SelenoDB
Release 2.0
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Promoter Report for SPR00001170_2.0
Identity
PromoterSelenoprotein U (SelU)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001170
Promoter release2.0
External IDNone
Transcript SPT00001105_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001170_2.0 # Promoter # Selenoprotein U (SelU) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
CCGTCTGCGGCTGCATCTCCGTCTCCGTCTCTCCTCTCCGCCCCGGTCAAAGCACCACGG
GGTGCGGCTGCTGCTGCTGTGTGAACGCGCCGCGGATCAACGCGCGTTTAAATCCCACCT
ACAGCTGGTGTTCCTCCCCCCAAAAAAGTAAACCCCAGCTTTGTTTGGCACCGAGATATC
TATCAGACGACGTGATGTGACGCAGCTGCGTGTGATAAGCGGCACAGACATGCAGTCTGC
ACGGCTGATACCGGAGTAAAACATGAAATACGTAACTGTCATTTTGCACAAGCGCTGTTG
GTCCTCCTCCTTCAGGTCAACGGTCACTGGAGGGAATGTGCACCGTCATTCTTTCAAAAC
ATCACACGTGGCCTCAATGTGGAGAGCTTGTACAATATAATGAGTCAATCAGTGTTGTAA
TCTGCATTATTGCATGTGTTGCAGGAATAACTGGGACAGAGATACATAAATAAGAATGAT
AATTAAATACATGTGTTGGTAATAACAGTTTCTTTATTGCTTTTTTTATTCGTATCAATC
TACACATATGTTCTATAATATCCAGTCTATAATCAACACATTTAAAAAAAAAAAGATTGA
TTGTTAGACAACACTGTTGATCACTACTGGTCTGCTTCTTGTTCTTCTTTCTGAAAAACA
AGACAAAATATTTCTATACAATACATTCAACACTGAAGCTGCAACAGTGCCACCTATCTA
CGTTGTTGGTATGACGTTAAACCTTTTTAACATCATCCCCATGAATAATTATGCCCATGA
TTCGTCGATACCTTCTCTTCCTGCTCCACATCCATAGAAATGTCAGCCTCTTCTTGAGTT
CTCTCGCTGGACTCCGTCCCCTCGCCACTGTTGCCTGTGGCCAAACTCTCAGCCAGAGCC
GAGCCATTGGCTAGCGCCGAGCTGTCACCTGGACCTGTGCTGTCAGCCGGAGCCGAGCCG
TCTGCTGGTGCCGAGTTGTCACCTGGACCTGAGCCGTCTGCTGGTGCCGAGTTGTCACCT
GGACCTGAGCCGTCTGCTAGTGCCAAGTTGTCACCTGGACCTGAGCCGTCTGCTAGTGCC
GAGCTATCACCTGGACCTGAGCTTTCAGCTGGTGCCGAGCTATCAGCAGCCTCAGTGGAG
CGTTGCCCGTCTTCCACCTGAGATGACGTGGACATAAAGGTTGGTTAAGCATTAAACGAA
GCAGTCATTGACGTTCTATCCTTTGATTCCGTTGCTGATTGGCTGACCCTCCACGGCCGT
TGGCGCAGTTTGGTTCTCAAACTCAACATCGCTGCCTCCCGTTTGTTACAATATAATAAC
AATCAGGCACCTTTTCCTGGTTTTGAGGGGGAGGATCACTTGATTCCGGTGTCTCCTCTG
GTTTGGGATCTTCGCTCTGTGGTGTCGACTCCAACTTACCGGTTTCCTCTCCATCAATCT
GTCAATGAAATTATACGGTGTAAAGCATTAATGGATCCCGTTTTTTCCAGTCCAACTCCT
GTCTGTACTTTCTGCACCTGTGCAACCATGACATTTTGGACGAGTGAAAATCCTCCTCCT
CGCCTCAGCTGTCTTTTCCTGCCGTCACCTGGCCTTTAAACTCTGAATGTTTCTTCAGCT
GACTTTGTCCTCGAAACCTTCTCGACACGCTCATCTACCTGTCATCTTTTCTTGCTCACT
ATCCTGCACCTCTGACATCCTCAACCTGCATGGCATCCTAAGTGCTCCTGCACGTGGCCC
TTATCTCGTCACCTTCTCTGCATCTTGAGGGATGTGTCTGTTCGGCAGATCTTCTGGTTT
CAAGTCGGAGGGGACTCGACTGGGAGTCGAGTGCAACGCTTCGGTCATGTCCGCTTCATC
AGCGACCGCTTCATCAACGGCCGCTTCTTCAACGGCCGCTTCTTCAACTGCCGCTTCATC
AACGGCCGCTTCATCAGCGACCGCTTCATCAGCGACCGCTTCATCAACGGCCGCTTCTTC
AACGACCGCTTCATCAACGGCCGCTTCTTCAACGACCGCTTCATCAACGACCGCTTTAAT
AGCGACCTGCAGAGAAGTTGCGCAACATAAAAACATGAGTTGGTGCTTTGCCTTTTAACG
GTTAAACCCTTGTGGTGCTGGAATGGCACGGATGTAATTTTCCACAAAAAGTGTCTCATC
ACCTTTTCTTTATCTTCGTCCACTTTTTCCTCTTCTATTTGATTGGGGGTTGCACTTCTC
TCCTCCCCACTCGGCTCCACCTCCGTTTTCTCCTCCTCCACTTTGCTTTGTTCAACAGGC
ATTTCTGCAGACTCCTGCTTGACCTCAGTGCTGAGGGCCTCTGGGAGGGGAGGGATACCC
ACCTCAGACGGTTGTCTTTCGTGCGACTCTGGACTGGGGGCATTATCTGTGACCTTCACC
CGGCAGACACACCACCTCATTACATTTGAAGACATTTGGCAGACATTTCCACACCACAGA
AGGTGAGTCATGCATTTTAGAACAAACAGAAAAGACCCGATTAAAGCTTGTTAATCCAAA
CCAAAGGTCAAAATCTAACCACTGAAGCGATTGCATTATAGATCACCACCACCACCTGAA
ATACACAGACTTTTACTGTGACTGTCATCACCTGCTGGTCAGTGTCCTTTTCCTCAGCTT
TGGTGTGGTGTTCGTCTGTGTCCTGCTGGGTTTCTGGATCAGAGGGTTTAGGTTGCTCTT
CTGTCACAAGCTTGTTGTCCTCAGCAGCTGCGGTTATGGCTGACAGGGGCCCATCGTGCT
TCTCAGAAATCTGTGGATGTGACGATTTGGATGCGCTCCTGAAGCTCAGGATATAATGCA
CGGAGTACAAATGTACTCCAATGGAATTGAATTTCTCAAACCCACCTCCTACTTTGTGCG
TCCCACTGACTTCACCTCAATCGCCCTCACTTTCCTCTTTCACCCCCCTGTCTCCTAACC
AAATTCTTACCCTAGTAACCTCTGCCCGTACGACCACCTGCCCTCTTGAACCCATTCCAT
CACATCTTCTACAATCTATCGCACTTGACCTTCTTCCTTTCCTCACTTGTCTCATCAACA
ATGCTCTGTTATCTGGCTGTTTTCCCAATTCTCTGAAGGAGGCAAGAGTCAACCCTCTCC
TGAAGAAACCTACCCTCAACCCTTCTGAATAAAACAACTACAGACCGGTCTCTCTTCTTC
CCTTTTTGTCCAAAACCCTTGAACGTGTGATCTATAACCAACTCTCCTCCTATCTCCACC
ATAACAACCCCCTTGACCCCCACCAATCAGGCTTCAAGGCCAATCCACAGAGACTGCTCT
CCTTGCTGTCTCAGAGCTCCACACTGCTAGAGCCGCCTTTCTCTCCTCTGTCCTCATCCT
TCTGGTCCTCTCTGCTGCATTTTACACAGTCCTTATTTCCTCCCTTCAGGAACTTGGTGT
CTCAGGCTCTGCTCTCTCCCTTCTCTCGTCCTACTCCACTCCTCTTCTCTCTTCACTGGC
TATCGTTGGCTGCCCGGATCCAATTCAAAACATTGGTGCTCACGTACCATGCTGTGAATG
GATCGGGTCCAGCTTACATCCAGGACATGGTGAAACCCTACATCCCGACCCGCACTCTCC
GCTCTGCATCTGCAAAACTGCTCGTCCCTCCCTCACTGAGAGCAAAACACTCCACTAGAT
CTCGACTCTTTGTTGTCCTTGCTCCAAAATGGTGGAACGAGCTCTCTGAAGACACCAGGA
CCGCCAGGAGAGCCTTCACATCTTCCGCCGCAAACTAAAGACATTACATTACATTACAGG
TCATTTAGCTTATTCTTTTATCCAAAGCAACTTACACTACACTTTAAACGCATGGCTTTT
ACATTTTTGCCTGGGGAGCAATTAGGGGTTAGGTGTCTTGCTCAGGGACACTTCGACTTG
AGACATAGGGCGGCCGGGACTCAAACCACCAACCTTGCGGTTCCCAGCGCACCCACTCTA
CCCCCTGCGCCACATCGAACCCCTTCACCTCTTCAGACTCTACCTCGACTAAAAGACTAA
CAAATTGTAGCACTTATATTGTACTTGTAATGTCACTGATCTATAGCAAATTGTAAATTG
GCTTATTTGAGGAAATTGCACTTTCTTGTTTCTTGTTCTTCTGAGTTTGTACCCCTATTG
TAACTCGCTTTGGATAAATGCGTCAGCTAAATGACATGTAATGTAATGAATCGTATGTAG
ATGACTGAACCTGAAATGAACTTCCCAAAACCAGGAGGTGACAATCTTTACATTTTAAAG
GCTAATCATAACTAAATATTATCTCAAAATGCCTTTACTGAAGAAAAATAAGATCAATCT
TCAAACCAGTAAATATCCAAAATAAGGGGGCTTTCAGTTTAAAAAACATTGAAAAAAGGT
GTTTTTGTTACCTTAGCTCCTTGTAAACTAACTTAACACTGATTTTGTCGCACAACATAC
GTCTGTTTTTGATTCTAGCAAGGCCTCGCTGATGGTTCGCTCCTCCTCCCTCAGCTTCTC
CTGGTGCGTCGCCTCCTGTCTGGCTTTTGCCTGCTCCTGAGGCAAGAGCGCCAAAGTTGC
CTTTTTCTGAAAATACAAGATTGTGACAACAAAAGAAGTATACGTGACTGAGAAAAAACA
CTTCCACATTTGACTACACATTTTAAAGCCCCTACCCGACGCTTTACCTAAAAGAAAAGA
CAACTTTTAAGTCCCCTTTAATAAGCGCCTGAGGGAGCCATAGATTTGCAGCATAAGCTA
AAGGTAAAAGGGGACTGCGTGTTTGTTGCCGTAGACCCTATATGCTTAACCACACTCAGC
TGGAGGAGCTTAGACTCTAAGTCTGTGGCATCCTTCACAGCGCCTCTCATATCTGAAGAC
CAGAGCTGTGGGGTAGTTGTTTAACCATGTGCTTTACGTAAATAACGTTAATTGTTGTTA
TTATTATTATTATAAATTATCATAATTATGCTCATTATACCTTTTTTATAAATATATTTA
TGTTTTTAATCAGAAGTGTA
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