SelenoDB
Release 2.0
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Promoter Report for SPR00002056_2.0
Identity
PromoterSelenoprotein U (SelU)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002056
Promoter release2.0
External IDNone
Transcript SPT00001991_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002056_2.0 # Promoter # Selenoprotein U (SelU) # Medaka (Oryzias latipes) Full length # Reverse
AAGCCATTCTGGATCTCTGCACGCGCTCCTTCACTGCATCCCAACTCCACACTCACACAA
ACTCAGGAGTGGAGACGCATTTAAATTCCAGCAGGGTTTTAGTCACCAGTTTGCTTTTCC
CTTCCCAAAGCCCAGCCCTCTTTCAGCCTGAAATGCTGATTAGACACCCAGATTACATGC
AGCTGCGCCTGATCTGCGCAGACATCTGACCTTTGAACTGCAGGGCAACAACAAAGCCAG
GAAATCTAGGAGGGTTAACTTTCATGGTCAAAGGTTGATGAAGATTCAGGAACTTTGCCA
GAATAAAATACATGGAAACAAATATTTATGGAGAAATAATAAATAAATATTTGTTTTCCT
CTACAAGCCTTCCCTTCATACTCATTTTTAAACTCAGATTTAGTATAGATGTAGCTTCTG
AACTTTGAGCTCAGTAACAGAGCAGTCTCATTGTGACACACAAGTAAAATGTGGAAACAA
GGCAGAGCGATGGGCAGTTTTGAAATATGCAGTCTAATAATAGCTACAGCTTTTTTTTCA
ATTTAAAATGACTTTATTAAAAGTTTTGAACACTTCTTGAACAAGCCATAAAAGACAATA
AAATTACAAAAATCAATATTTGTCCTTTCATGCTTATTGTGAAACAGTGAGGTGGCAATT
TTTTATACGATCTAAATAACAAAAACAATATTAACTCATTTTTAATTTACTCCAATAAAA
TAAAATATCAAAATGTTAAACAAAGATATCAGGAAAAAAATAGCACTTTTTATTTATTTA
TCTTGTGATCCGTCATTGCTGTCATATTCCGGCAGTCTTCTGATGACTTTCTGGTTCCTT
CCAATGACTTACTGGTCCAAAATTTCCATCATGCAGCCTCCTGCAATAAAGTGTCCAGTA
AATACCAGCAAACGTTTGCTCCTTTCTGTACTTTTTGAACACACATTTTGATGTACCAAA
TATTTGAGAAAAACAACAAATACTTACCTTTTCTAGACCGATAGGAGATGGACTTGCTTT
GATTTCTCTCATCTCTTCCTCCTTTTCTTCATGGTTGCGGTCAGTTATGTCTTCCTCTTT
TTTTTCATGGTGAATTGTCTCATCGGGTTGAGCATCTTCACTCTGGAGCACTGACGAGGA
CCGGATGACATCTTCAAGTTTCTCAGTTTCCACATCATCAGTCTAAGAAAAAGTAAAGAA
ATTACATTTAAAAAACACATTTTTTGAAGAGTTTTAGGACTTTTAGCTCAACATAAGAAC
TATTAAAAGCATTTGTTTTATTAAAGCAGACTGCAATGTATTTCAAACTTGTATTATACA
GCATTTTTTAAGAATCAATGTGCAGATCCTGCCTGTAACGCTGGAGTAGATTCCTTAATT
CTGTCTCTGCAGTGTGCGTGACTCATCTGGAGTCGATTTTATCAGCAGCCTCCCTCATGC
GCTGCCCATTTGCCTCCTGATGCTTAACTATTGAATAGTGCTGTCTGTCTCAGCGTCTGT
CTCTAGTGTCTGAGCTAATCTGTGGCTCCTCAGAGGGGGGTTAAAGTTTTAGGCCTTTAA
AGACCCACTCTGATGAAAACTGTGTTTTTAACATGTTGTTAAAAACAATGGCCTGATATT
CAAAAGATGTCATGATGGCGGACATAATATGAAAAGAAAGTTAAGCTCTAAATTGTATTT
TTAAGTACCTCTTTTTTCAAATTGTTGTTAATTGGGAGCAAACAAAAAAATGCAGTTTGA
AAAAGATCATATTTGTTATGTATCCAGGTACGTCGGCGTTTTCTTCGTCCAAGCTGGCAT
GTGGTTCAAAACTGTACATCTGAACAGCTCCGGTATTGCTCACCATTTCTGTTGCACCAG
TCATGTTAGGTGGGTGTGAGGGGCTGTAAGCTAACGGGAGAGGGTTTCAAAATACTGGTA
CCGGTAAGGGGGGAAGGGGTCAAACCACCCACGAATCAGAGGCATATTTCTGATGAACTA
CTACTGCTCTGTAGAAACTATGTCCCGGAAAACCACAGATTTTAGATTTTTGACTAAAAT
CTTCATAATTGATTGATACGGCACAATCATAGTCGCAGACGCGACGTTCACCTGAGCCCA
GCAAAGCTGTGAATTAACCTAGCTGGGAACGTTTCCTGCAAATGGTGAGATGGCCAGCTT
GAATTGTTCCTGTGACTAAACAAACCAGGCTATTGCAGTGCTAAAGAAAAAAAATAAAGA
AATATTTTGAAATCTTTCCACTGGGTCCCAGTCAGCTTTAGGATTGATTCTAAAGTTCTT
TTCATTTGTTTTTAAAAGTTTAAATGGAGTTGGCCCCTCATTTTTTTATTAGATTTACTT
TTAGTTTATGACCCTCCTAGATCCACAGGTGGAGGTGTGCTGGTGGTCCCAAAAGTCAGA
ACAAAAACCCACGACGAGGCCTGATTTCAGTACTGTGGGCCTTCCATGTGGAACGTCTCC
TCAGGCAGGTGAGGGCTTCATCCACTGTGGAGGTTTTTAAGAAAAAAATTAAAACTCATT
TTTTTAGTAAAGCCTTTATGTAGTTTTTACTTGTCAACATGTTTTCATTAGATTTTATAA
ATTTTATCAGCAATTGATGCGCTTCATTTTGATTGTACCTGTGGGATGTGTATGTTTTGG
GTCTGTATGTGTTTTAATGTTGTTAATTTTATTTTATCATTATTATTTTTACTATGTTTG
CTATTTTAACTACTGTTTTTTATCTTACAATTATCTATTTTATTATGGAAAGCACTTTGA
GAGGCTTTGTAGTCGAAAAAGTGGTGCACAAGTAAAGTTGAATTTGAATTACAAGACCAC
TGGGAATTCTGTGAAAATAGATCAAAAGATGGTTAGAGTAGGTCTTTAAAAATGTCAGCT
ATGCATTCAGGATGTTTAAAATCAAATACTTTTAAGTTAGCAATAGAAAGTGAGAAAGTA
CTTTCTCTGTGCCTTTTGATGCATTACTGATCTGCTCCTCTTCTGTGAGATTTTCCTGAT
GTGATGCTTCTTGGCTGCTTTTTTCCTGATCTTGATCCAGCAGAGCCAGACTTGCCTTCT
TCTGCAAATACAAAGGTGATACAGGAACAAATCTAAGCTTACAAGTCTAAAGTTTACAAG
TATACATCTTATATAAACCATAAAATGTTTAAACTTTCATTTTGTTTTAAGTAGGGCTCA
GCNNNNNNNNNNTACAGACAAAAAGAAATATTTGTGAAAAAACCTCATTGTCATTCATAC
ACACACCCATACACAGACGCACAAAATAGTATTTGTGAAACAGATTAAATATTTTGACGA
GAAAGTGATCATTTTGAGATGTGTTTTAAATTGCTTTCCAGTAGTTAAACTCAATAAAAC
AATATTAAAATTCTTTTGCATCTTTACAAGTTTTGCTTCAATGTGTTATGAAGCAGAAAG
AGACATCAGTCACAGAATGTCAGAAATTGGGGGAGGAATAATTCAAAAGACTATGTTAAA
AAAGGAATTCATAAAACTAATAGTTATCTTAATCTAAATGGTGCAGATGCTACTACATAG
TTATTTAATAAAAGCAGAAATAAAATTGTTGGAAGATTCTATATTCACACTCAAAGAAAA
ATGTGATTTGTGCATTTTTACGAAATTTTTACCACTAGGTGGCGCAGACCCTGTTAGTCT
TACTGACTGCATAATAGATATATTAAAACATAATGTCCTATTGTACAGTCAATGGCTTTA
TCTACTGTTATGATAAACTGTTCTGTCCTTAAAAAGTGGGCCATTTGGTAATATGTTTAA
GTAGAAAAATGGGAGAAATTGCCACTTATAATAACTGAGAAAGATACATGTCTAGAATGT
CTTATATATATTTTTCATCTTTTTCCCCTCCATATTACATTACAATTTCTTGCACTGGGA
TTTTTGCAATTGTTTGGATTTTTTTTTGGTTCTGTTATTTACAGAGTGGCAGTCTCATTA
TAAAAAAAAACCTTGTTTTAAACAAACTGTTAGAAACAGACCTCAGTTGGAAACTCCCTC
TTTATCCCTGTTTTATCGTTATATGACAGACAGGGCTGTGGGTGGTAGTTTGTCCCTCGT
GGTGTTCCATAGGTTAATATTCATGGCCAGCACCTGTCTGTTGAGCTGTGATTGGCTCAT
GAGGCTGATAAATAGCAGCTGTGAGTTCCACCTAGATGCTGGTTTGGCCTTGGTGGGTGA
GCTTGACATGTGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAT
TAAATTTTTTTTTCTTTTTAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCTGCTCAGTTGCACCTCTTCTGTTTTGTATTTTCTTTTAATCACT
GTTTGGGTTGTGGTGTGTTTGTGTGAATTTGGGCCCTGAGCAGGTACTCCTGGTGAGGGT
TTGGATTAGAGATCTCCCTTGGTGGTGGTCGTCGTGGCTACCCACCGGTGCAGTGGGGCC
GAGGCGATCCTGGAGGCAGCCTCCCTCATGCGGTGCTGGAGTGTGGTCCAACTGTCTTTA
TTTTAACCTTCTCTTTTATGGAACGTGTGTCAAGTTTTTAATTGTATATTTTTAACAACT
ATCAAACCCAGTCTCCCTTTGGGGGTGCAAATGTAAGAGGGCATTCGGTCACAGTCTGGA
GATTACTTATTATGTCTGTCAGTAAATGATCCAAAGTGGTCAAATTGAACATGTATTGTC
TTTACTCAATTATCTGTCAG
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