SelenoDB
Release 2.0
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Promoter Report for SPR00001831_2.0
Identity
PromoterSelenoprotein N (SelN)
SpeciesOchotona princeps (Pika)
Promoter IDSPR00001831
Promoter release2.0
External IDNone
Transcript SPT00001766_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001831_2.0 # Promoter # Selenoprotein N (SelN) # Pika (Ochotona princeps) Full length # Forward
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NNNNNNNNNNAGGCACTCAGCCCAAGTTTCCTACATGGGGGCAGGAACCCAGCAACTTGA
GCCAGCACTTGCTGAGTTCCAGGGTGCAAATTAACAGGAAATCAAAATCAGAAGCAGATC
TGGAGACTCAAAACCAGCAATGTCCATGCGGGATTCAGCCTTCACAAGCACCCACCCTTT
GGATTTTTTTCCCTGTGGTAAGGAACGTACCATGATGGTCAGATACTAAGATACACTGAC
TGATTTCCAAACACTGCTGCTTTAGAAAGCAAACTACGATGACAACCAGGATCCCTCAGC
AGTCCGCAGAAACAGAAGAACAGTAAACTTCCTTCGGGACTAGGGAGAGGAGCTTTCTCT
GGTCCTTGCCTGCTACCAACTTTGGGTCCCCACCCTCTCTCGTAATGACCATCACGATCA
CTCCAGAAACCCCTCCAAACAAACAAACAAACAAACAAACAAATAAACAAACTAGGATAG
ACAGAGAACAACAAGGAAAGCTTAGAAACAGACAGGAAACGGTCAGCGGGGATGCACTTA
TAACTCACTGGGTGGGACACAAAGATTAGTTACTCCTCACTGGGGTATTGAAGATTTCTC
TGCACACCCCCCAAAAAAACGTTCACCTAAACTGTTGACATATGTCCTGTTAGAGTTATA
GAGTTAGACTACCAGAAAAACAGCCAGGTTCAGCAAAATCATGCTTCAATGCTATAAAAT
GCTAAATACTAACATTAAAATAGACAAGAGACAGCTGAATAGCAATCTATAGCCATTTTA
AGGTATATAGAACATGGTTGAATATAAACCAAAATTGAAATGTCTATGAGGAAGTCACAG
GTTGTAGTTGAGAACCTGCATTTCTCTTCCTGCTTCTTGGACACAGTAAGCTCAGCCAGT
TCGTTCCCACTTCAGGGCGTTACACCCTGCTGCCCTGCCCCCTTCTCCTTGCCTGGAGGC
TCTGTGCTCCTTGCATTCAGCTTGCAGCTCCCAGCCAAGGTTACCCACCTGCTGTGCCAC
TCCTCACACCGTGGCCGCCTGCCCAGTGACCGCCCAGCATCATGACCCAGAATGACCCTG
TTGATCGTCTCCCTCCTCCTGGTAGGAATTTCAGAGCTTCCAGACCCTGTCTGCCCCCAG
GGGAGCCCAAGGGAATCGCTTTGTGGACTTCCTGGAGGTGGCGGTAGTGAGCAGCGCCGC
CATTTGAACACGTGGGTAGAACCAAGTGCTGTGTGCTTAGGGGGACCACCCGCCTCCCTA
GCCCCCTAGAAGCACCTGCCCGGTGCCCATTGCAGAGTGAGGCTGCATTTCTCCCTGTCC
TGCTGTCTGTCTGCAGCACCCACTGCAGGAGGAAGATCCCCTGCCATGTGTGTTTACCGC
AAGGAGACTTGAGTTAGAAGACACAATTCTACTGGCAGGCAGGTACCTGTGTGTGAGAGA
GACAGAGATGGAGGAACACAGAGGGAGAGAGGGAGGAAGAGAGGGAGAGAGAATAAGGAG
AAGCAGGACTGGCAGGGCCACCCCCTGTTCTCGTGGGAAGGTGGAGTGGCCTGGAGTGTG
GGTCAGTTTGCACCCCTGGCTATGATGAGGCCGGGGTAGACATCCAAGGCGCGGGTCTCC
AGGCAGGAGCAGAGTCGGGGAGGAGAGGACAGCAAGCCAAGCCCTGGGTAGTCAAGTGTC
CCTCTCTTGGGATGCAACCCGGGTCTTCACAGGCTGCCCGGAGGCCCAGCCTGGCTTTCC
CGCCTCCTCATCTCCTGTCACACAGCTTTGGGGACTCCCTGTTCAAAGCTACTGAATTGT
GGATGCACAGCCAAGCTTCCAGCCACCAGACTTTCATCCCTGCTGTTCCCGCTGCAGCGA
GCTCGCCCTTGGGTGCTGTGACTGACAGCTCCTGAACTCAGGGCTGCCATGCCCCGGGTC
TGTGGCACCTCTCTGTGCTGGGGAGGGGACACAGAAGCCACTGACATCCTCGGGGGAGGG
GACACGCCCATGCCTCCCCTGACCAAGCCCCGATCCTAGCACAGACTCAGCTGCCCCTCA
GTGAATGGAAGGACGGGTGGGTAATGTCCTGCTGACCTGTGAGCTCCTGCAGCACACGGA
GACCCCACCAATAACCTTGCAGTGTTCACTGACTGCTAGCTTCCAGATGCCACCCTGGCC
CACTGCAGGGCCAGAAGCCAGCTGCTGGAGGCACCCCACAGGGCCTGTTCTTGCCAGATG
AGCCATCCCAGCTCAGGTCCCCAAGATCCTGCCCTGCCCTCAGGTCAGCCCTCCTGGGAA
GGGTGCCCACCAGGCCAGCTCCATCTCCAGAGCTGATGTCTCCTGAGGGTCAGCCCCCAG
GGCCACCCTGCTCCCCAAAGCTCATTGGCCTGAGCCAATCTTCACAAACATACCATCTGT
GTGAGGCATGGGCCCCTGGTCCCCGGTAGCTTTTTCTTTCTTTTCTTTTCTAATTAAGGC
ATGGGGAGGCACAGAGGTCTTCCAGGCACTTTGCTTTACTCCCCAAATGGCCACAATGTC
CAGGACGGGGTCAGGTTAAAGCCACAAACCATCAGTTCTATTCAGGTTTCCCACATTGGT
GCATCTTCCTAACTGCATTAGCAGGGAGCAACCGGGGCTTGAATTGGCACGCATATGGGA
TGCCAGCATCTCAGGTGGCAGCTTAGCTTGCTGTACCATAATACTGACCACGAATCCATG
TGTTTAACCCGAAAGCTGCAATAACAGCCAAGAGCTGCCTGGCCTGGAGAATGCCCCTCC
CTTGTTTCCCAGGGGCCCAAGCTCATCCATCTTCCCTCCCCACCTGTTCCATGTTCCATT
AGTTGTGCCTCCTGATAGGACGGAGTCAGATCTTTCTAACAACAGCTGCCATAAGCCACA
TGTCCCCAAACATCAGCAATGATGAGCCAGAAGTGGCACTGTCCGAAGCCCTGGGGAGCC
GCACCAGTGGCAGGTCCTCTGAGAATGCCGCGGAGACCATGGGGCCAGAGCAGAGGCTGG
CGTTGCCCACGACCAAAAGGCCTTTGCGACTTACTCATCCAACAGACACTTTAGAGGGCT
CCCCATGTGCCATGCCCTGCACTGCACCGGGAGCACACACTGTGGGCACTAAGGACACGC
ATGATAGCAAGAGAGTGGGTTGAGACAGACCCGGGTGCCAGATCTCAGGGCGGCTCCACC
TGTACGGCAGGTAGATAAACCGGACTGAGGGGCCGGTGCACCCACGCTGGGGCTGGTGGT
GTCCTCACGGCTCTCCGATGGCCTCTGAGTCCTCCTGTGGGAGCCACGCAGCTGCCCACC
ACCTGCCAGGGCCCTCATCCACCAGCATTGGCATCGTAGGGCTGCCTGCAAACATGCCCA
GACTACTCTCTGGAGTGGGCACCCCTGCGATTCTTTGGATCATCCTGGTAATGGAAGAAC
TTGGACCCTGGGAGCACCACCCCCTGCGCCAGAACCAGAGCANNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNTGGTGCGAGGGGCAGTCAGATAAAGGAAAGCAGGAAGCTGGCCC
AGGAGGTGCCTTTCCTCCCG
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