SelenoDB
Release 2.0
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Promoter Report for SPR00001179_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001179
Promoter release2.0
External IDNone
Transcript SPT00001114_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001179_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
TGCTGCTGCTGCTGAAGACGGCCGACGACAATGGGACTTCTGTGGGAATGTACAGTGTTA
ATTAGGCGGAACCTCCGAAGCTCAGCATGCTAACTGGCGTAGCAGAAGAGCACACTGACT
TTATGTCGACGCTACGTCCCAACGGCGTTCTTCTTCTTCTTCTCTTGTTTTAATGGCGAT
CTGCGTCCACTATGTTGAATTACCGCCACCTGCTGGTTTGAACAGTGCGCTGGTGAATGT
GTTGTTAGTGGTACATGTACTTTAAATAATAATAACTCAACGGTTTGGTTTGCTATAAAC
TTCAGAGATGTAGTTATTACCCTGCATACTGTTGAGTATTAAAATATAATCATGCACGCT
CACGCTAGAATGAAATTACACTTGAACTATAAATGCATAGTAATAATGGATGAAGGCCGC
TTAAAGGCCGGATTGCACGAACAGCATGTATTTCAAGTCACAACACCAGCACACGAACAT
GTAAAAAAAAAGCTCCACGCACTATCTGGGTCAGATGTAGAAAAACAGGAAACACCCGTT
TCCCATATTAAGAATAACATGTCCATGCTTGGAACTGCACTTAGCACTCGTAACACATCT
TGCAAACATCCTGCTATGTAGGCGTAGTGAACCCATGCACAGCGGGAAGCGCGGTGATCC
GAGAGCCTAGAGGGATGGACGTCCCTGTGCTCCAATGGGGCTCTCTGAGGGTTCCTAGCA
GGAGCCGCCTCCATCTTAATAACCAATCACAAATGCTCCTAAAGACTATATAAATCGAGC
GCACTTTGTATTTGTTCTTCATGTTGTTAAAATGCCTGAAATAGGTCCGTGCACGTTAAA
CTGCAGGACACGTTAAACTTGCCATATTGCTTTGAGTAAAGTCTAGTCCTTGTTTTGCTC
GCACGACAATACTTATGAATAATGTTCTGTTTAATATCATTTTCGTATGAAAACCCATAG
TTATAATCAGGCGGTGCTCAGGCACCTGCCCTTTTGCTCTGGACAAATGTGTTTTGATAT
CTGACCGGCATTTATTTGAGTCCTCGTGAGAATTTGGCCCTGACATGCTCCGCGGCGCTC
ACAAGCCCCTCCCCCCTCCCCGTGGTCATTTACGTCACATGACAGGTCGTTCTAGAGGCC
GATCCAGCTGTTTACTGATGTTTGTCGTGTTTAATGAGAGAAACAGAGATACAGGCAGAC
CGAGAATGTCAAGGCAGTTTTACGGTTCTGATGATGTACAACATTGATTTATTCCATTTA
CAAAATGTGCATTATGCTGCACAGAGACCCCAAAGGCAGAAGGACAGGGAATATATCCCA
GTTTTTTTAATTAGTTGTATTATTCATATATAAGCCGGTTTCTGTTGATGCCACCTGTAA
CTGAACCGAGGTATAAGAAGTGCTCTGCCCTGTATGTAAAAAGATGTATGCTGAGCACGT
AGCAGTGACCGTTTTCCCTTTGCAAGGAAATAAAGCTTAGTTTATGCTTCTGCGTTTTCA
GAGTCCCTTGCGTGTCTTTTCACTCCTTGCGTGTCGAGACATTTTTCTAGACGCGTCTAA
AGCGACGCAGCCTCCTGCAGCACCAGGCTGTGATTGGTCCGCTGACTGCGTCCTTTACGG
AGTCTCACGTCTCCGTTTTCACAGCACAATACGGCCGTTATTAAAAGGAAGATGTTTACG
AGAGAACGGATCAGATTGAAGAGCTTTTGTGGGAAGAAATGCGTAAATATGAGCACTCCA
ACCCGCTTCTACAATCCGCACATGACGGCTTGTAGAAGCGGGTTGGATTCACGGAGGGAG
ATCGCCGCAAACGCCGGTCGAGAGGAACAAAGTTGTGGAGGAAAATAAGGGACAAATGTG
TCCTTGATGAAAAGCAGCAGTGTCGATGCACGTGGCAATAAAGTCTATGATAAATAAATA
AACAAGTAAATAAATAAATAGACGTGACTCTCTAGGTCGTCTTCAACAAAACACGTGACT
CCGCCTGTTGTTCTGGAGGTGAATCGCTCTGCAACACACGCAAGACTTTACAACCAGGAA
GTGAAACGAGTGCGTCGACGCATGCGCAGAAGCATGCGCCAGCCTTAAACAGAGAAAGAC
TTTGATTTAGAAACTTTATTTTTAGAATTGAAGCAGTGAAAAGAAACCGTGTGATTCGCT
CTTATCATGAGCACCTTAATCATCGTAGGAGCCAAACGTTCACATCAAATGTCCGTTTTA
TTCTGTGCACTGGGTGGCGCTGTTCTCGGGTCCTGTGCGCACCTACATAATTGATTGGGT
AACAATTGACATCAGGTGTCGGATCCGGAGAGCGAAAGGGTTTTGACCCGAGAGAGTTGG
TTCCATTGGGAACAAACATTATATGTGAGGAATAAAAGTGAGATCAACGACACTCGAACG
TGTCGGTGGATTCTGTCTGCAGGCCGAGACGGACGCGGGGCGATTAAGGCTGGAAGAACA
TACAGAGCGATCCGGCACCACACCGGGCTCCTTCAACAACCACGGTCATAGAATTAGGAG
TGCTTTTAATCTCCATGTAGCTTCAACCCAGCCATCAAGAATACATTTCAATTAAAAGGT
GAAACATTGAATAACTCTGTTACCTAATTCCAACCTGCATTTACTGACATGGCCGCGTTA
CAAAAAGCTTTCCCATCTTCTCCACATAAAGTCTGATGGAGGTGATTCATTTAGCATCAA
AAACTCTTCCTGATTTATTCTCCACTGCCATAATCATTGTGGCGTAGAGCGGGCGCGCCG
GGAACCATGAGGTTGGCGGTTTGGAACCCGGCCATGTCGAAGTGTCCCTGAGCAAACCAT
GGGTTAAAATGTGATGAAAGGGTCAGCTAAATGACCTGTAATGAAGAACAGTCCATTAAA
ATGTTCTCACTGACAGTGGCATAGGGTCATGTCATTGTTTGGAGTCATAGCGTATGTGTT
GTACTCCATAAGCACCGACCTGTTGTTGTTTGGGTGGGCTGCGGCGTGATGTGGTTCCTG
TCTTTGAGCATCGATGGCGCTCGCACAGGACGTCATCGTGATGCCATAACAGGTCTTTGT
GATGTCTGAGAAGTCTCTCCTATTAAACGTCTAACTCAGCGATTCCCAAAGTGGGGGAGT
GATGAACTAATCCAGACCTGATCTGTCTCATCTTATCCTGAAAACGATCCAGCCAACTCA
GTCAGCCGTGGCCGAGGAACGAGGCCCGGTGGTTCCCAGCCTTTTACTTTATTTCCTTAA
ATGAAGAATCAACACATGGCAAAAGAAAGCAAATCACTGCTGTTGTAGTGAAGTGTGCAG
TACACCTCAGTGGAGCAACTTGTTACTGGTCCCCCTGTTGTGTTTACAAGCTAAACTTAT
ACACAAAAAACACATTAGAGATTTAATGATTACATACAAGAAAAAACCCAAAGTACTGTG
AAACCTGCAGAACATGGTGGTGGTAACATGGCCGAGCATCCTGGATCTCTGCATGTACAT
GGACACATGGACACATGATGCCGCTGAGCTCCACTTACTTTAAAGTAAGTAAAAACTTAC
TTTATTTCCTCAAGTTCATATTTTCTTCTGTACTTCTGGCTACTTTTTGGGAGTAAGTGG
ACCTACACAGCTACACAAAGTTGCATAGTTCTGCTCAGAATGAATCAACATTTTACTAAA
GTTAACATACAATCAATAACTCCCCTAACGACCATGATGTGATGTTCACAGAGCAGGAAT
GATGAGAAGCACATTGGGGACGACTAACCGCACACATCCTGCCTGTGAAACAAACAGAAT
AAGGCGGCCGGGGGACCAAAGACCACCATGGGGGGCTCAATCTGAATAAGCAATAAGCAT
CTGACTTGTGTTCTCTGCAGAGGGGCAGGAAAGGAAGGCTGCTCCTCTGGACCAAAGGAA
CACGAAGACGAAACTGAACCACAGAGGAGACAATTTAAATCACTAACGATCAGCTCAACA
AAGAGTATTTGGAATTCACCACCACATAATTATTATTAAGATACAGTATCCCACTAGTAG
TTAGAGATATCAGAAAGAACAACATTGTTCGTGGGCCCTTTTCCTGATGAAACGCCATAA
AGCGTCAACAGAAGGAGACGGAGCAGGTGATCACTACAGCTCATATCACAATTCAAGCCA
CAATGAAGAATTGAGACGCCGACAGCTCGTCGGCCTGCTGGGGACCCAAACAGCAAACTA
ATGACAAATGATTCCTTTCTTATTACCATTAATTAGGTTCTACCTCACCAAGCAGCGGAC
TGCGCCCGTTTGGATCTCCGGCCTAATTGAAGGTGCAGGCTGAGGTTAGTTAGCAGGTAG
CAACGCTCACCGTGGACAACGGAAGCAGGCAGCACATTGCATGGTTCTGCAGAGGGCCAC
ATTATCATGGACACCAGTCACGTTAGCTTCATACGAAGACATATTGTCCACACAGTCGAG
CCAAATATTCAGATTCCATTGAGTTTGTAAGGTTTGTTACATTCAGAAGTCCACATATTG
CACAGCGTGCTCCATCCATCAGCCAGATACATAGTATGTGTAATAAATGACCTGTTTAGA
GAGAAGAAGAACCCTCCACCAAACAAAAGGTCTTCACCCAATTAACCTCACACACTTTCA
GCTTGGTTCTGCCTACAAGGGAAAAAGGGCGGGACGTCTAACAACCTCCGCCGTTTCTAT
TGGTCGGTAGAGTTTGATGACATGACATTTTCAGCACAGCTCCACCAAACGTCCCCCAGA
AGGAGGTGGGACCCCTGTGTGGGAGTAAGCCTGCTGTCACATTATTACATGTATTATTTG
CAGAACGGTGAAGGAATAGAAAAATGAGAAGAAGTGTTTTTAAAGAAAAGTAAAGTGCGA
ACCACAAACCCCTCCTCAGGTACAGTACGTGAACAGAGCCAACAAACCCAACAAGTGGAG
AGGCTACATGTGTTGGAGACAGCAGATCCGTCCAGAGTCCAGACCTGAGCAATCTGAGTC
CACGTACACACACACACACA
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