SelenoDB
Release 2.0
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Promoter Report for SPR00001807_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesOchotona princeps (Pika)
Promoter IDSPR00001807
Promoter release2.0
External IDNone
Transcript SPT00001742_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001807_2.0 # Promoter # Selenocysteine synthase (SecS) # Pika (Ochotona princeps) Full length # Reverse
GCCCAAAACAAAAAGTCACATGTAAAACAAATCAAATAAATGCATATCTACTTGCTAGAT
TCAAGACACAATCTGATTGGTATGAAGAGTGTGCTGTACATCACCTCATCCATGTGCTCC
AGGATCAATTATCTCATTTCTCACAACTATCAGAAACCACATGGCTCAGGTCAAGGCCAG
GGACAGGACAGCCCAGCCCTACCCTGCCCTGGGGCTCTTACACGTCCATCCTCTTCTCCA
AGCCTCAGAGCTACTCAGCTACCTCCTCCCTACACAGAGTAACAGATCCCTCCACATCTG
TTCCCTCACAAGGATGGAGAGCAGGCCTCTGCAAGAACTTCCTCCTGTAACTAGGTAACA
CTAACGCCCCAGGTGATAGGACCAACCACCATTCCCACCCACCAAAAGTCACTCCCCCAC
TCCATGCACAACACCAGCCACATGTTTCAACTTTTGCACCTGCTTTCCTTGCTGGGCCCT
GCATCTTTCCCTGAGCCAGTGCTACCACCCTAATGAAACAGCAACCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCTATTCTGATTCCTGCATCTTACTTACTATAGT
CTGAGTTCATCTCATTTATCTCCTTCAATGCAACACTGCTTTACAGCTACCTACTAAGAT
GCAAAGTTTTCTTGGAGGCAGGGATTCTGCCTTCTTTACTGCTGTTTCCTCAACACCCCA
AAAATGTAGCAGACATCAGTACACATGACACTCCAGAAGTATACAGCTAAGGAAAAGATG
GACATTCTGACTCCACACGGGGTCCCACAGTAGTTTCTTCAGGTCCAAAACTGACCAATT
TCTCTTTTGTTTTGCCTTTAAAAAAAAAAAAAAAGCAGAAAGACAGGGAGAGAATGAGAG
AGGGAGAGATCACCCATCTGCTGGATTACTCCTCAAATGACTGCAAGAGCTGGAACAGGG
ATCAGGTAAAGCTAGGAACCCCTAACTCAACTAGTCTTCCACATGGGTGGCTCCTGTGTC
GCCACCTGTTGCCTCCCAGGGTCTGTATTAGAAGGAAGATGGAACTGAGAGCTCCTTACA
TGGGGTACAGGGCTTCTAGGCACCTTCTTGAGTCAGTATATGTAACGCCTGTCCCAAAAT
CCATCTTTCGTTGGATAAACATTACAAGAAAATTGCCCCCAGGTTTCTAAATGACTAATG
AATCTACAAACATTTTTTACTCGTCAATAAAACATATTTTGTATTCTGTGCAACAAAATT
TTAAACCAATAATTATCACTAAATAAACTTTCTATACTCAAAAAGTTAACAATCAAAAAT
GTCACACTTAATGAAGCTATCAGTAAGCATTACAGTTACATGTGATAAACCTTTCTCTTC
TGTTATTACAAGCATTTAAAGCATTCTGTTAAAAAACAAAGAGGCAAAAATGTTCTAATT
CACAGTAATCACGGGGGGGAGGGGTCATAAGTAGGGAGGCCGTAAGTAGGGAGGTGGATT
GGAAGTGGAGCAGTTGGAACACAAACCCTTACCCATACAGGATGCAGGTGCTTGGCCTTG
GAGGATTAGCTGATTGAACCAACATGCCAGCCCCTCCCTGGCTTCTTAAATTAACATTCC
AATATAACTTTAGAACTTGAAACAAAAAGATAATCAAATGGAAGCAATAAACTCACTCTT
CAGTACCACACCAAAGCTGGCAGTGTATAATGGCTAAATAACTAGTTTAGTAATTTCAAC
TCCATATTTTTTAATAAGCAATCATATATTTTCACTCACATGGTAAAAGCTGATTTTTCT
TCATCTATATTACTCATCAAAGCCTTAACCAGTTTTTGCATGTCTGAGTCTCCCTTCTCA
AATTTACCAACCTTTGACATCAGGAATAAATCTGACAGTTCAGGCAAACTGGAAGTCTTA
TACATATCGCTTTATTTTTGCCCAGACAAGCACCACCACAAAACTTAATCCCTTGGCCTT
CTTTTAACCTTAATCATCTATTAATGAAGCAAAGTGTTTTTCAATGTATGTATTTCATTG
ATGAAGAACCATTTAAAATATGATTCTGTCCAATGTGGCCACCATATTAAACACCAATGA
GGTCACATTTTGTAGATACAAGGATCTCATCACTACTTAATTTGTACTAAACTAGTGAGC
TATTTTTGAAGAAAAAAAAAAAGGAGATAGAGGGAGATGTTTCATGTACTTCCTAGAGTG
CATTGACTTACTGATGCATACATGGTTATTAACAAAATTAATTTTCCCAATGTTCAATTT
CTAATACTTTACTAAATCAGTTTTAACCAGTTCTATCAATCATTTGCTAATGCCACTAGA
ATTCAGTTTTAACTTCATTTAACATTAGAAATCTTTAGACCATAACTAAACATCATATAT
CATAGTATGGGAGTAATTAAAGAAAAATATTGTAGAATCAAGGTCACATGTAACAGCAGA
TATTTACAATATCCCTTCTTTGAGTAAATGGTCATGAGAGGTAAAGCAATAAGCAAAGCT
TTTAAGTATGGTAAGATATAATATACTAAATTCTCAAACAGTCCATGTAATAAGTCCTAA
ATGCTCTTCTGGTAACATCAATGTATTTAAAAAATATCTTTCAGGAGATTATACCAATAT
CCTACACTAATACTTGGCTAAGCAGTTTTTCACCTGATATATTAAAGGCACTACAGCACC
TGCACTATTTTTTGCTACAGTTAAATCTATAACTGACATTTATTACAAAATACTTCTGTA
AAGAAACAAATTTATAAGTAAGCCAAGCAAATGTATATAGAAAGATCTTACTTAAAAGAA
ATGAAATATTATTGATTTTCTATGTACTCTGTGCTGTATTTAACTTAATTTTAAAGGGCT
TTTCACTAGAGATAAACTGAACTGTATACCCTGAATGCTAATGTCAGCTATATTTCTAAA
ATAAAAATACAAAACTTTACACCATAGTTCAAGATGTTAACGGAAAGGAAGTTGAAGTAC
ACTGAGCATTTTCTTTTGTCTTGCCTCTGGCAAGTTGATTTGCGGTCATGAAATCCAACA
TCTAGCCTATTTCTCCACAGAACCACAGTCCATGAAGAGCCACACACAATGAGACAAAAA
CACTGCCTTTAGCTGCAGGGACCTGCATTCAGACCTAGAATCTAGTGACTGTCATGGAGA
CTCAATCTCTCCTTTTAGGGCCTACAAATCTAAGACTGTGGTCTCAGTGTGATGGCTTAA
TGGTTAAATCCTTCATACTGCAAACACTGCAATCCCAGTTAGGTGCCAGTTCGTGCCTAG
GCTGTTCTACTTTCCATCCAGCTCCCTATTTATGGCCTGGGAGAAAGCAGCAAAGGATGG
CCAAAAGCCCTGGGCTCTTGTACCCACGCAGGAGACTAGAGGAAGCTCCTGGCTTCAGCT
GTTGTGGCCACTTGGAGTGTGAACCAGTGGATGGAAGATTTTTCTGTCTCTCCTTCTCTC
CGTAAAATCTGATCTTTCTAATAAAAACAAATAAATCTCAAAAACAAAAACAAATCTAAA
ACTGTGCTCCACCTTCTCTCTGTTATAGAGCTGTGAAGTTGCTTTTGATATTCTTTCAGA
ACTTAGCTTATTCTCCAAACTTCAGCTCACAAATTCTACTCATGGAGCAGCTGTTAAGCT
GCCACTCCTCTCCTACACTTCGCCAATTCCACGGATATTTGCAACAATAGATGATTACCT
GCTCGCCCTGTTCAGCACAGTACTCCTCCAACAAGAAAGCTAACCACAAGACTGGTCTTC
TTGGGCAGCAAAACTGAGGTAAAGATAAACTTCTAAGACTGATCATTTTTTATGCATAGA
GAACCTCAAACAGCCTCCTACATTTTAACCCTTTTTCTTGGAGGGCTCTTCCAATAAATA
CATGGTCTTTTCTCCTCTCAGTGAAGTGAACGTGTTGATCAGTCAGGGGCGAAGGGCCAA
GAGGCTCAATTCACACACAGAGTTCCACTCCCTCTGATCCTTTCACCCTTCAGAAAGGAA
GGTTAGAGAAGGAACGGCTTCAAGCTGAGTTCCTGTCTGGCACCACTGTGAGAAAGATAA
AGCCTTTGCTGGAGAGATAGAGCCAGATGAAATAACCTCTAAAAATATCATGCTGGGGAA
TAAGGGCACTGAGGGTTTTTTTTAATCCAAAGTTTTCTTTTAACATTCCTTTTTTAGTGC
ACAGTAACACCAGTAACATAAAAAGGAGCTTTCAGTGATGGTATATAAATAGCTCTGGTT
GGAGCAAAATAGCTATGCCTCAGCTCCTTCAGAGCTGAACCAATAAACTATCACGATTAC
ATTTTCACAGTTCAAAAGCAAGTCCATTTAAACAAAAGAGGCCCTTACTTCTGCAACAAA
TCCAATAAAGAACAATATTTATGCTACATATATGCAATTATGGTTTACAGAGGCCATCCT
CGTTTTTCAAATGAAAGACCTGCCCATTCAATGAAGCCGTTAAATAGCACACTATTCACT
TACAGTGTCAGAGTTCTCAAATGAGCGTTTCAAAATTTCATATATTCTCTGTTCTAAAAT
TCTACACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCC
AGCAGGTGTCTAACACATAGCAATCGTTCATAAAAATCCTGGTTTCTGGGCCCAGCATAG
TAGCCTAGAGGCTAAAGGCCTCGCTTTGCATGCACTGGGATCCGACATGGACACCAGTCT
GTGTCGCAGCAGCCCCACTT
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