SelenoDB
Release 2.0
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Promoter Report for SPR00002052_2.0
Identity
PromoterSelenoprotein T (SelT)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002052
Promoter release2.0
External IDNone
Transcript SPT00001987_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002052_2.0 # Promoter # Selenoprotein T (SelT) # Medaka (Oryzias latipes) Full length # Reverse
TGGGAAAAGACGCTCCGCCTTCAAATTTGGGGAAAAACCCCTCACCCGCCCCACCACCCT
TCCCTTGTGCCCATGGAAACCCAGTTTTTCAGGGAGAAACGCATCATGTGTTTTTGAGCT
GAAATTTCAATTTAAACATGAGAGGCGTTCAAGGAACCCTGAAAAATTCCACTTCAAGAA
TCAAGTAATGTTCACAACATGAGGTTCCTTTTAAACTAGTCCTCAGAATTAATCTACAAT
CAATGTGGTCGAATATTTTTTTTTCTTAATAAAAAATGTAAAATGTAAATCCACTCACCA
GTACCGGAACCTCAGCACGGGCCCGGTGTACGCGGAGGCCCTGGCGTGTTCTCCGGGTCC
CGTGTCCGGTAAGGGGCTTGGACCGTCGGCCGGCTGCTGCTTGGACCTCCCGACGTAAAC
ATCCCGCAGCGTGAGTGCGGTGAAGAGCAACAGAACCGCCAGCAGGCCCGAAGGCCCGAA
TTCCGACATGACTGCTTGAGGAAGGATCGGTCTGCGCAGTCTCAGATCACCCGGCGACGA
TCGCAGCTGCGCACCTTCACAATAAGACAATCAGAATGCACGGTAGAAATGACGGGGCGC
AACAAGGAAGGGTTCAACATCATATCATAACTCATACACGTAACGGCTCACCTGCTGACA
GATGCTCACGCGTGTACGTCTTTATGAGCATCTGTTGAGCGTACACACCGGCCCATGCAG
GAGTCAGAGCTTTTATTGTGAAGGTTGACTTGGAGATGTTCCGGGTGGTGTGTGTCGCTT
CATGATCTGCAGTTATCCGCTGGCTTTCCTGAGGTTTTGACATTTATCCTGAACGCGGAC
ACACGTTTTCGTCCTTTTAGTAATGATTGGTGTTGGAGACATCACNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGGTGGTACGGCAGCCTGTCGGACTCGGCGCCCGTCCACCTGTGCGAGGACCTGC
TGGTGAGCGTGCAGCAGCTGAGCGGGCTGCCGTGGTGGATGAGCATCATGGCGGCGACGC
TGACCGTCAGAACCGCCGTCACTCTGCCTCTGGCTGCGTACCAGCTGCTCATCGTCTGCA
AGGTGAGGCGGACCCCGCTGGACCCGGGGTCTGGTTCAGCAGACAGCGGCCTAAGACTTT
AAACTTAAACTTTACTGTTTAAAGTCCCACTGCGATCCTCCTTTAATCTCATTTAAAAGC
GTTCCCAGAGGCCTCTTACTGTTTTTCCACATTTGTTTACACACATTTTCTGAAAGTATG
CCTTCATATTTATCGGAACTCTACACACAAATAAATAAATAAAAAACACACACAATGGGC
AAAAATGGGCAATTTCCTGCGAAACGAAAATTTGCATTCAAAACAATGTTATTTCCTCTC
AAAAATGGAATTGTGTTTTTAAAAGAGACACACACGAACCATCATATGAATAGACATTTA
TAAGCACCAGCTGAACACTGATGTGATCAATGGAAAACACTCATTCTCCATTCATCATAA
CAACATTTCCACAGTCTTCTCTGTTCCTCAGCTGCTGAGGAGAGCTGAAGGTTTCCATGG
CGACACAGATTCAGTCGCTGCAGTGGGCTTCAGTCAGAAGTCTCCACATGACGTAAACAG
GTTTTGTGTTTTGGTTAAAAGCGATATATTCGTACCTAAAAAACCAGTTTGAAAATAGAT
CAAAACATAGTTAGAGTGGGACTTTAAAGATGCACAATTCAAGACCGTAGCAGATCGTTT
CCTCTGTCCCTGCAGACTGCATAAATGCACAGACACCTTTGCCCTGAGAAACCATGGTAA
CCATTGCAGGTGGAGGCGCTGCAGGCGGAGATCTCTGAGCTGGCTAAGAGGCTTCGCTAT
GAGGTGTTGGTGCGAGCCAAAGAGAGAGGCTGGACTGAAAAACAAAGCCGGTGAGGAAAA
AGAAGTTTTTATTCCATTAAATAAATGAATCCCCATCAGACATTACTGGCGCCTGGTTCT
AGGTAATTGTTCTAGGTTTTAGGCAACTGTAACAATAACTCCGCTTTAAAAGAGTCTGAA
AATGTTCCTTCTTTAGAAGTTCAGGTCCAGAAGGAACTGGAATTCTGAAACGTTCAAGGA
GGTTTTACATTTTCTACTGGTTCTAAAGAATCAATCAGTCTTTATTTATATAGCGCTTTA
AAATCTGCCAGACATCCAAAGTGCTGCACAAGTATAAATACACTAAAACCATAGGTGAAA
TTCAAAGAAGCACAGTAAAATGATAACAATAAAATCATCAATAAAGTAATGTAATGTAAA
AAGATGAGTTTTTAGCAGAGATTTAAAATCATTTAAGCATCTGGCAGATCTCACTGACAG
GGGAAGACGATTCCAGAGTTTAGGAGCAGCCACTGAAAGCGCTCAATCCCCCTTGGTCAC
AAGTCGAGTCCTTGGAACCACTAAGAGCATCTGGTCTACAGATCACAGAGCTCTACGAGA
ACGATGGCTCTGCAGGAGCTCAGAAAGATGAGGAGGTGCCAGACCCAGACCATGTAAACA
TTTGAAAACCAAGAGGAAGATTGTAAAATCAATTCTAAAAGAAGCAGGCAGCCAGTGCAG
AGAGCGCAGTATTGGTGTGACGTGATCACGCCGTCTAGTCCCCGTTAGAAGTCGGGCAGC
TGAATTCTGGACCAGCTGAAGACGGCGGAGGAGAGACTGGTCCATCCCGGAATAAAGGGA
GTTACAGTAGTCCAGTCTGGAAAAGATGAATGCATGAACAACCCTTTCCAGGGTGTCATG
GGGGAGATCAAGTGAGGAGCTTATCTTGAAGGACAGACGCTTCATGTCCTAAAAGCCTTT
AAAGTCATCTATTGATCTACTTTCAAAGCTTTCTCAGTGGTCTTTTAAATGTGAGTATTT
TTTTTACCATATCTGTGTCATCTGCTAGGACATAGTTTCTGGAGAGCGGCAGTATTTCAT
TACAAACTTTCCTCATAGTTGTGAGGGGGGACTGTTGTGCGGAGTAAGCCCGCCCCCATT
TTCCATCATCCATCTGTTTACATTCTCTACTGCTTGCTTACAGTCCGTAGAAATCATCAT
TTTTTTCATCTGCTCATTGATTCACAACAGTTTGAATACATAAACACTCAGAAATGCAAT
TTTGAGCTTAATTTTCTTTATATATGTCCTGCACCAGGAAAGGCCTCTAGAACATGCTAA
AAACACCATTTTCATCAGAGTGGGTCTTGAAAGATCCGTGAGATCATCTGAGTCTGGTCC
TGAAGAGTGTTCTGGATCTGCAGCAGTTCGGTTCTGGGAGAGTCTTTGTTCTGTGTTCAG
GTTCCAGTTTAAGAAGAATCTGCGCCGCATCGTCTCTCAGCTCTACATCAGGGACAACTG
TCATCCCTTCAAAGCCAGCCTGCTGGTCTGGGTTCAGTTGCCCCTCTGGATCAGTCTTTC
TCTGGCGCTCCGGAACCTGAGCTTGAATCAGTCGGGTGAGTTCAAGTCTGCCGGGTCAGG
CTGCCTCGTCCCGGAATGGACCCTCATAGTCGACCGATGTTGTGTGCAGCCCTGCAGGAG
GAGCTGGCAGCAGGGGGCGCTCTGTGGTTCTCTGACCTCACGGTACCGGACTCCACCTGG
ATCCTGCCCGTTTGTCTGGGTCTCACCAACCTGCTCATTGTGGAAGTGAGTCTGTGCGCT
CACGGCGATCCCCTGACCTGTAGTGATGTCACACTGAGCATGCTCCGTGTCTGCAGGTGT
TTTCCCTGCAGAGAGTGGGCGTGTCTGGCGTGCAGCGGCTGGTGCTGAATGGCATCAGAG
GGTTCTGTGTGCTGATGATCCCCATCGCCGCTGTGGTTCCCTCTGTGAGTCTCACACACA
CATGTGCTGTTGTTCAGGTGTGCATCCCTGCAGGTCTCTGGGGTTTCGAGCTGATTGGCT
CGACATCTGCAGACTCCCCAGACCTGATCCAGAACAGGCTGGACATTATCTTTGCAAATG
AAGATTGTTTCCTTTTTTTCTGTTTAGTTACTTTCTTGTCTGCTTTTACTTTGAAAGGTT
CCTTTATGTTCTGCTCTGACGCCTCTGTTTCTCCCTCCTCCCCCCAAGTCCATGGCTCTG
TACTGGTTTACCTCCAGCCT
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