SelenoDB
Release 2.0
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Promoter Report for SPR00002027_2.0
Identity
PromoterMethionine sulfoxide reductase A (MsrA)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002027
Promoter release2.0
External IDNone
Transcript SPT00001962_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002027_2.0 # Promoter # Methionine sulfoxide reductase A (MsrA) # Medaka (Oryzias latipes) Full length # Forward
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGTTACAGCATCGGTGGCGGTCGTTG
TTAACCCGGGCCTCGACCGATCCGGTATGTCTAAAGTGTTGTGGATGATTCGCATGGTTA
TTTTGGCAATTTTTACGCCGGATGCCCTTCCTGACGCAACCCTCTCTATTTATCCGGGCT
TGGGACCGGCACAGAAGTTACTGACTTGCAACCCCTGTGGCTAGATTATTGCATTGTTAG
CTAATTTGGTTAAATATTTCAACTGAGAAAGTGAGAAGATAAAGGTGTGATTCATGGTGT
GAACATGTTTATCTGCTTTTCCTTTGTCCTAAACACATTTTTAGGGAAAGATTAAAGAAA
AAACTAACCTGTGACTATCTGAATAAACATGTATTTCATAGAATTAGAGTTATCATGAAG
GAATGAACACATCATAGTCTGCAGTTTTAGCATTTAATTTCCGGCGACAACCTTTCTATA
TATATAATAGGGCTTCTACCTCAATGTGTTAAAAGCCACACTTTCCTTTAAATATGACTT
TATTCTCATAACATAATTTAAAGTTTTGTTAGTTACTGTTAATTTATTTTTGGGATTTAC
TTTTAAAGAGGTTTGAAATTTTATCACTAAAGGGGTCCAAAAAGTGTTTATGTGTTACAT
AAACTAAAATGCAGAAGATAAACTTTGAAACATGAAGCTTGCAGATTCTTTGGATGCTAA
ACAGGTAGCTGTATCAGACAATAACCATTATGTACAATTTTTGATAACCAGTTGGACTTC
TTGGATAGTTTAAGGCACATGTGTCAAACTCAAGGCCCGGGGGCCAAATGTGGCCCTCCA
TGTCATTTTATGTGGCCTGCGAGAGCATAAAAGAGTTTATTTTCTTAGAATAAAAAATAA
AAATTGGTGTATATTTATTCATATTTAGGGGGAATCAGACTTGAAATATCGGATTGGGCA
ACTATACATTAGGACTTAAACACTGTCCATATTACCTAACCTGACAGAATCAAATTTAAA
AGGATTTATGCTAAAGTAACAAGCAAACATATGTTTTCTACGCAACTGTAATTGTCACTT
TAAAAAGTTATAGTAAATAAATAATGAATTATTTAACATTAAGGAGTAGTTACATTTATT
TTTAATTAATTTAATTTAGTAACAATAATACAATGTACAGTAATACATTTAGATTCCACA
AAAAATAATTTTTAGACATTTTAAATTTTCTAAAAATGATATTATTTAGGATAAATATGA
CTACGGTAATTTATTAAATAGAAGACTTTGCAACATAGCAGATGTCAGAGGGGGCTTAAT
GGCTGTAATGTGTATGGACCCTATGATCGCAAAGCAAACCCAAATCATTACAAATCCACT
TCTGTGCAGCTATTAAAAAAGATAAGATCCTTCAGATTTTTCTAATTGCATTCATTTGTA
TTGTCACCAACCTTAACTAACTAAAGCTTTTAAAGTTTCGTTTTGTATTATATTTTTTTT
TCTTAGTGACTTTTTTTTGCATTGGTATAACTGGTTTTGTTCAAGCTTAAAAACTCCCCT
TAAAAGTTTTATTTGGGAATATTGTTCAAAATCATGAACTCTGCATTATCCGGAAATGGT
TTTCCAGATTTGTAGGAACGTATTTGCTGGGGAATTTCCCATTTGCATTGAGTCAAAATG
TCTGGATGTACCACACTAGCAAAAGTAAAATAAAAAAATAAAAAAATCCCATTCTTTAAT
TCAGCAGGAGATATAGTTGGATTGTTTCATCTGCCTTCGTAACATGGTTCAAATTTTGTC
AAATAAACAACAAAATGTTAAATTTGGTTTGTTTCTCTGATTATCTCAGATATGAATTGA
AAGAGGCTCCAAATCACTTGCAATGCTGTCAACATCTAGAAAGTATATGTGTTGAATCAC
TAGCTAATGGCATTAGATTGAATACTTTTGGAAACCCTGTTTAGGACTATTTTCAATTGT
TCCACATTTGTGAGGAACATGCATTTGTGAGAGTTTGTAAAAATAAAATATTTGCCAAAT
CTTCTCCACTAACACCAAATAGTTTATTCCGTTACATACTCCAGCTTTGTGTTTGTGGAT
TGAAGTTTAAAGAAACTGGACCAAATAAATGTATTCATTAATAAAACAGGAGACTGAGTA
GAATAGAAGAACCAAACACAAACCCAGCAGTTTGGTACCTCCTCCATAGGTGGTGTGCTG
TTGACTACATAAGTTTAATGGGGTTGAGGTCAGGGCTGGTGGCTGCTCATACCAGTTTCT
GTTCAACCCCCTGAACATATATAGTCTAGTTTCCACTGAGAGAATTGGTCTGGTCCGGTC
CAGTTTAGAATGGTCCAGGCAAATAAAGTGAGTGTTGCCACTCAAAGCTGGACCGTTACA
CCACATGCAGGGTGAAGCTAACAATAATAACAATGGAGGTCATCCAGCAGATTATTTTTT
CTGCTTAGCCTTTGGTACTTCATATATACAAACCATTTAATGTTTAAGAGAAGATTGAGG
GAAGAGGAAAACAGCCACTTTTTTGGAGCGTTCTTTCGTCAATGACTCTCAGCCAAAGAT
TAGGTTTTAACAGTAGCTCCGCCCTAACCTTTTCTGTGGACCTTCAACCAATGAGGAGGG
TGTAAGTTTAGTCAGTTTGTTAGTAAAATTTAGTATTTTCCTGTTGAATTCTATGTATTT
ATGATCCTTTTGATTTTATGTTTTACTTTTTCAATAGTACCGATACAAAGCCCATCGAGA
CGACTGTTTTTGTGAATTTGGGCTATACAAATAAAATTGAATTGAATGAGGGCCCAAAAA
TGGTTCCATTTGGTTCGGCTAAATGGATCCATTTTATAACGGAAACGCTCAAAATACAAG
ACTGGTCTGAACCGGGCAGTTCCATACCGGTCAGTGGAAACAAGGCAAATAAAAGTGGAC
TGAGTGAGTGTGACGTCCCCTGTAGAAAACGGTTTATAACAAAAAATAAGTCTATTCAGT
CGCCATTATTTTTCACAATACAGACACTGCCATGAGGGAGCCAGACAACGTCAGTAAGTG
GCGATTGGTCCAACTAAATATTTCTATAGCAACCACTCTCACCAATCAGGAGTGAGCTTG
TTCGAAGTCCACCTTCCCTCCACTTGAAAACGGTCTCTGGAGAATCTGTCAATCAAATGT
TTTTACCAAATACTTTTATTGAGGCATCTGAAAGCTCAGTTTATAACTTGAATAATTTAG
ACTGAAGTGAAAAAAATTAGGATTAGCAAGAACATGTACAAAAAAATAGGTAGCAGAGCA
AGGATGGATATTTTGACAATTATAATGACAAAGTAAAGGCTGTTTATTTCTCATCCAGGG
GTGACTACTTTGTTTTTTTCCCCCTAGTGACCGAGGGGCTGCCCCACACCATCATACTGC
CTCCACCAAACAATGTTACTCCATAGTTGTAACAATCCCCATTAAGTTCTAACCATTTAT
AAGACAAATAGATTATTATCATAGAACATTTTTGTCAAGAAGGAAAATATATTTTAACCA
AATACAAAATGTTTACTTTTTCTGCAAAAATGTCTTTGAAGTCCCACTCCGATCATATTT
TGATCTATTTTAAAAGCTTTCCCAGTGGTCTTTTCATTAAAATTATGCCGTTTTTAGCCA
AAATTATAAAACCTTTGTTGTCTTGTAGGACATAGTTTCTGCAGAACAGCAGCAGTTCAT
TAAAAATGCACCTCTAAATTGTGAGCAGGACCGCTGGGGCAGTGGAACCGTGCTCACACT
TTCCATCATCCATTTGTCTAGACTCTTTCCTGCTAGCTCACAGCTCCTCACAACCCCAAC
CTAGGATTACCGGTGCAACAAAAATAGCGAACAATACTGGAGCCATCCAGACGTCCAGTT
TAGAGTCAGATATCAGCTAAGACGTGGAAAACGAAGACCTACATGGATCTATTTGTCTGC
CAGTGGATGCAGCAGAACAAAGTAGAACAAATTGTAGCTTCTACGTCACTGCTACAAGCT
TTTTCCAACTGCATTTTTCTTTACCTGCTCCTGATTCACCACAATTACAAAAAAAGAGAA
AGAAATACTCAAACACAATTTTTAGCTTAATTTTCTTTACATATACATGTCCTCCATAAT
GGCCAAAACACACATTTCATTATAGTGGGTATTTAATGCAACAGAGAAATAGTCCCTGTG
GATCCATGAAGGGGGTCCAAAGCAGCCAAAAATACGCATTCCTTGATGACAAACAATAAA
TAAACAAATAAATAAATAAAAGGCGCCTCAACCACTCCCACCTGACTACGATCTGCTCCC
AATAAAGGCGCCCTCCCTTAGAATTAGATAATTGACGACTGCTCATTTGCATGCTGGATG
CGGTTAGAAATTTATTTAAATTTAATTTCCTTTCCGCGCAAGGTGCTCTGCAGGCTGTTG
TGCCAAAGTCATATTAACCCCACGACTAGTTATTATGCAGTGCACGACGTTGCCCACGCG
CGATGAATATTCATAACAATGGCGGGGTTTTTTTTGTGTGTGTGTGCCGTGACTCCTCCC
TCCCCGTCCACGTCGCGCGACGTAACAGAACCCGGAAACGCCGTTCCTACTATACGTTTG
TGTTGTTTATTCGAGCACAA
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