SelenoDB
Release 2.0
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Promoter Report for SPR00002223_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesPetromyzon marinus (Lamprey)
Promoter IDSPR00002223
Promoter release2.0
External IDNone
Transcript SPT00002158_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002223_2.0 # Promoter # Selenocysteine synthase (SecS) # Lamprey (Petromyzon marinus) Full length # Forward
GCCCCTGGTGCAGCCCGAATGAATAAACCCCCGTCACCCCCCTCATGGAACCCCCTGCGT
GACGACGCAACGCGAGGAGGGACGCGTCCTCCATCTGGAGGCGCTCCCATTCCGTAACAG
ATAACCCCAGCAAGGAGTCTCCTTCCCCCTGCTTGATAGGACCCGCAGACACGGTCCTTG
GTGGCGGCAGCAAGAATTGGAATATTTAAATTTGGGCTGTCATCCAGCGGCTTACAACGC
CCCAATCCCATGAGACAAGCGCAATCTGAGGCGGGTGGCAGGCGAGGCAGCGCGTCCGCA
TTAGTGTGTCGAACACCCTTCCAATATGTGGTTGTGAAATCATAGTCCTGAAGGACCTCG
AGCCATCGAGACAATTGCCCCGAAGGCTGTTCCACCCACAAGGCATATTGCAATGCCGCA
TGGTCTGTACGGATGGTAAAGTGCCGGCCGTACAGATATGGCCGATATTGCTGTATAAAA
AATACAATGGCTAACAGCTCCCGCCGGGTGACGCAGTATCTCTGCTCCGCCGGAGACAAG
ACCCTACTGCCGTAGGCCACAACGCGCTCCACACCACCGACAACCTGCGAGAGCACACCC
CCTATACCCGTATTGCTGGCGTCTGTATCGAGCAGGAAGGGTTCAGAAAAATCGGGGTAG
CTCAATGGTGGGGCCCTCACGAGAGCGTTGCGAAGGGAACGAAAGCGACCTCCTCGACCT
GACCCCAGTGAAATTTCACTCCCTTTGCTGTAAGGGCATGTAAAGGTTTAGCAATGGTCG
CGAAGTCCGCAACGAACCGCCGGTAATAAGATGCGAACCCAATGAAACTCCTGACCTCAG
CCACCGAGGTGGGGGTCGGCCAGGAGCTGAAAAACTTGAGTTTTTGCGGGATCGGTAGAT
ATGCCCGATCAGCTGACAATGTGCCCTAGATACCGCACGGATACTTGGAGCAAGTGGCAC
TTCTGTGGTTTGAATTTTAAATTTGCAGCACGCATTTTGAGGAACACGGCGCGCAATCTC
AAAAGGTGTTCGTCAAACGTTTTGCTAAATACAATTACATTGTCCAGATAGATCAGACAA
ATGTCCCATTGAAGTCCAGCCAAAACCAGTTCCATAAGGCGCTGAAATGTCGCCGGAGCG
GAGTGTAATCCCATAGGCAACCGGTTAAATTGAAATAGGCCATGTGGTGTACGGAATGCA
GTCTTTGGTCTGGACTCGTCATCCAATGGAAGTTGCCAGAACCCTGACAAGTCCAATGTA
GAGATAAATCGTGCCCCTGCTAGAGCATCCAGAGAGTCGTCCATTCGGGGGAGTAGAAAT
GCATCGGCCACCGAGATTTTATTTAGGCGACGAAAATCCACACAAAATCTCAAAGACCCA
TCGTGCTTTTTCACAAGCACTATGGGTGCCCCCCACGGACTGGTGGAAGGAGATATAATT
TCCGCAGCCAACATGTCGTCCACAGCCGTTTTAACATGATCCTTTTCGGCAGGACTCAAC
CGAAAAGGATTCTGACGTACCGGGGCATTTGCACCCGTGTTGATGTGGTGTCGCAGTAAA
TTAGTGCACCCAATATCATATTTGTGCTTGCTTAAGACATCAGCGAATTCACTCAAAAGG
TTCCGTAATCCGGCACGCTGGGAGTCGGATAGATCGTTCGTCCCTGCACACAGTGCATCC
ATCCAAATATCGTCCTCAATGGAACGTGGCCGAGTTGGAGGGTCGGTCCCCACATGTCCT
ATAACCGTTTCTTCTACGGGTACCGGCGTCGCATGTGCAAGCACGGTCCCCTGGGGAACC
ACAGCCGTCTGCGCCCGACATTAAGGACCATAATGAACGGGTCATCGCTCCCCTTCACAA
TCGTTTGAGCGGCCACCAAATCTAGCCCATTTTCCCTAGCCTTGGAGGGCCCTAACAGAA
CGCCATGGTCCGAAACACCCAGTGCGAAAGGTCGACGCAACCGAAGAGGTACGAGCATTT
GCGCACCCGGTGGCACCCGTACAGTACGAGTGACGAATGCCGGTATCGTCGCGTAGGCCG
TCCTTGCGGTGATGGGGGAGGGCGGGAACGTTATACGTCGGCCCGAAGGGAGCTCAATGC
ATCCCTGGTCAATCAATATTTTAATCGGCATTTTGGCCAAAAAGTCTGTCCCCAACAAGC
ACGGAACCGCCAGCGAGGATGAGACTAATATTGGCCCAGATAATTTGATATCCCCAATGC
AAATTTGTGCTCGGATTTGGCCGATGATACCCAACGAACCCCCGTTTGCTGCGTAACACG
GAACGTCGACTGGCAGCAAGGGGCGGCTCTGAACGGGGAGGATATTATAGATCAAATCCT
TGTCGATGCCCCCGTATCGACAAGGACACGCACATCAACTTCATCGATACGACCCGCAAC
AACGGACGAACAGGCCGACGCAGCAACAATTCGGTGAGCCAATTCAGACAACTGACCCGG
CCTGAGCGCCCTCTCGACCCCGCCGAAACCCGACGAACCGGTGGCCGTACCACGAGATCC
GTACATCGAAGCGCGTGAGGTAGTGACAGGTGTGTGCACAGGCCGAGCATGTGGGGTGCC
GCCACTTGCCGGAGTTTGATGCGAAGGCTTGAAGGCTGAAGCGCCGTCCGGCCGGGGTCC
TAGCGGTCGCTTCACCCGTATACACGCTGGGACACCCTCTAGGTTATCTAGCCTAACTCC
TGTGCTCTAAGTTCCTCCAGCTACAGGCGCTAGAGGAGGCAATCTGATCTGGCCCTGGTC
AAGCACAGATCACAGCACCCCACCAACCAGACCGGCCCTTAAAAGGGCTCCGGCTCTGAG
GCTCTGGGGCCGCACCACGGCCTTACCCTACCGGCCCTCAAAAGGACAGCGGTCAGGGAA
GTCCCAGGGTCTATCTAGCCGGTCTTCCTTCTTCACTGGTTCTTCATTCTTGGCCCCAAC
ACACTGCCCCGAGCTCTCTGGCTCCCCGCCCTTTATATCCATACACCACTGAGGGCGGGG
CTATAGCGGACGTGTTTGTAGCCCCCAAGGTGTGGCTGTGTGTTACCTTCCCACACTGTG
TTTCCTTCCCACAACACCCCTACATGTGTATTCCTTGAATGCATTAATTGAGTAAGCAAC
ACATTGTTTAATCAGTTAACTGGAGAATTGCTGGAGTGATTGGTGGAATGGTTGAATTGA
TATCACAAATCAATGCATCGTTGGGTAAATTAGGGGCCGTCCATAAATGACGTCACACAC
CTGGGGGGGGGGTGGGTCAGACATTTGTGACTTTGTGACGAGGGGGGGTTTGAGAAATGT
GACGTCACATCAAAATGTGCAACTTTAAATAAATATAGACAACACGTTTTTCTTAATTAA
ATCGACTTTTTAATACATGTTTTCTCCTACAACAGTGCAGCGGTACATTAAATACGCACT
ACAATGGCAATAGTTTAAAGCGATTTTCGACATTTTTTATTTGGGGGGGGGGGGCAGAGC
TTTGTGACGTCATATTTGAGGGGGGTCTGACTTTTTGTGACGCCGTGTGACAAGGGGGGG
GGGGGTCAAAAATCGTCCAAAATCGCGTGACGTCATTAATGGACGGCCCCTTAGTTGAAT
TGATAATTGTTGAATGTGAATGGTTAAATTTATGGCTCAGTTATTTGTTCAGTCAATCAT
TAAATTGACTAAACAATGCATGATTACATTCATGAACAATTAAATTAACTGAAATTGTAT
TGACTTCAATTACTGTTTTGGATCAGTGAATGGTTTAATCAATAAACAGTTGAATCAATG
ATTGGTTGACTCAACGGTTGAATGTATATTTGAATTGATGAAGGGCAAAGTAAACGGTTG
AATGAATGGTCATATTGATAAATATGTAATGAGCAACTTCCGCGACACGTCGTGTAGAGG
GAACTTCTTTTTTACTCACACTGGGCACAACACAGGCCAACACTTATTCTTTCTCACACG
GAGTACAACACTAGATATTAACGTCTCTACTGGCTACACAAAGCCGATCACTCGGCATGG
TCCCATCGCCCTCACGCCGCTAGCTGGCGGCGTGACAATGACGGCAGTGGAAAACACGCA
GGAGATCTTCCACGTGGCCGGACGGCGGAGAGAGATGTCGGCAAGCAGCGACGCAGCCAA
GACCCAAGACCCCACACACGAGCCCCGAGCCCCGGGTCTGCTCCCCCTTCTATCTCCCCA
GGCGTGGCTAGGTCCCCACTCCGGCCACGCCCTCTCGTGGAACCTTCGAGCAGGTTCCCG
GAGTATCTTGGCTAGCCCCACCTTATACCTTAGCCCCAGATACACCCCCCTCTCTGATTG
CTGTTACTTAACCGTGCCCGTACTCGTGATTCCCCTTCCAGGCCAGCAGGTGTCACCCTG
CCATTACAAATATTTGAATCAATGAATGGTTGAATCAGTGAATGGCTAGAATGACGAATA
GTTGAATTAATGCATGATTGAATTCATAAATAGTCACAGTAATGAATAGCTGAAACAATG
GATGAATTAATGAATATTCAGTGATACATAGTTGAATGAATAGGTGGATACGTGAACGGT
TGGATCAATATATATTCAAATGAAGTAATATTCAAATAAATGTTTGATTCATTGATTGAG
CAGTTTAACTGTACATTTTTAAACCCATGCAACCAGGGGCGGAGCCAGGATTTCAGGCCA
GGGTGACATTCAACAAATTTTTATTTCAAGAATGATTAGAGAGTCAGGCTGTTGAACTAG
ACGCCATCGGTTGGCGACACACTCTGACAATGCAGTTGCACAGAGTCCGCCACACCGAGT
GTCGTACACTTATATGCAGAATGTCACCCCTGTCACCCCCCTGGCTCCGCCCCTGCATGC
AACAGTTGAGAATCGGGTTGGCAGATCGTTTCGCGTGTTTCTCCCCAGGATGTTTGTTTG
AGCGGTTTACCTGTACTTCGTTAAACCCATGCACAGTTGAGAATCGTTTTCGCGGGCCGC
TCCGCGCGTGTCTCCCCAGG
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