SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00002235_2.0
Identity
PromoterSelenoprotein U3 (SelU3)
SpeciesPetromyzon marinus (Lamprey)
Promoter IDSPR00002235
Promoter release2.0
External IDNone
Transcript SPT00002170_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002235_2.0 # Promoter # Selenoprotein U3 (SelU3) # Lamprey (Petromyzon marinus) Full length # Forward
AGGGGCCGCACTATAGACCACCAGGGGCCGCACTATAGACCACCAGGGGCCGCACTATAG
ACCACCAAGGGCCGCACTATAGACCACCAGGGGCCGCACTATAGACCACCAGGGGCCGCA
CTATAGACCACCAGGGGCCGCACTATAGACTACCAGGGGCCGCACTATAGACCACCAGGG
GCCGCACTATAGACCACCAGGGGCCGCACTATAGACCACCAGGGGCCGCACTATAGACTA
CCAGGGGCCGTACTATAGACCACCAGGGGCCGCCAGTGGCTCACGGGAAGAAGACTGCTC
TACAGTATATGTACATTGACCCCAGGATGTGTTCACGCATCACAAGTGAGTAATTTGCAG
GTCATTTTTCGAATATGGCCACTTTGTACCGCGAGGGGGGCACACTACCCTATTAACTCT
TTTCGAATTACGCCACGGGATATTTAACGTCCACTGGGCAATGCCACCAGCCTAAGTGTG
AATGGTATATTTATAACACGAGGAGGCTCTGCTTGGGCTGGCTATCGCTAGCTTGTCTTT
TATTGCCACATTTGAACTGCCCCGTGAGTTTTCAAATCGCAAGACACGCACAGAACCAGC
ATCAGTCTCGCGCCGTCCCCATGCATTAGTCCATGGCCAGAGATAAAATCGGTACCACCT
AAGCTAGCAACACTTTTCAAGTACAGTACTGATTTATTTACACGGCTCATACGAGTGAAT
TATTTAATAGCCCACCTATTTGAAATGGTTATCACATAATTCACTGCTATTGGTCACATG
AGGGAATTGGAACCGCTAAAATTATGACCTTCAGGTGGTTACCGATAAGTGAACTATCTT
GTGTGGGCTCATCTGTCCTGTGGTGCATGGGTGAGCACACTACGCTGAGAGCCCGGCCAC
CAGAGTTCGATTCGAGGCCACGGCTAACATCAGTTATATTTAAACCAGTCCTGGCCTATC
CCCCCCCCCCCCTTCCTTCACAAACCCGCATTGAACAGTGTGGTAAAGTATGGTCAAACT
ACCCGCCCCTACGTCCGACAGCGTAGGGAGTCATCTTTCAGCAGTGCATGGACAGAGGGC
TGTGAATTGTAAGCGTTATATAACGTGTAGAGTACGCTGTAACGTATGCAGCCATAACAC
GTCTCACAACAACGGGAAGACTCTCGCAACAGCGAGGGAAATCAAAGAGATCACGGGCAC
TGAGCTGTCACCGCTGAGCATCTGGGTTCAATACCTGGTTTCACCCACACAAGTGTGGTG
CGTTTATGGTCTCAGCCGGATAGCCACTGACTTACACAAAACCACATAGACTCACATAAA
GCGATAGGTTTACACCGATTGGTTTGTGATTAAACCGGATTCTCCAGCGCAGTGAGTTGA
TGGGTCCCAGGCCGGTCACCAATGACTTGCACAGAGAGCCATATATATCATGGTGCGTGA
TTTACGAAATACTGCACACTTACAACATAAACTTCAGGTTTGCCCTTGATGTGGCTCTAA
AAGTCCAGCATACGTATAAACATGTGAATTTCAGGTGAATGTGAAACAAAAATCTAATCG
ATATTCCATCGTGACGCTGAGAGAATACGATGGCAATACATTTTGAGAGCGCATGGAACG
CGACTTCCTTCCGATATTCGGAAGCCACTGGAGCTTTGCAAATAATCTCGATTAACAAAC
TAATTTATTTTAAAAAACTTTTTTGTATTTAGTTCCTCGTCCTTCCTCCCGCACCTCCCA
TAAGCGTTGCGAAAGTTCAACATAAATACGAGACAATATAAACAAAAAACAGTACAATAA
CTTAAAATAATTAATAAATCAACCCGAGTTGTGTAACCGAGGTGACGTCACGCACGGCGC
TCCTATTGTTCACGAGGCGGCGCTCCCATTGTTCGGGAGCGGGTCACGTGCGGCGCGCAT
CACCCCGCGCGGCCCCGCCCCCCACGTGTTTCGCGTGGACTTTTAGCGCCGGTTTACATC
GCAGCAGCAGCCACAGAAGCAGCCACAGACCATAGCAGCAGCCGAGAGCATGACGGACGT
GAATCTCGAAACAGTTGGAGCGAATGAGCTGGTGAACGCGCGCACTGGGGAGGTAGGAGT
GAGTGTGTGTGTGGATGTTGTTTGTTGATGGTAGGTGTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGTGTGTATGTGAGATGATGAGTGTGGGTGGATGTTGCTACC
TTTGTGTGAGATGATATGTGTGGCGGTGGGTGTTGGGATGACTCGCTGCGCTACGCAGCC
GGGTGAGAAACTGCGTCCTTATTCCTGGCCGCCGCCGCTGCTAACACGGAGAGCCGTGCC
TGGGCCTCCGCTAGGCCGGGCTCCACACCAGATCCACTCCGTCGTAAATGAAGCACCGCA
CGGTGCTTTGCTGATGTTTACGTCCCGTGCATGGTGGAGACAAAGGCGGCAGGGCGTGGC
GTTGGATAACCTCCCCACTCCCCCCCCCCCATGTGCCGTTCCTGCCTTAATAGGTGCTCG
CTAACAGCCCCTGACAGTCTTATTAGACGGGCTATACAATGGTGTGTTTTATTATTATTA
GTGCTGTGTGGGGGGGAGCGGTGGTGTAGTGGTTAGCGCTGCGACCCGAGTTCGATTCCC
GTTCGCGGCCAACACCCGTGGCGACGATTACCTGAACCGGTTACCTGGGCGCCTCCCCTA
GGTAGACTCGGCCTCAAAATTAGTACCTGGGGGGGGGGGGCACAGTGCCGGCCTTCATAG
GTGCTGCTCGCTAACAGCACTTGCCCCTACATTGTGTCGAGGCTATCCGGTGGGGAGGGG
GTGAGATCTTTGTCTTTGTGCAGCAGCTGTGGCGTGGCCACACAAATGCGGAGCGCCCCA
AAGAGCCCCCAGGGGTGGGAGGCCGATTTATGACACAATAATTAATAATTATCGGTTCAA
GTGAAAATCCTAATAAACGAGACGATTAACGTTGTTTTTACGGAGCCCATCTCTCTCTCT
CTCTGCTCTACATCTCGGCTGTATAACGACGACGTTCTTCGTCTCCTTCGCCGCCTCTTG
TCTCATCAATTCTGTTATCCTCACGACGAGCTAACGACGAGTCGTTTGGTAGCGAGGTAG
GGGGCCCCCCGAATGACTTCCATGTCGTTGATTTGTGTAAATATTTACGTTGATTATTGT
CGTAATTGTGTGTGTTTTTATGGTGTGTGTGTGTGCTCTCCATCTGAGAACTACACCTGT
GAAACTACGTGTGATTGCGAATCCGTGTTCGTAGGGTTTGCTGGTGCATGTTGTTTATGT
GGTTTATTGTGAAAATTCGGTCACAGTTCCTGTGATCACTGTTACATTGCTTTTATGGCT
TTATTTTGGTGATTTCGAAAACGTTTTTTGGTTTGGCCATGTTTGTTTGCTGTAGTACGG
AGTTAGACTGATGGCCTTAATCTAAGTTGTCTTGTGGTTGTTGTTGTTGTTTGACTTGCA
TCCCACTGGGATTTTTTGCACACAGCGGTGGTGTACGGTGCTTTTTTCAGGAATATGTTG
CTGTTTTTTCCTGGACTTTCTGTTTTTCACAGTCACAAAATCACTTTAAGATGTTTTTCT
TGTTCATGTTTTTGTTTGTTGCGGTTGCACCCGATTCAAGAGCCGAATGGCTCACAGGGC
TATACCAAATAAATGAAAACTGAAGCTGTATGCTGTGCTGTGTGGTATAATGATAGTGCT
GGGGTGTGTTCGCCGACTTTGGAAATTGTTGTGTTGCTGTTCCTGTTCGTGCGAGGTGAC
CCTGTGTGTCGTTGTGTGGCGCGTGTAGATCTGTGCACCGGTGCGTTTGTGTGTGCACAG
AGGAAAAGGAATATTTACGGAAATGTTTGTTGCCCATAACTGGAGTCTTGAACTTTTTCA
GACCCATTCATCCCGTACAACCAACCCCACGTGTTTTTGTAAGCACCAGGACCAAATTAG
GCCTTCTACACCACCCTAGTACGGTTCATAATTGATTATTGTCCGGCTTCCAACCTTAAT
CCGGCGTTCCCGGGCCGATTCCGGTGCAACCAACAAAATCGCTCCAAAGGCTGCAACCAG
TCCGGCGATCGGCACCACGTGCGTGACAAATAAAAAGGAGCTATGCTTGCTTTCGGTGTT
AAATATATACAGTACATTATCCACTACATACAAATTAAGCCAATGAAAATGCTGCGCTTA
TATGCATCACCCCCATGCATAGTCTTCGAGATTGCAGTGGTAAGTACGGTAATCGGTAAA
TACAGTAACCTTTTAAAGTAGGAGATTTATTTGTCTTGTTATTTACGCCAATTTCAAATA
GTAAAATTTTAAACACTAAAAAAACGTACGCCTAAAAACAATGTCATACAAGAAAGTACA
TAAAAAGAGCTATTTTAACAAATCCAGCGCCCCCTCCCCCCGAAGCTGCCGGATAATCGA
TCTAGTGTATGTATCAATAACCACTGCAAGCATCTTAGCTGCACTAATCGGGTATTAGAG
AGGACGTTTCCTACCTGCCATCACTGTGGTCATAATCCTAGAGCTCTCGGGTCTCTGCCA
CCACAAGGTCTGCTTGTTTCTGTGGCCTCTTGATCACCGTAAAAAACATTTGCGCAAATG
TGACCAACTGATAGAGCAGCAGTGGTCTAGAGATATCCACCAAAGGTTCCCCAGAGTGTT
TAAACCCAATAATAATTGAGAGCATAGGAGTTAACATTCATGAGTTTGCCTTCGTGGAGC
TGCTCTGAGCCATTATCATTTCCCACGAAATGTGCAACATTGGGCCAACGTTGGCGGAAC
GGTTGGCCTGGTTGCCCCAAAGTTCCATGTTTACCGAGTTGACACCTCACGACGCCGAGG
TGATGATGCTGCTGTTGCTGAGCGGTGAGTGACAGCTGGAGCCACACACACACGCCTTGT
GCTCTCCTCGTGCGCGTATG
Chart Advanced