SelenoDB
Release 2.0
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Promoter Report for SPR00001798_2.0
Identity
PromoterSECIS binding protein 2 (SBP2)
SpeciesOchotona princeps (Pika)
Promoter IDSPR00001798
Promoter release2.0
External IDNone
Transcript SPT00001733_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001798_2.0 # Promoter # SECIS binding protein 2 (SBP2) # Pika (Ochotona princeps) Full length # Forward
CGCCCTTCCCTAGCCACGCCTCTGACCGTCCAGGCCTCCTCCGTCCCCGTGCCTTATCCC
ATCCTGTAACTTCCTTTGGGCCACCTCGCAACAGGGCTCTGATTGGCCGCACTCTGAGCG
CGAAAGCGCCAGAGATGAGGCTATGATAGGCTGGCACCTTGCGCGGAAGGTGATTGGTCA
GTGCTCCCGCCCAATCGGCGGCGGGCTGTCGGATTCAAATCGCGAGCGTTGGGCCTGCGA
GGTCGTTGGTCTCAGTCGAGTCGTTGTGTGGTTGGACGCGGACGTGCTGTGTTTTCTTCT
CGCCCGCCGCGCCGGCAGGATGGCTCACAAGCAGATCTATTACTCGGACAAGTACTTCGA
CGAGCACTACGAGTACCGGTGAGCAGTCCACAGCCCTGACCTTCTCCGAGGGCCGGGGGC
CTTGGCGTGCGGCGGGGCTGGGGTCGCTGGCTGCTTCGGCCGGGCTGGGGTCGCTGGCTG
CTTCGTCCGGGCTGGGGTCGCTGGCTGTTTCTGCCGGGCTGGGGTCGCTGGCTGCTTCGT
CCGGGCTGGGGTCGCTGGCTGCTTCTGTCGGGCTGGGGTCGCTGGCTGCTTCTGTCGGGC
TGGGCGGCGGCGGAAGCGCGGGGACCGCCGCGGCGGGCAGGGGTGGGCGGCCTTGCCCGT
GCCAGCTCGGCGAGGGGAACGGATCCGACCCTTGGTGAGGTCGGCCCCTGGAGGCAAAGG
AAGTTTCTCTCGGCAGTTTAAAGTGCTTCGGAGCCGTGGTTAGAACCACCTGGCTTTTCT
TTTTTTCTTCCGGCCAAGGGCGAATGGGAGTTGAGCCCTGCTGGGGCCGTGCAGCAATGG
CGTCCCGACACCTGGAACGGCCCTCCGGCCCCGGGGTCTGTGCACCTGTGTACATATCCA
TTCAGGGCCCATAGTTGTGTTTTGGGGACCCACTTGCGGCAGCAGCAGCTGTGTCTGTAG
GTTTCCGAGCGCGCCCTTAACACTAGCTAAGTACTTTGGGTCTGATAAAACAGAAGCAGA
CTGGGTATGAAGTGGACAGCTTTACAGACTTTGTACCGAAATTAAGTTTGGGTTCTGGGA
ACTGTGCTCCCCACGAAGTTGGTTTTTACAGTAAGCCCTGATGGGAGAGTCCGTTTCTAT
GGATAGTGAGGAAGGCAAGAGTGTTAACATCTATGAAAATCACTGGTTGGCTTTTCGATG
TAGTTTATTTTTATAATAAAGGCAAGGTACAAAAGTATTAACCCCTCCCAGGTTAATTAA
CACTGTGGAGGGCAAAAGCAAGCATTTTGAAAATACAGGCTTAACGTAGGTGCTACTGCA
GAATTTCAAAAGTGCGTGTGCTAATGGCTCATAGCACGCTTCGGTTGAGTTCCTGGTCGC
AAGGTTAGCTGGCAGGGGGACACACCTGTCACTCAAGTCGAGCAGCTTCCTTCTTCTGAA
TATTCTAGATTGTTTTCTTTGTGCTTACTTGTAAACTCAGAGCTGAGAGTTGTGATTTAC
AAACTCGAATACCGTGCGTGGAGGAGTGCAGATCCGCTGCAGACATCACACAGCTGTGCA
CGTGTCCTTCTACATACAGACTTCTGTGCTGGCTTAAACTGAATTTTTGAATATAGAGCA
GTAACTCACTAGACAGCTGAAGGCCTGCAGAGGTACAAATTTTGAGCAAAATCCTTGCCA
TGAAAAGCATCTTCTAGTTACACCAGCACTGCATCTACCACCAATCTCTGCGGTACCAGG
AGAACCGAGGGCACTACCTCAGGGGCACCAGGCTCGTCAGCAGCCCTCCTGTGGGCAGTC
ACTGAGTTCCTGTGCGCCTTGATGGATGCTGGAGTCCAAAGGAGAGGAGGACTTGGCATG
TGCTTTCCACTGGAGCACACTTCACAGATGGAATATTTCCTGCTTGTCCTGTTGGCCAGA
ATTGAATCGCATGACTAGAGCCAGCTGCGCTGGGGCGAGTGCATGATAATGGCAGGAAAG
GCACAGAGCACTCACTTTGCTCTCTCTTCACAGGCATGTCATGTTACCCAGAGAACTCTC
CAAACAAGTACCCAAAACCCACCTGATGTCGGAGGAGGAGTGGAGGAGACTCGGGGTCCA
GCAGAGCCTGGGATGGGTTCACTACATGATTCATGAGCCAGGTAGGACTGGTGTGAGCAC
AGTGTTAGCCAGTTCTGATGGGCAGCAGAAGATGGCTGTGCAGGGAATCAGAATTGCTCT
TTTTAAATTTAAAATATATTTTTGATATTTACACAGATGAGAACAATTTATGCATATGAA
GATAACAGATGAGGATGGGGTGGACAAGGCAGGGCAAGGGGAAGTAGGTGTGAAAGTCAT
ATAGAGCGTGAAGGACAGATTAAGATCTTCTGTTCACTGGTTCACTCCCCAAGTGACCAT
AACGGCCAGAACTGAGCTGATCCGAAGCCAGGAGCTTCTTCCCCGTCTCCCACACAGGTG
CAGTGTCCTAAGGCTTTGGACCATCCTCGACTGCTTTCACAGGCCACAAGCAGGGAGCTG
GATGGGAAGCAGGGCTGCCGGGATTAGAACCGGCACCTATATGGGATCCCAGCATGTTCG
AGGCGAGGACTTTTGCCGCTAGGCCACGCCGCCGGGCCCATGCTGTGTTGCTTTTTAGTG
TTATTAGTTTGACTATGTTTTAGATTAGTTATAAATGCCACAGGCGAGCTGGCATTCAGC
CCTTCTTGTTGCTCCCCGTTGTCAGTGCCTGGCTTCAGGTCTCGGCTCCCAATTTCGGAG
CTGTCTTCTGCAGTCTTGGAGCGGACAGAAAGAACTCCAGATACAGTGCAGAAGTTAAAT
AAGGTGGAACTAAAGTGATCATCTGTACTGATGGAAAATGGTATTATCAAATCTTCCTTA
AGAATTCAGCTTTCTTGGGAATGGGGCGTGTAGCTTATACACTTAGTACAGAGAACCTGA
GGAAATTATTTGTAGATTCCTGGGCCCATCTTATTGAAACGACCTATCTGATAGTTTCTG
TTGCGCAGTAGTGTGAAGCCCATTAGCTGGTGACATGGGCGAGACGTCACTTCCTCCAGA
TGGCCTTTCTCTTCCTTAGCAGTATAGGTTTTCTACTTATGGACACTTTAGTAGGATAGG
TGAAACCAAAATGATGCCAGAATATCCAAAAAGTTGACGGTGCAGAATAGTGTTCAAAGT
TCATTTTAGACACTTGAAACTTGCTAGTAGTACTTGCTTGAGTTTTAGTCCAGCTGAAAC
CTTTATGTTAAGTAAAAACCAGGCATATTATACTAAAGTGATTTAAACATTTTCTTTGCA
GAGCCGCATATTCTTCTCTTTAGACGACCTCTTCCAAAAGATCAACAGAAATGAAGTGTA
GCTGGAGATCGTTCTATTCCCAATTTAATGTATATGTGTATATAAGGGTAGTATTCAGTG
AATACTTAAGATGTACAGACCTTCTGGCAGCCCTGTGCGTGAGCTGTATTCTTCACAGCG
ACAGAGCTCAGCTCCGGCCTGCCGCAGCGAGCTCCCCGGACGGGGCAGGGCGCTGTGCTC
TAGTCGGTTTTTCCTTGATGTAAGTGCCTGTTCACCTGTTACTTTTGTTAAATAAAAGTT
TGTATGTTTCATTTATGCCGCTTGACGTTTACTGAGGTGTATTTTTCTAGTTAATTTGTG
ATCGAAATTTTTATTTTAGCTCTTGGGAAATAAACTTAGAAAATAAAATGTCAAATGAGT
AAAAATGGCCTGGTGTGAGTGTGACCAGTGGGTTCTACAGCGTGTCCACTGCAATTCCTA
CAGAATTGGTGACTGCCGCGTGCGGCCCCCACGGACGGGGGGGAGGGGGAGGACCAACAG
GCAGAGCATTGGCGGGAGCTGATCAGCACCTGCGCACCGACCCCATCCCCATCCCCAGCG
CCGCAGCCCCCTCGAGGCTTTCCTCCAGCCTGCAGCCTTCCCTCCCCGCCCGGGCCCTGC
TGCCCCCTTCCTAGGACTGAAGGGTCCTGGGAAGCCGAGCTCTGCTTCGGCCCGCGAGCA
GGACTTGAAACTGCCCCTGCTTGGCACTTAAGGCCCGCGGCTAGCGGGGAGCTCCCCTTC
CCGATGACCCTTCTCTGCAGGCGACTTCCCCGGGGTGCCCCAGCCCGAACCCCCCCGCCC
CCCATTCAGGTCCCGGCCCCACCGGCAGCTCGGGCCGAGGCAGCAGTGCGACTGCGCGCA
GGGCCCGCCACGTGCGACCGGCACCGCCGCGCACTTCCGCCCGGCGGGCCGGCCCTGTCG
CGCTTTGCTGACGTGTTTCCTTGCGCCGCCAGGAAGGCGGAAACGCCGTGTGGCTGGTCG
GGCCCGTACCTCCACGACGCGGGTTCCCGGCTCCCCGCCATGGCGTCGGAGGGCCGGCGG
GAGCCCCGAGACGAGGTGCGGGCTCCCGGGGGCCGGCGGAGAGGCTGAGGTGCCGCGGCT
GGGCGGGAGTGGCGCCCGGGTCCCTGAAGAGACTCGGTGAAGACAAGCCCTTGCCGCAAA
ATTCAGATTCCAGTGACGCGGGGCTGTGGGGGTGATTCTGTAGCAAATCACGCTTTTGTT
TTGCAGTAAAACAAAGGCTGCTTGGAGTTTGCGGAGTAGAAGGCTTCTCTTTTTCGGGAA
GATAGAGTTGTGAATGCCTCTGGTATTGGTCGTAGTTGTCAGCAGTGGGTGGGCTGTCCT
GGTCCTCCTGGACGCTCAGGGAAGTGGAGTCCATGCCCACGTCTGAAGCCACGAAGATGT
CAGTTGTGATCCCGACTTGAGACGTGCTTTTTTCATTGGCAATCATCATTTTCCCCTTTT
CATATTTGGGAGAGTGTTTCCCAGTTAATAAACGTTCGGGGGAGATTGTTAGCGAATGAC
TTCCTGCATTCATGTGGGACACATTTGAAAGTAGCAGTTTGGGATTGGCATTTCTGCCAC
TGTTAGAAGATGATTCTTTCTTTTGGTGTACTTCTGAACTCGTCCGTAGCTGAGTTAATG
CTTTTTCTCCTCAGGGCAGC
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