SelenoDB
Release 2.0
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Promoter Report for SPR00001161_2.0
Identity
PromoterSelenoprotein R (SelR)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001161
Promoter release2.0
External IDNone
Transcript SPT00001096_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001161_2.0 # Promoter # Selenoprotein R  (SelR) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
CTGCAAGGGAAGAGTGGCGTTAAGAAGCCATCGCATCGCTTTATTGCCCTCTGCAGAAAC
GCCAATGGAATGGCTGTAAAGTTATGCAAGTTAGGGATCGTCCGCCTAAGGAAACCCGTA
CTGCAAACCTCACACATTTAATCCTTATTTTTCTGTAATTTGGCTTTTTCTTATTCTTCG
AAACCCAATGCATTTATCTCAAGGAAGATGACGGTGGTCGACCAACAGCAGAATAGGAGG
TCTTTATTTAAAAAAAAGGGTCACAAGGCCCAGTTGGAATCACTGCAATAAGAAAATATT
ACTTAAATATACCTTTAAAGCAAATTTATGTCAAGATTAAATCAATCATATCACTGCTGT
GTTTATTATTATTATTAATACTAATATTATTCATTATTCTAATTTCTATAAGAAACTTCA
AATCCGACATGGCATAGAAATAAATAAATACCGTGGCACCACGTGGCCTCCCTTGTGACG
TCATCCCCGTGGCGTTACACAACCATTGGATAACAGTAATCCGGCCTAAAGGGAGGTTAC
GTCACATCAGCGGCTCCTTCCTGCTCACCTGGTCTGAAATGATCTTTGTAGACTTCACCT
CCAGAGAAGCGGCAGAAGGACATGCTGCAGCTTTACGGAGCAGAAGCCTCCTTCCCTCCT
TATTTCCGACGGGCTCCTCTCGTGACAGGTGGTGCAGGATGGAGTTCTGACGGCAGCTCC
TCCCCCTGCAGTTACCCGTGTTCCTCCGCTAGGTGTCAGTGTGGGAGCACCTTCACACTC
GAGTGCGTGTATATATAACCATATATTTTCATGCACGTGTGTGTGCGTGTATGCTTGCAT
GGTGCTTTGTACTTATAATTGACTTTTGATGCGTATCTTGTAAATCAATTACACAGAAAG
ATTATCGCAAAAAATCTAAACAGCTGTTTAGTTTCCTGACTGAGTCAGTCGTGTTTTTAC
ACAGACAGAGACAGACAGAGAGACGTGTAACCACCTGTAGTATTTTTCTGCTACAGTGGT
CGTCTCCAGGACAACGTTCTCCCTGAAGATGCACACGCAGACGTAGACGTGATCAATACC
AGAGTGACGAGCTGCGAGTAATGCGAAGAAATATGGAATCACACAAACAGGCCGACTAAC
CAAGAAGTCAATTTATTGTTGTCCCCTTGGGACACTTGGATCACGAGCATAGGCGCATCT
TGCTCGGTGCTCCTCATTCGTACTTGCAGTAGTGCTTCAGGGCCTCGGGCAGCTCCAGCC
AGTCGATGGCCATCCTGTGGACGATGTGCTTCTGGATGGATTTCCTGCACAACGTCTGCA
GGGACGAGACTGAAGCAACAAGCGGTTTGTGGTTTAGCGGAATCACGGTAGTGGAGACAA
ACGAAGGACAGTTGATGATAAAACTATTGACGGGTTGCTGAATTGGCCCCTTAAATACAG
ATGTACCGGTACAATCACACAGAAACAAGACTGCAACAAAAAGACTGACAAATACGAAAT
GACTTCTGAAAGAACGACACGGATAATGATTATAAAGAGACAAGAAATAAGCACAGAGCT
TAAAAAGACTACAGGGGGATGAACACTGATTGAAAAGATCCAAAACAACCACATACAAAT
AGATTCAAGACGACCTCAGAGAGACACAACATCACCATGTCCTCACTCAAAAAGACACAC
AAAGTGACCTCAAAGAGACACACAATGAGCAGCAGGCAGCATCTACAGTATGTGGGGTTT
TGTCCCCTCCAGAGTCTGCGATTATCAACGTGGCACTCACATCCGTACTCCACCTGGACA
ATCCGGACGCACTTGGTCGCGGCGAAGACGTCCACCACGGCGTGGAGAGGCTGCACGGAG
GGAATCCCCTTTGCGGAAGCTCCCATGTCCTCCCCATTGATCACAATGTGCATGTCGGCC
AGGTCTCGCCCTTTGGCCACGTACAGCACTCCTATCCGGCTGCGTCTGGCCGTAGGGGGC
AAGGCGTTGGTCTTGTACAAGTCGTCCAAAATGTGGCTGTAGCGGCCCGGCCTGCTCCGT
CCGACCAGCTTGTCCAAGGGGATCCGAACATCGTCGATGTCCAGGTGAGAGTCGGTGAAG
AAAGTCTTCGGTTTGCTGTTGTCTGCCCCTCCGTCCCCTTCGCCGGCCTCCCCTCGTCCG
AGCCTGTGGCCCCCGGCGGCTCCTCCGTCCGCCGCCTCCACAGGGTCCTCCGCGATCTTG
TTGTGGTTGCGAGTGATGGCGAACACCCAGCTGTCCCCCGAGTCCGTCAGGTCCGGGATG
GAGTACTCGGGTACCGCGTCCAAGCTCCCGGGGTCCCTGGCGGTCAGGCCCACCCGGAGG
TGGCCGCACCAGCCCAGCTCCTTGTCCTCGATCTCTATGAGAAAAATCTCCCCGGGCTTC
AGCGGCCGTTTGCTGAAACACACTCCGTTTGCGAAGCTCTCCACGCGGGTGGCCTGCGTG
CCCGAGAAGTCCAGTCTGACGTTGGATCCGTGTACCGGATGGAATTCCATGAACTCATCA
GGAAGGGGCTGCATCCTGTCCGAAAGGCGCCGACCAAACGGCCTGTGGATCCTTACAGGA
GGCACATGGTGGGAGGAGGTGCAGCGCGACACTCTGCTTATCTGTGGGACACTCGCAGGA
GCTATTTTTGAACTACATGCACCAACAGATGGCAAGGTATGTGTGTCTGTGTGTGTGTGT
GTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGGGGGGGGTGGCCACC
ATGCACGTGCCCACAGTCACACTCATACACAAAGATTGAAGAGGGGTTAAGGGCAGTAAC
AAAGCCCCCGATCCCCCAGGCGACCGCCCTCATTCAGTTTCACCAACATGGAGCCATATG
GCGAGGAGACGTTGGACGGCCTTTCATAGCTGCACGCTAAATATAGTCGGTACAGTCGGG
ATCTTGTTCTTATGCAAAGCAGAAAGTAATATTCCAGGATGGGGAGGGCTGTGGACATTT
ATCTTGCTGATTTATCTGGTGGAATTTTGCATAAGAATGTGCAAGACTACTTACTTTACT
CTATATATTCATTGTGCATGACTTGAGTCATATTAGTTATATGATCATATCTGATATAGT
GGTTACATAACAGGTTAACGTGCAGTCATTTGCAGCATTTCCTTCGTTGGTCAAGCCTTT
AAAACGAGCATCCCCGACGTCCTCCATCAACCTTCAGAGCGGTACTGATGAGATCAGATC
ACTGATCAGAACTGATGCTGCAGAACCTCCGGGGCGTCGGTGTGCTGGTCTGCGTCCACC
AGCTGCATCTCCTTGCCTCCACCATGCCGGTCTCTCTGGCCTCCACCTTTGGAACGCATG
CAGCCGGAGCTCCGGGGCTGCGAAGCAGGTGGTCTCGGCGCAGACAGCAGGCTGACCACG
AGTCACCTCGTGACTGTGCAGGCTTCCACCCAGGAGGCCCAAGCTGAAGGATTTCTGATC
TTTGAGAAGAAAAGTGATGCTATTACAGTTTCAACCCCTTTTACTGTAACTTCCCTGCGT
GGATTTAGAGCATCTAAAGCCCCCAGACAGTAGAAAGACATCAGCATTTGTATATTCCTG
TAAGCGGGGGTGGAGGGGGGGTGGGGGGTGCTGATCAGGAGCACAACCTCCTCTCCCTGA
TGGATGGGGGCCATTGTCTCTGACCCGATCCCTCGGCCCGTTCTTCGCATTGTCATTTCT
AGGGCTTCTGGTGTGTAATGTAGGCCAAGATGGGAAGGGGGAGGGAGACGAGAGACACTA
TTCGTTATGTCCGCTTTGCTCGTTTTCACTGTCGCTGGACTATTTTTTTTAGCATTTTTA
CAATTGAAAACACTTTTTGTATCTGTGTTTGCCAGATTATGACATGCCGCTAACCCAACG
CTGAACTTTAGCTGTCAACGTGTTTCATATTCAGTAATTAGACAGCCTTTCCACAAGTGT
GGGTGAGCTCTGTGTGCGTCAGGACCCTTAATCTGGATTATCATGCAGCGCGGCCGTGCT
CTCCATCGTCAGTTTGGTGCGCTGTGATTCCCGGCAGCGCGCGACACATCTGGATGGAGG
CAGTCGGTGAAGGGGAGGTATGTGTGAGAGGGAGGGAGGGAGAGAGAGAGAGTGAGAGGG
AGAGAGAGAGGGAGGGAGGGAGAGAGAGAGGGAGGGGGGGAGAGATGCTCCACACTCGGC
GGGCGTTACGCATGCGTTTGGAGGAGGAACCAACAGACGACATCGCTGACCGGCGGCTTT
AGTCACAGTTCCAAATCATCTTTTTGTGTAAGTACATTTTATTCCTCGTCTCCATTTGTG
TTTTTATTCTTGCAAAACATCAGCGCTGCACATATTTGGAATTCTTCCAGTCTGCAGGAG
CATCTTTGCAGCGTTGTCTCAGTAACTAGAACTTATTCCGTCACGTCTGCACGTCCCGAT
AGGCTCGTGCTTTGTCGGTCTGCCAAGAGAGCAGTGCAGCTCTGTGCTGTAGTGGAAGTG
GAACAGTGAGTTTGTGACCTGAATTTCAGCCACGCGTTGTTTGTTTGGGTTTTATTTTTT
AATATGAACCTGGGGTTATTTTTGGGGGGCATCGATCTGTCAATTATTCTCACAATTAAT
CTAATTATTTAGTATCAGAAATGAGAGAAACGTGTTTTTATTCTGACCTTTGAGAAGCTA
TAGAGGACCAGACAAAGTTGACCCCTGTTGACAGGGGACCAACGGGCCACTACGTGGACA
CGTGGGCCTTGTGTCGCTTTGTGGCCATTGTTTAGAATCTATTATCAAACTCATCCAACA
TTTAGTGACTCTGTACAGAAACATCTGCATCTGCCCTGCAGCATCGAACCAGAGCACGGA
TGCTGCTGATCATCAACACGGCGTCGGGAGATGAGCTGTCTTGGAAACGCACCCCCTGGA
ATGTTGGTTTAGCCCGTAATCCGGCTGTGATTTGTCCGATTTCAAAGTAAAATCCTCCAT
TAATGTTAATCTGAGATTGC
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