SelenoDB
Release 2.0
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Promoter Report for SPR00001238_2.0
Identity
PromoterGlutathione peroxidase 3 (GPx3)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001238
Promoter release2.0
External IDNone
Transcript SPT00001173_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001238_2.0 # Promoter # Glutathione peroxidase 3 (GPx3) # Squirrel (Ictidomys tridecemlineatus) Full length # Forward
AATATCTACTTTCGTTCTGGGAGTCTAAAATTTTGTTATGTGCCCAGGTAAGAATGCCTA
TGTGACTATTCCTCAGTAACAATCCTGGGCACTGAGACTCTAATGAGCGTCCCTATCCCT
GGTGGACAACATTTTAGACAGGCTGTCATATTCCCTTGCTAAGGGAATTAAGCAATCCTG
TTTGACTCAGCTGAGAGAGGACTTTCAGAAGTTTGTACCTGGCATCCTCTGGACTTGGTC
CCACACATACTTTGCTTTTGCTGATTTTGTAATCCTTTGCTATAATAAATCATAGTATCA
GAAGGCTTTTATGCTGAATTCTGTGAGTCCTTGGAGGAAATCATTAACTCTGGAGGTGGC
CTTGGGGGCTTTCAACAGAGGATAAGGCTAGATTTCACAGAGGCAACCCTAGTCTTATAC
CAATCCCTTATGAGTATATAGCTCAAACCAGCACTGTCCAACAAAAATACAAGTCAAATC
TGATATAAAACATTATCGAGATAGTTTGACCTTCCTTTTTTCATACTAAGTCTTTAAAAA
CCAGTGTGTATTTGACAATCACAGTACACATCAATTTGGACAAGCCATAGTTTGAAGAGC
TCGGTAGCCACACACGGGGCTGCCATGTTGGACGGTACTGGGTGTAGAGATTTGTGGCAA
GGCCTCTGAAGACAGCATATCTGGGTCTGAATCCTGGTTCTGCCACTTACCAACTGCATG
ATCTTAAGTTACTTAACCTCTCTATGAGTTTCTTCATCTGTGAAATAAGGATAATGATGT
TAACTATCTTATGAGGTTGTAGGGGTTTTCCAAAAAGTTCATAAATCAAAGGCAGCACCT
GGCATATCTAGGCTGTTGGGTGGAGGCTAGCTGCTACTCTTATTATCTTAAATCTTGGCC
CTTAGAAATCAACTTGTCCAACTCCTTGCTCCATGATGAGAAGACAGGCCCAAAGTTTGG
AAAACATTTGTTTTAGAAACAAAGTCTCCAGTCTCCCACTCTTCCCTTGATTGACACCCC
CCCTCCCATCTTCCAGCAGACTTTGAGATTGGATCTGCCAATCATATAGGAAACCAGAAG
CTCCAGGGCCCCACCTGGATTCTGCAATCCCTCCTTGATTGCAAAACAGGGCCACTGTTT
GAAATTGGCAGCAAAGCATTGGGGGCTGGGCCTGCTTTCTGCTGCCTCCATCTGGACTTA
TGGATTGGGCTGGGCTGACCATATCACTGAGTCTAGAACCTAAGTACTTACTCAGCAATA
GCAGGGCTGCTTTTCTTTGTCTTGGTTTTTCCAGCCCTTTTTGTTTATTAACTCATGTTC
TATCTTCCTTGGAGGTACAATTCATCAGCACTTTCAACAAACAAACCTGTTTAGTCATCT
CTATTGCTGTTTACCCACTAAGCACATAGTTGGTGAGCTCTTTATGTATATCTCAAGGAA
AGAAGTCCAAGAGGTAGTGGGCAGCCAATTATCCAGGATGCAGAAGAGCACATTCTTAGA
CTGAAAACAAAACTAGTTTCTGGTTTTTCCATAGCATGTGTTTTTACCCTTGCTTCCCAA
AGCCCGATGTAAATCATCTACTCTCCAATGACTCAGAGCAACTCACATGGTAAATCCTAC
TAGCAGCTGAAATCTGTCTTGTGGGCTCCAAATTGTTAGCCCATGTTGGCCTGAAGCTCT
GCCTATTCTATATGTCAAATAGCGCTTTGATTGACATTAATTTATTTAATAAATATATAT
CAAGCAGCTAACAGATATCAAATCCTGTTCAAAATACTAGAAATAAAGTCTTTGTGGATC
TTATCATTTAGTGGAGAAAACAGGTAACGAGAAACGATGATAAAGAATGACAAAGGAGGG
ACTGAAGTTGTGGCTCAGTGGTAGAGCACTTGCCTAGCATGCGTGAAGCTCTGGGTTATA
TTTTTAGCACTGCATATTAAATAAATGAAGAAAATAAAGATCCATCAACATCTAAAAATT
ATTTAAAAAAAAAGAATGACAAAGGGTTGATATATAGAAAGTGCCAAATACTCCAAGAAC
TAGAGTAGAGCCAGGGAACCTGAATAAAACTCTTCCCTTAAGAAGTGTCACTAGAGGGCT
AGGGTTGTGGCTCAGTGGTAGAGCACTTGCCTAGCATGTGTGAAACACTGGGTTCGATTC
TCAGCACCACATAAAAATAAATAAATAAAATAAAGGTATTGTGTTCATCTACAATTAAAA
AACATATTTTTTAAAAAAGAAGTGACATTGACAGAGACCTCAATAGTGGGTAGAAAAAAA
CCAGTTAAAGAGAAAGTAGTTTGGATGTTTCCAGCAGAGGGAATGGCAGAGATAAAACCT
GGAGGTGAGACTGAAGGGCATGTACAGCTGCAGTGTGTTGGAAAAACATGAAGAAGTGGA
TAGATGTTGAGGGCATTATCGGAAGCACTAAGGAATTGGAACTTTAACCCTAGGGCAATT
GAGAACTGCCTGGTGGAGCATAACATCTTTCAAAACATGAGTCCCTGGGAACCAATCAAC
CAAATGCGCTGATGGAAAGACTGGTAGGTGCTGTTTTCATCTTCATCTTCATGCTCTTTG
GTCAGTGATCAGACCTCCTCTGAAAGTAGAATGCAGCAGGGTCTCCTCAATGCCAGGGCA
TGCACCCCACCCAAGCCTCCCACCTCACTGCCATGTTCTCAGGGCTCCTAGGTTTTGTGT
GGCACAGGCTTTTCTTAGACCCTGAACTGAAAAGCCAGGGGGGCCACTGCTGAGAGATTG
TCAAAGACCCTTGTTTCACAGGTGGGCCAAATGAGACCTTGCAAAGGAAAATAACTTCTC
TGTGACTCTATAGCAACCTAGAGCAGCCCCTTAGGCCTCTGGATCCTTCTTGCCCCCCAC
CCAAAGAAACTGAACACCAGCCCCAGGACTCAGGCCAGACAAGTGAGGAACATAGGGTGC
AAAACTTACAGTGACGTTCCCTCTTAGGTCCTGCCCTGCACACTTGCATAACCCTAGGTG
TCTCACTTGCCTCTCCATAGCTGGATCTGCTGGCCGTACCGTTGAGGGCAAGGACTGTAG
CTTCTAGAAACCTCTTCAACATTTCTCATGGTGTTAAGTGCTAGGTATATACTCAGCTGG
GTCACTGGATGCCTACTGGTGCTAATGAAAATGGATTTCTGATATATACCCAGATGTTTG
TATCTTTGGGCAACTATGAATCTCAAAAAAATCACAGAACAACATTGAGAAGATCCGAGA
CTGGAGTCTAGAGACCTGGATTATGGTTTCTCTTCTGCCACCATTTTGCTGTGGGAACTT
GGGTAAGTTGTTCTCCAACTCTAGGTTTCAGTGAAATGAAGTATTTGGATAAATAATATT
GATTGAGCACATATACTGTCAGTCACTGTTCATATTCTTCTGTGCTTTAAATTGTCTAAA
GACTCCCTGGCTTGGTGCAGTGGTACATCCCTATAATTCTAATGACTTGGGAAGCTAAGG
CAGGAGGATTGCAAGTTCCGGGCCAGCCTCAGTTGTTTAGTGAGCTCCTGTCTCAAAAAA
TAAAAAGGGTTGGGGATGTAGCTCAATGGTAGGGCACCCCTGTGTCACACACACACACAC
ACACACACACAAAAAAAAAAAGATTTCTTGGCCTCTAAGATTCCTTCCATTTTAATATGC
AAACATGTTGTGGTTTGAGGAAGAAAGATTTCCTGAAGAATGAGAAACAGACCTTTCAAG
AACCTCTGGTTCTTGAATCATAGTTAAGGTAGTACTTGGTCAGAAGAGATTTTTAGAGGG
TTCCTAATCCTGAGACTAATACCATGAGGACTAAGGGCAGGATGGCTGCCTCAGAATCAC
CCTAGGAACATGTTGGAAGGCAGATTCTCAGCCTCTCCTCCTAGAGATTCTAATGCAGTC
ATTCTGAAGTTGGACCCAGGAATCTGTACTAATGGCTTCCCTGGTACTCAGAAAAATTTG
TGAATTGCCGATTTCAGCCCATTCCCCATCTGTAGGTAAGATTATGCCTGCACAGTAGAG
ACCTACAGCTGCCTGGCCTGATGGGGAGTATCTCCTAACAGAGAAACACATTTAATGATT
GATTAGCTCAGCAAATGTTAAACATCTACTGAGTTCAGGTCCTGGCCAGGTGGGGATCAT
GGGCTCTACCCTCAAGTGATTTCTGGGCTAAATCTGTCACTTAAAACTCATCACTCACCA
GAGCCAGAAGGGCCCGAGAGATCATTAACCAATCCCATCATTACACAATTGGGGAAACTG
AGGCTCAGAGAGAAAAAGCAAAGTGCCCAAGACTGTACAGTTATGTATGTAATATTCTTA
TGTGTCAATTAAAAGAAAGAAAAAAGACTACACAGAGAGCAAAAGTGTTTTCTGCTGCCA
AACCAGCAGAGGCATCCCGTGCCTTACCCAGGAGGGGAATGCACTGAAAATCCCAGTTCA
CCTACAATGTTTCTCAAGTACTATCCTACATATGGTAACTGTTCCAGAAGGTCTAACTTC
AGATCTTGCTGAATTTTAAAATCATCAACATCAGGGCAAGACCATCACAGGGTAATTTTT
AAAGCCTGGGGAGTAAGAATTACTTCCCAGAACTAAACTACCCATCGGTTCTTGGGTGTT
TTGGGGCCCCTTGGCCCTGGCTGATCTGGAGAACATTGTGCTTGCCTCCTCCCGCACTTT
GGAGCCCTAAGAGGAGAGGACCGCCTCCGGCATTCACCGAGGACCTCACTCCCATCTCTC
TGCCCAGACTTGCTTATGTCACTGTCGCCCAGGGCCTGGGGAGGGGGAGAGAGAAGGGCG
GGCGCGACTTGCCCCTGAAATCCTAGCTGCGCTGCGATTGGCTACGAGGATCCCGACCTG
GCCGCGGATTGGCCACCGCTGAGGGCTAGAAAGGTGACTTGGAGCTTCGGACACCTCAGA
CAGACGGTGATCCGGCAGCTGACAGCGTCTGAGGCACGCCTGAGACGCTCCCCCAGCCAG
CCATGGCCGGGTTCCTGCGG
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