAGAGGATTAAGCTGCAAACATAGCCATCTGTA
GCCAAATTGAATTTCAAAAGGCTCTATTAGATTTGACTTCAAATTCACTGATAATAACTC
ACCTAACAGGTTCGCTCAGCGGAACGGAAAAGAAAGAAGCTGCAGTTCTGTATTCTTCTT
TTAAATCCACTAACTGAACAGGAAGGAACATGCAGGCAATGACTTTTACTGCACATGCAG
ATGTTATTGCACATAGCCGTGGCCTTTTTCACGTGCCAAGCACAGTGGATTTATTTTTAT
CTTTCCTAATGATTTTTTTTTGTCACACTTGATTGCATAGCCAAATTCCTTCACAGACAG
ATTATGTTGGACTCAATGAAAATCTTTACCCCATTTACTCCACATTGTGCAATGCATGCA
CACACAGCAATTACTTGGTGAACCGGGTGCAGCTTGACGTGGTGATTATTTTCCTTTTAA
AGAGGGCCTTTTAGGCTAAATGAAGCCAACGTGAATGTTTCCATTTGGCTGGCTTCCATA
ATTGTTAATTGGCACAATCTGAAATGTCTATTTACGACACAAATGTTTGCTGTGCGGACA
TTCAGCTCTATGTTGTCAGCACATGTCTGCAGTGTTCAAATGTAAACAGAATACTTTTGA
CAACCTGCAGCCTAGGCTGTGACCTAATCACAAAGATGAGGCCCCCTGGATGCAGGAGAG
GGAATATAAGTGGCACTAGGACCCAGGGGAGCCTTTTACAGCTGTGGCAGCAGCTGCAGG
AGTCATTTCGGCCCAGGTCACCATTAGTGTCCCTGTCACAGGGGCATATGGCCCCCGGAG
GCCCCGAACACCAACACCCTGCTTGCCTGTAACAACAACATTGAACGTGCAAAGTGTAGT
CAACATTTTGGTTGGAATGACGCTAGTGCAGCCGTGCAGAGCAGGGGGAGTGAAATCTAA
GGGAGGGTATAGATTACTCTCTTTAAATAGAAACAACGGAAATATGGCTTCCCATCACTC
AACAGACTCGGTCATCCAAAACTATCTGTGTTGTTAAATAATCCCTTTAAGAAGCCTGGA
AGGAGGCTGCTGTCTGTTGCATTGCATCCCTCCTGGTTCTCTGAGCTTACTCCCCCTCGG
GAGGGTGCGTGTAAACACCGTGCCACATTGGTTATCAAATCATTCCACCCTCTCGTTGTG
AACGTGAGCGGAATAAGAAGTGATATCTGACGACATAGTTCCCGGAGAAAAAAAAATACT
GGAAAGAAAGTTGCAAAATGTTTGATAGGAGAACTGCATCGTAGTTTTTAGCACGCAGTA
TGTCTGAATTTCCTTTTTCTAAATAAACAATTTAGTATGAATGACCCTAAAAACACATAC
TGGACCATCTTCCTCATACATGGTTTGAACATGTTCTGAGCCAACGGTTATCTCCCTATG
TTCCCCCGAGCCACTGAATGTGATAACGTCCAGTTGTTGCGGCGTACTGCAGCGCCTCGA
CGTTACAGCGACTGGGAGGTGTTTGGCTGAAGGAAACAATGCAGAGAATGTCGCTGGAGG
AGCCCAAGTGTCCCCTCAGAGCACAGTGGGTGCAGAAGAGGAAAGGAATGAAAATACTTT
AGGCCAGGAATAGCGTTGGCGCTCGTCTTGGTGTGAAAGGAAAAATATAGGATGTGAAAA
ATCAAATCGGTGGGATGAGCGAATCAATGGCTGTGCAAGGAAGGTGGGTGAGATGGAACA
ATAGCATCTTGGAGGGGATGGGGAGAGAAAAAGGATTAGAGAAACGGGACGATAAGAGAG
AGAGGAGAGGAGAGGAGGGGGGGGATTAAGGCTGGAAAATTAGATAGTGCCAGAGGGAAG
TGTGAGAGGATCAATGTGGAGACACTCGGTGAAGAGACACAGTGCTGTCACTGAATGGGC
TGTCTCGCTCACCTCTCCCTCTCGATTCCCTCAACTCGTTTTGCACCCACCCACTCCCAC
GTGTGCCCCCTCCCCACTAA
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