SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00002048_2.0
Identity
PromoterMethionine-R-sufoxide reductase 1 (SelR1)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002048
Promoter release2.0
External IDNone
Transcript SPT00001983_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002048_2.0 # Promoter # Methionine-R-sufoxide reductase 1 (SelR1) # Medaka (Oryzias latipes) Full length # Reverse
TTGCTTCAACGGGTCTTCGGTGTTAATCTGCCTTCAATCCACGACAGAACAAAACATCCG
GCCGGCAAAACACTACTTCCTGTTTGTTTGGCATGCCTTCAAAATAAAGGTTGTGGCGTT
ACTTGTGCGTTTCACAGGGTGACTTCTGTTTGGTCAATAAAGTTTTATCGAATGCAATAC
GCTTCCATGGTAAAACACGCCAGCCTTACAAACAAGAAAAGTTTCAATTGAAACTCTATT
ATTAATTAGAACGAAATAGTTCATTTCATCCTTCCATGTATATATGTTCCATATTTTGTC
TTTTTTATATTAAGATCTTTTTTTCATTTACTAATGCCTTCATTTTGTATTATTACGAAA
AAAATAATACGAAAAAAAAAAGGAAACTGGGAACCAGTTTCCTTTTTTTTTCCTTTTATT
TATAATATAAATCTAAAGTCTTCTTTCTTATTTGAAAGATTAGGTCTTCATGTTTTGATT
GGACGTTTAATTTTAAAGAACCTTTGGATCTGAAATTGAAGTTATGCTTAATCGTGAGCA
ACCACAGAAGAACAAACAGCACCTCAGCCCCGTATTTATTTATTTATTAGAAAAAAAGAA
AGAAAAAGAAGGAAATGCCCGTTTCCGCTTTTCCAGCAGGGGGCGGTGGGTAGCACCTAG
TACGCTACTTTCCCGGTGAGCAAATATAGCCTACCAATTCATCCAGTAATCCCTATAGCA
TTTGAAAGTAAACCAGCTTCCTCAAATGCAATCTGGAGCCAGTATTTTGGATATAAAGTG
ATTTTTTAATTTAAAATTATTATTACCATTACTTCCATTAATCAAACGTGATCACGATGA
GAACTGTTAGATTATTGTGGGATCAAATAATCATTAAATTAATTTGGCATCAGCTAAATT
ATAACAATTACATTTCATATGAAATATGAAATATCTTTTTTTAAGTCAACATTTTTTAAA
GGGCATAGTTTTCCTCTGACAGGAGTTCCTGCAGGACGTGTAATTACATAAACCTGCACG
CATGCACTGCGGTGCTGGAGAGTTCATCCCAGTCGTCTGTTTTCATGCAGAGCGCAGTAC
CTCTCACACTGCTCTCCCTGCATGGTAACTGCTGGTGTCACTCGTATAATCTGGATTAAG
GTGTCATCCATCGGCGCGGTCGCTCAGTCATCTGATTTTAGACTGCAGCGAGCTGGGATG
GTGCTGCGTCCGGATGCTCGCTGAACTGCAGATGCTGCGTTTGGGAGTTTGATTGATAGG
AGGAGGAAGAAGCTCAGGAATGGCAGCAAAGTTGGGGGGATAATTGCTGCCAAAGGAGCA
AATGTGCCGCAGGACTTGGAAGATCTGCAGCATAGGGGCACACAGCAGCTCAAAACAGAC
TTCTGCATGAAAGCCTTCCTCGCTCCACCACTTCTCTTCTTCACCTGTAGGTAAGAACAT
TTTGAATAGTGTGAGCATTTTGAAAAATATTCTGTTCTGCTGGAACTGGAATTGAGAGGG
CAAAGAGAAATTATCTCAGTGACAGAAGTTGCAGCCAAATGTGTCAAACATCAGGGTCAA
ATATCACACTTACTGCAGGATTAAGCATAAGAAATAAACCTCCTGCCTGTTTTCTGATCC
CCCTCTTCATTATATCCCAATGGAACATTACTGAATTTCCTGAAATGTATTTTTTATCTC
CTGCAGGAAAAATAATTTTCTGTCTACTTTTAATCTTTCGGTCAAACTTAATCCAGGATA
GACAGATTTAGAGGGAGAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATAATCTTTTCTCTAATTAAATTTAGCTGAAT
TTGCCATATTTTGTGTGTCAGACCCATGTTCAGGCTGAGTCTGAGTCACGTCTGGTCCAA
GTTGTTTCCACTGCTTACAGGATTTAGGTCAATTAGGTTGCCCTTAACTTAAGTAGGTAA
AACTAGGTTTGAGTTCACAAACAATCAAGGATACCTGGGTACACTTAAGGTAATTTTCCT
TTGCCAGGTTTTTGTTTTTCATGTTAGTGAGGAAGCTGCTTTTCTAAATTTATTCGACAT
GTCTTTGCATTTTCTTCACAGCCAGAAGTCCAAAGTATTGCAGGTGGGTGACCGACATCC
TGAAGTCAACAATTTGCATCTTTTTTGCATCTATTTGCATCTTTTCTTTGTTTTAGAGGC
GATTCTATAGATTTTTTTGGTCAAACTTTGCTCACAAAATACGTATAACCAAAACTTATA
ACTAGTATTTTTTGACACTAGAACAAGACACTAGTGATGATAAATAGTATCTGAATCGAT
GTTCTGGTACAACTTTTTTTATAGATCAGAGTGTAAATTAGGAAAGTGTTTCATACAATA
TTGAATAAATGAAGATATAAGTGATTGGCTTTTATTTTCCTGCATGGAGAACATTTAAAA
AAATGCAGGTGCATCATGGTCTTACTGTCAGTGCTGCTTGTTCCACTTTTTAACTTATTT
GAGCAAAACTGAATCCATAGCCTGAACTGGAATGCTGCCAAAACTCAGCCATCCCTGCAA
TCCACTCAGCAGCACAGACCTTCTCTTCTCTGTCAGCAAAACCGACTTGTGAAGAGAAAT
TGATCAGGGTAATCTAAGGTAGTCTGCAGCAGCTGACCTGCTGAAGGAGCAGCACTTTTT
CCTGACTGTTATTGACACACAGCCCTGCATGGGTGATGACACACAAATGAATGAATATTA
AACTTCAACAGCAAATATCTCCAATGGAAAAAATGTCTGGAAAAAAAAACAATTTATTTA
GTTGTTTTTGTGAAAATCGGCTTTTATGAAGGTTAATCAGGTTTATTGATATTTCTGTTT
ATTTTGTATGTCCCTTAATTTGGTGATCACAAGATAACTGTGTTACACAGTACATACACA
TCAACTCAAAGATGAATATTCATCATTATTTTCGTTTAATGGGAGGGTAATAATTAAAAA
AAAGTATGAGTGTACCCCTAGGAGGTGCCTGATGGAACTCCGTGTTTTTTCTGCACAGCA
GGTCAAGACACAGGAAATGACATAACTTTTTCTAGACATTTTTTCTTATTTTTTTCTATT
TTTTTTGCTCTGTGTGTTATTTTNNNNNNNNNNGTCCTGGATTAAAGGGTTTGAATAAAG
GGACTAAGGAGTGTAAAGGGCTTAAAATTGTGTTTTTTAAGTTTGAAGAGCTCACGAGTT
TTCCAGACACTGAAATTCTAAAACCTGTTACCCCAGCATGATTCCAAACATGATGAACCT
GTTTCGGAAAGATAGAAAAAAGGAATAATTCTCTGATTTTCTGCAGGAGGGTGAATATGA
GAAGATGACAATTTTGGACTTGTCTTGTTTAAAAACAGAACTGGATCTTTTAACAGATTG
AGCAAGACATTTCATTGTATTTTTTTAAGTGAACTTATCTGCAATGGTTTGAGGAATTAA
GTAAAACTCTTTCAATAGATTTTATACAATAACATTAATGTTTTTTCTCATTCCACACAT
GATTTTGCAGGGTCTAACAAGAATGCTACAAATCAAGAAGTTTACATTAACTAGTTGGTA
CCAAATTCTACTCAGCTGTTTGCACCATGGAGGAAAGTAAGCTCATCTTCAGCCTGGACC
GCAAACATGAAGGCCCTTCTGTGGCTTTTACAAAAGAAAAACCCCAAACCAGGGAGTGTC
AGTCGGACCACAGCCTTGAGATGGCTTTGGATCTGGGCCCAAGTGTTTACTCTAAGCCCC
TCTTTCCCCTTCACTCCCCATCATCTCCAGGATCTTTATCTGATCTGTCCATGATGTCAG
AGGATCTTCTCATGACTACCGGGCTGGTCAAGTCCTCTTCCACAGACCTGAATACAAGTG
AGAGCAGCACTCTAAGAGGCAAGCCGCTCCTCAGCTTGGTCAAGTCTTTCAGCACAGAAA
TCTCCCGCAGGACTGAGCCTGAGGTCAATCTCTCCATGTCTGACTCCAAGCTTCATTTGC
ATCCCCGGAAGACAAACCAGAAGATCCGCGACCATAGGCCAGAGGAAGCGGGAAGGGATC
AAAATGAAGATGGGTCATCACATCCTTCGGCAGACAACCTGTCTCCCACTGAACCACGAG
GAAGTTCACTGATCGCTGACTTGGAGGACACACGGAGGAAGTTCTCAGAAGCTATGCAGG
ATCCCCTCAGCATGCTAAATAAGATCATGGGGGACGAGAACTCTGGAAGTCCCAAGCAGG
GAAAAATGTCAGCTCCAGAGGACTCACCTCTTTCCCAAAGTTGCTGCAGGAGAAGCAGCA
TCAGTGACAATTCCGTCCTGAGATGCAGGAGGACAGACAGCGAGCACAAACTTATGTGTG
ACAATCCAGTCAGAAGACTT
Chart Advanced