SelenoDB
Release 2.0
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Promoter Report for SPR00002242_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesPetromyzon marinus (Lamprey)
Promoter IDSPR00002242
Promoter release2.0
External IDNone
Transcript SPT00002177_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002242_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Lamprey (Petromyzon marinus) Full length # Forward
GCAATGCAGCAAAAACAACAAAACAGTCCAAGACCAATTTAAAGCTTTCGTGACTGCAAG
GATTCATCTTCTTTGGTTCTTTCGGTAAAGTCACTTCCTCGAGACAGTCTCGTCCCTTCA
CCTGATGAAAGCCACTTGTGTTGTGGCCGAAACGTCGTGAGAATTTTGTGTTATTTAATT
TTATTAATTTATTATTTTATTCTCATTCTACGTGACTTTACCGAAAGAACCAAAGAAGAT
GAGTCCAAGACCACTCGAAGACAACACCACACAGCAGTAGTCCCTCAGTACAATGTTACA
TTAACATTGAACTATCTATACACAGGTAAGGATCAAAGCTACAAATCACATTTGCAAATG
TAACTCTATCCAGCACTAATCTTCTGCTTCAGGATATTTTTTAAAGGAAGATTTACGATG
TTAAGGGACGAAACAAGGTTGCAGAGGTTCTTTGTGCAACCCCACCAGGTGGCGCTGGTT
ACACTGGTCTACAGCCAAAATGCTTCCTAAATAAATGTAGTCCAACTTTACTAATTCTGG
GTCACTGAGAATGAAAATGATGCTTAAAATTGTTGATTGTCTCAAGTTTTAAAGATATAT
ACGACCCTTGACTTGGGAATGGCAGAGGATAAGTGAGTTATAAAAAGAAGGGATATCAAT
TTAAACCAGAAATGACTAAAGTACATTTTTGACTGGATCTGTGAATAAATCTATTACTGG
GTTTGGATAGCACTTGCTTTTTGAGCAAAACAATGAATGATGCAATCTGAACCTGGTATT
GCGTTATACATGATATGAATTGCATCATGTTATTCCTAGAAGTCATGGATGATGCAATCA
TAACTAGGCTTTTCCCTCTGCTGAACAAATTGCCCTATATCAGCTCTAGAAATCATACAG
TGTCGTGCTCTCTTATTTGTCAGCGTTTGATTTTGCAAAGGGATGCATTTCTGTTTAGCC
AAAGTGAGCAGAGATGCCTCGTACTTGTGTGAACAAAGTAGATAACTTCTGCTATGTTTG
TGGTGAAGTGACTTTTGCTTCTCAAAAGCGCAGTATAACCACTATGGTTAAGAAAGCCTA
TCACCTTATTTTTGGCTTCAAAATTGGAGATCAGGACAAGATGTGGGCCCCACACATATG
CTGCAACACTTGCGAAACAAATCTTTGCCAGTGCTTGAACAGGAAAAGGAAATATATGCA
TTTTGCAGTGCCAACGATTTAGAAAGAGTCAACAGATCATATCAGCAATTGTTACTTCTG
TATGGCGCCTCCAGTTGAGAACGGTGTGTCAAAGAAGAAAAAGTGGACTGTACCTTATCC
AAACATTCCATCAGCTACACGCCCGGTACCCCATGGAGAAGGACTGCCGGTTCCTGATGC
ACCAGAATCACTCACTTGAGTCAGATGAGGAAGAGGATGAAACTTCTGGTCCTGAACCAT
CAAGGTCACATGTCCCAGATTTTCTCCCATTCTCCTCCTCTGAACCATACCTCATAACAC
AAGGTGAACTGAAAGACCTTGTCAGGAATTTGGAACTACCCAAGAGTAAGGCAGAGCTGT
TGGTCTCCAGACTGCAGCAGTGGAATCTCCTGGCAGGTGATGTTAGGGTTTCCATGTTCT
GTGACCGCCAAAAGGAACTTGTCCCATTCTTTTTCATAGAAGGTGATCTTGTAGCCTGCA
ACAACATCGATGGTGTGATGGCAGCCCTCAACATCGTTCATGATCCAGATGATTGGAGAC
TGTTTATTGATTCATAGAAGATGAGTCTTAAAGCTGTTTTGTTGCATAATGGCAATGTTT
TGCCATCAATTCCAGTTGGTCATGCAGACCATATGAAGGAAACCTTTGACAACATGAAAC
AACTTTTGAGGTGCATAAATTATGACCAACATCAGTGGCAGCTTTGTGGCGATTTTAAGG
TGCGTGCTTGCCCCAACACTGTTTGGAATATTTTTCTCACTTATGCTCACACATGCCTTT
GGGCCAGCAGAAGAGGGAGTCTTTCTTCATACAAGATCTGATGGCAAACTCTTCAACCTT
GGCCGTCTCAGATCCAAAACCAAAGTCTGCAAAGTCCTCATTAGAGAACTCCTTTTTGCT
AATGATGCTGCGCTGACAGCTCACACAGATCAAGGTTTGCAGACACTCATCGACCACCTT
GCCAATGCCTGCAACAACTTTGGCCTGACAATCAGTCTAAAAAAGACCATGGGCCAGGAT
GTCAGAGACACCCCTTCTATAAACATTGGCAGCTACACCCTGGAAGTCGTTCAGGACTTC
ACCTACTTGGGTTCTACCATCACCTACAATTTGTCCCTTGTCACAGAGATTGACAAGCGC
ATTGGGAAGGCGTCTACAGCTATGTTCAGGTTGACTAAAAGTGTGGGAGAACAAATCCCT
AACGCTCAACACCAAAGTACAAGTGTATCGGGCCTGCGTCCTTAACACCCTCCACTATGG
GTCTGAGTCCTGGACAACATACGCCCATCAAGAACATCGACTAAACACATTCCACCTCCG
ATGTTTCAGGCGCATCCTCGATATCAGATGGCAAGATCGCATTCCCAACACCTCAGTTCT
CAACTTGGCCAACATTTCCAGCATGTACTCTCTACTCAGTCATAGGCGCCTGAGATGGCT
TGGACACGTGCGCCGCATGCAGGATGGCAGAATACCCAAGGATGTCTTGTACGGCGAGCT
GGCATCAGGCACACGGGTCACTGGTCGCCCAGTCCTGCGCTTCAAAGATGTCTGTAAACG
GGACACGAAGAGCTGTGACATCAACCCAAATGACTGGGAGAAAACTGCCGGCGACTGACT
CAGCTGGCAGCAGGCTGTGAAAACAGGCCTCAGGAGAGGTGAGGAGAAAAGACACACTGC
TTGGCAGACCAAGAGGTAGCAACATAAAGAAAAAGCAACAAACACCTCTGGAGCTTCTTC
TTTGGTTCTTTCGGTAAAGTCACGTAGAATGAGAATAAAATACTAAATTGATAAAATAAA
ATAACACAATAATATTCTCACGAAGTTTCGGCCACAACACAAGCGGCCTTCATCAGGTGA
AGGGACGAGACTGTCTGGTAGGACAGCGCTGGAGTGAAAAAAGCCACGTTCAGATCACGA
CCTTTAAGCTGTGTCAGAAGAAACAAAGCGCCTTGACAAAGGAATTAGCATATAATTTAG
CATTGAAATGGCCGAGTGATTAGCTTGTGACTGGTCACAGAAATGGCTATGTTAAAGTTA
AAGCATACACATCCGCAGAGGCACCCCTTGACAAAGGAATTAGCATAGAATTTAGCATTG
AAATAGCTAAGTTAAAGCATACACATCCGCAGAGGCACCCCTTGACAAAGGAATTAGCAT
ATAATTTAGCATTGAAATAGCTGAGTGATTAGCTTGTAACTGGTCACAGAAATAGCTATG
TTTAAAGACAGAGCATACACATTCACCGAGGCACCTAGTACAAATCAAACAGGAGAATTT
AGCATTGAAATAACTAGGCGAATTTAGCATTGAAATAACTGAGTGATTGGCTAGTGACTG
GTCACAGAAATGGCTATGTTGAAGTCAAGGTCTACACATCTGAGCTATTCACAGTAACTG
GGTATACAATACAATGTATAATGAATACTATATAGTGAACCAATAAAAAACTAAAATATA
AATTACCTTAATGTTATCAATAAACTCTATATTCTCCAATCAGCTAAGCTACCAACAATA
AGTCGTTATATATCACAATGCTATATGGCAAGGATTGTCACTCAAGGATTGGCCTACTAA
GTCATTCTAGGCGCTGCAAAACCTATAGCTGACATCGTAAGGTGCAAAAAGAATTGTCTC
TCGAGACACAGGCCTATGAATAGTTTTTTTTGTCTTTTGTTTCATAATACATTTTATTTT
TATAACCTTTTGCTGATTTTTTAAGTGTTAAATGAACAGTACAGGTGACATGTTATCATG
TAAAGCAACAAACGTAAATATCTTGGGAACAGTAGCCAATCAGTTGTTTAATTGCCATAT
TTGAATGAAGCACATCAAAATCCATAACAAACAGAAGATTTCATCTCTAAAGCATACGAC
GTCTAAAAAATTGTAGACCAGTGTTTATCACTGCGGGTGTTTAACTGTAAAATAATTTGC
GCTGTCTCCTTCACAGTGGATTTTAAAGATCACGTGACGTCATTTTGAAAAGAATAGGCC
ATTGTAGTCCAAATACAATAAAAACATAACCTGAATTGACGTGTCCAAATATGATCGTAT
CGCAAGACTGTACATGCAGATCGTCTCTTTTCAAGCTCATGGCAATATGTTCAGTAGCTA
AATGCCAATGTCAAGGTCTGCTAGCCACGACAGGGCTTCAGGAGCGAGTGCGTGTAGTTT
TTATATTCTTCTTTTGAAGGAGGTCAGAGTACAGTGTTTCACTATATGGTCCATAGTCCG
AGTTGCATCGGTGGGAGATGGTAGCCCCATCTCACGGTGGCGCCACTTGTTAAATATTTT
CGTGTCACCTTAAACAGAAATATTACCATAGTCTAGGCGAAATGGAGATCATTCATTTGA
ATCCAAATACCATCAGTAGAGTTGAATGTGCCTTGTCGGGCCTTGGAAGGGAGGTGAATG
AGTGTGTAGCTGCTGTGAATTAGATTTCTCTGTCTGAGGGGTGTGTGTGTGTATGTGCGT
TGTGTTCACCAGTTGCGGAGGGGTAGTGCAATGGTTAGCGTGCTGCGCTATGAACTCGGC
GATTTGGATTTGATTCCTGCTCACGGTTAACACCAGTGACGATTATCTGAACTGGTCCTG
GGCCTCCCCTAGGTCAACTCAGCCTTAAATAAGTACCTGGTGCGGTGTGTAGTCATCGCG
ACTAGGGAGACAAAGGCGGCCGGGCATGGTGCTGGCCACCCACCCTCTCATCTACCGTGC
AGCCTTCATAGGTGCTCGCTATTAGCACTTTCCCCAACAGTATCTTAAGGCTATACGGGG
GATCTTTGTCTTTGTTCACC
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