SelenoDB
Release 2.0
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Promoter Report for SPR00001262_2.0
Identity
PromoterSelenoprotein O (SelO)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001262
Promoter release2.0
External IDNone
Transcript SPT00001197_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001262_2.0 # Promoter # Selenoprotein O (SelO) # Squirrel (Ictidomys tridecemlineatus) Full length # Reverse
TTCATCAAAGCTCCACTTTTCCACCCTACCCGTTCACAAAAATTCCAATAAGTGGATTCT
TCTATCCCCTTCTATCTCATGTTTGTCCTTGTATCTTTGAGCCAGTAGAATGGATCCAAG
TGCTATCTCTTCACCTTGTACAAGCAGAATAAGATCATTTCTGAAGCAGATAGCAGGGGC
TCATATGTCTTCAAGAACTTTATTTGAAATTGCTATAAGATGCATTCTTGACTTGAAAGA
AATAGGAAAAGCAATTGAAAAGACAGTCCTTCACTTGTGAACATGATTTTGAACCGGGTC
AACTGGCAGCACAGCTGTAAGGTGTTCAGAGATGGAGCCACTTGAGCCTCCGTTTCGCAG
TAGCCCTGGTGGCAGTTTCATTTGTTGCTGGGAAAATGCACAATGTCTGCACTCGGCTCA
AGATCAGATGGTAGTAGGCAGTAGGCGATGGCCCCGCTAGTTGCACCCAAGAGAAGCAGA
CAGAGAAACCATAGCCTCTAGATTGGGCAGCAAAATAGGAACTCAATTATTTGAGTCATG
TTTCCACCCCAGATGGAAGGTCATGTTCAGTTTCTCCCTGGCAGAGCTGGCCAAAGGGAG
GTGACAGGTCCCAGCTACAGGTCTTCCTTCCCCCAGCCCTCCTCCTCCCACCTCTCCAGA
TAGGCAGATGTCCCCCCTGGCCTCTGGGTCAAGGAGGCATCCAAGGTACACCTAAAGAGT
GCAGCAATTGAGGGTCACTCTCCTATCACTCTTCCTGCCCTGGGAAGAACACAGGGAGAT
TGTGTTGGTTGTCATGTGTGCAGGTCTTTCTGCAGAACATAACTATGGCCTCACCTCTGT
CATGAACCCCCAGAACTTTGTTTAGGGTTATCCTCAATGACAGTCCCAAAATGTCACAGC
TGCAAAGAACCTGAAAATTATTTAGCTCCCTGGTTTCCTAACTTCATCCTGGCAGAGTCA
CGGATGTTGTGGGAGTACTGTGCGGCTGTGAGGTGGAGGACAGAGCCATCCCGCCCCAGG
TGGTCTTTTAAATTAATTTTTAATTATATGAGAAGTTTGAGAACGCATCCTACGTTTCCC
CCTTGATCATTCTTGGTGGAGGGTACTCTCTGCTCATATTTTCAGAGACGGTCAGTTATC
ATCCCCAAATCTCTCAAAGTCTGGGGGCTGCATGTCAAGTTCTTGAAGCCCTCCCTTGGT
TTAGAGTAGGGGAAGTACCCCTTTACCTCTCTCACGGAAGGGGTGGGGAAGGACACTGTC
TCGAATGCCAAGCACCCATTCTGTGATCTCTCCTGACTTCTGGTTTATTCTCAAGGCAGG
GAATAAGCTAACGGGTGAAGAATGGGCTTCACAAGCTTTGGACAGGACTGACCTAGCAGA
CTGCCATCTTGGGCCATATGCTCGTCTTGGAAACACCAGCCAAACCAAGACAGAAGGGGT
CCCCTTGCAGTGTCCTGTTACTGATGGGGACACAATTCTGTCCTTTCTTCTGAACATACC
TAATGAAATATATGCTCATGGGCCTTTGTGTTTTTCAGGGTGCAAGAGGGCCTAACGGCT
CCGTTGGTGAGAAGGTAAGAGAAAGCAAGTGTCTCTTCCCACTTCCCCTTTCCTGGGGTT
TGCTATTGTTGGGGTTTGGGCTGGAGCATCCCATGCAGAAATGTCACGAAGCACAGACAA
GCACACCTCAAGGAGCTGCTCAGGGAGGCTGGTGGGGAGCTGATACCTGCTGGTGGGGAG
CTGTTTCCTCCCCCACACACACACACACCTTACAAACTCATTCCTGCGGACCCATCCGCT
TCTCTCCAAGTGAAATGTCAGTTAGCAAGAGAGCTGTTCCTGTGCTTTTGAGCACAGGTC
AGAGAACACATCTGCCTAGTTGACTTCAGAGGGTGGTTTTCTGACTCAGATGTTTAAGTC
CTTCCATGAGAGAATCTGGGGGCCTGTCATCAGCCTGTCCTCTTCCTTACAGGGTGACCC
CGGCAGCAGAGGCTTACCAGGACCACCTGGGAAAAATGGACAAGTGGGCACCCCTGGAGT
CAGGGGACCTCCAGGGCCTCCTGGCCCTCCTGGACCCCCAGGCCCTGGATGTACAACAGA
ACTTGGATTTGAGGTACTTTCCCCCCTTTCAGTGGTTAAAGAATCATGTGCATTAGGGGC
CACTGGAAGGACCAGTCCCCTGAATGCTAGTCCAGTTTGCCTCTGAGTTACCAGCACCCC
AAACCACACTGGCATGAGAGGGTGCTCCAGAATCAGATCTGAAAATCTCATTCTTCCTCC
TTCCCTAGGATACCGAAGGCTCAGGAAATATCAGGCTGTTGAGTGAACCCAGAATCTCCG
GGCCAACTGCTTCAAGTGTAGGTTGACTTTTGAAACCTTCTTATGAGGACAGTCTTGCTG
TGGCACTGGAGTGTGGAGGCTGGGGAGGGAGGTGCACATCCTGGCTCCACCCCTCAATAA
TTCACCTGCCCAGTGCCTTCAGCCCCCACCTGTGCAGTGGGGAGGCTTTGCATCTTGGAA
GGTGCAAACAGTTTCTCCAGGGAGAAGCAGTTTTGCACAAACTATCATTTGTGAAAATTT
GAAAATTGTCTTTTGTCTCTTCATCTCTCCCCGACCCCCTGCCTCCCTCCCGCTACCATA
CGGAAGCTTCACAGTTTGGCCCATTTCAAAACCCTGCCCTCCTGATAGGCAGCCTCTCTG
CTCTGTCCATTCCTGGGAGGCACTGTCCATGTCCACTGTGATGCTCTCCCCTGGATTTCA
TTAGCTTTGTCCCGTGGGACCCTGAACTGAGCACCCAGGAGCGAACAGCATGGCCCTTCC
TGTAGCTGAACATGCAGACTTCCCCCCTCCCCCAGATGCAGGGGGCCCTAAGACTGGAGT
CGAAGGGACACTCACCTGGTGCCGGGAGCAGGCCTCTGAGTTTTCTTCTCTGAGGAATTT
TTTTTCTCGCTCTGGGAGGGGCATCTGTCCCTCATCCCTTGTTCCCATTGCCTGGAGTGA
AACCAGGGGGAGAGCTGAGGGTAGACAGCAAGAGCGAGGACAGGGGAGCGGGCAGAGCGA
ATCCAAGAAAACCTAAGAATGGGGCTGGGGTTGTGGCTCAGCGGTAGAGCGCTCGCCTGG
AACATGCAAGGCTCTGGGTTCAATCCTCAGCACCACATAAAAGCAAATAAAAGAAAGGTA
TTGTGTCCATCTACAGCTAAAAAATAAATGTTAAAAAAAGAAAACCAAAAAATGTTCATT
TATCTGCCTGTTTATTTTCTCAGGGTCCCAAAGGGGAAAAAGGAGACCAGGGACCCAAGG
TAAGGTCACAGATCTGCGGTGGAAGGACTTTCCGGCCTGGTTCTGGAAGCATTATCCATG
CACTATGAATTATCCCCCCACTTCTCTCCACTGTAACCAGGGTGAAAGAGGGATGGATGG
AGCCAGCACTGTGGGACCCCCTGGGCCCCGGGGACCACCTGGGCGCATTGAGATCCTGTC
GAGTGTGAGTATCGTCCAGGGCAGAACTTGGCTGTGTATTTTCTCCCTTTGCCAAAGGAG
AGAGCAGGGTGGACTGCCACTGCAGGGTCTTGGGTGCTGGGTATGCAGGGCACGGAGCCA
GCACCTGGTGTGGGAGCCTTCACCTGCCAGCTTCCTCACCTGACTGGGCCTGCTCTAATG
CTACCCTCCTCACACGCCACCCCCCCAAACTTCCCTCTGGTTGGCAGTATTTGTGGTCAA
CTCAAAAGGCAGCCTAGGAGCATGAGAGGTTTCAGGGTCTTGAGGAAGCCCCAGCTAAGC
AGTCCCCCTCCTCCCCTGCCAGGTTCTGAACTTCATTGCTGATACAGGTCACATGGAAGG
CTGTGGTCTACTTGTGTGGGCTGAGTGTTCCTGCTCACTAACCCTAGAGTTCACAGACTT
GCCTGTCAGTCAGTGGACGTGCTTCCTAGAAGCAGGAAGACCCAAAAGAAAGAAGTGTGG
TGCTCTGCTGAGCATGTCCCTATAGGTGTCCCAAACTGTCATCAGAAAGGTCCCTGTACC
TTCCAGGATGGGAGTAAAGGGATCAAGAGAGGCCAAGGATGACATCAAATGAGCCCCCTT
CATGTCAAGGAAACGTGTTTGGATGACCCCCTGGAGAGCTCTTTGGCTGTCGGTTAAAAC
CAAAAATATCCATACTGCAAAATTCCACATGGAAAGATCTCCAAACTGGTGGAGGAAGCA
TCCCCTTCCCTTCTGACCCCCCAAAATCTGTGACATGTGGTTTTTTAGTTCATCATTAAA
ATTCCCACTGCACAGAAAGCACCTGGTAACAGGCCTGTCTCCTCCACTTGCCCCTGGGGA
TTTTTTTACTTCTCTGAGCCCCACATGGGGGAGGCTCATGGCACATGGGGAAGGCTTCAT
CAGCATCAGCTGAATGAAACCTTGGATGTCATCTAATTTTCTATTCCTATCACCAACCCA
CTGGCATAGGTATCAGGGACTTACACTCCACAGCCAGTCCCATGCTGGTCACGTGAATGT
GAAGATGCAGGGCCCCCAGTGCAGTCAGGACAATGGCTGTAACTCAGAGGTCAAGGAATC
TAAGTGGGGGAACAAGGGAGGAAAATTGGTTTGGGATATGAGAAATCCCAAGGAAGACTT
TCCGGAAGAAGTGACTTTGGGTAGGGCCTAGAAAACAGAGGGATTTTACCAAGTAGACAC
AGAGGGCAGAACTTGCAGAGCTGAAGTGGCAACCATACCCTGAGCCAAAGCAGAGAGTAG
CACTATGTGATTTGCCCAAGACTCGGGGAGCTGATGGACAGGAGTGGCAGGTGTGGGGGT
AGTTGGAGAGCCATGGGAATCTGAAAAGGAGACTGGAATGTGACTGGGATCAGATCATGA
CCCCCTTAATAGCAGACCCTCCCATTCATGCAAGACAGTGACCCTTCTGGGAGAAATAAC
ATCAAGCTGGTGGACAGTAGAAAGACAGAAAGTCCCAAATAACTGGGAAAAGGATCGCTG
GAGTTAAAAAANNNNNNNNN
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