SelenoDB
Release 2.0
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Promoter Report for SPR00002539_2.0
Identity
PromoterMethionine sulfoxide reductase A (MsrA)
SpeciesSus scrofa (Pig)
Promoter IDSPR00002539
Promoter release2.0
External IDNone
Transcript SPT00002474_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002539_2.0 # Promoter # Methionine sulfoxide reductase A (MsrA) # Pig (Sus scrofa) Full length # Forward
CTGGCAACAGATGTCCCTGTCACAGACCCCCTCCTGTCTCTGTTTCATGCTCTGTTGGTA
ATCAATAGTTAGTGCCCAATCAATGAGTGATTTTTCTGTTTAGTTAGTTTGCTTGCTTCT
GTGATGAAATGTGCCACCAATTTTGGAAAAAAAAAATTATAAATACTGGTTAAGTTCCCA
GGTTAGCCCTCCACTCCCACAAGTTGTCTTTGATCTATAGGATATGTTTAAAGGATCTGT
GGTTCTTTGGTCCCCAAGTACTTGCCTCAGCAGTTTCAATGGGAAAATGCCCTCCGTTTA
TAGGACTAAAAGTGCCATCACTTGGTTTTTAACAACTCCCTGTTCTCTCCTTAGAGAGAA
CACACAGATATCCCTCCATTCTTTTATCCATAAAGCTATATAGAGTTTTGGAGATTTTCA
AAGGGCCTTTTTAAAAAATTGCAATGTATCATGTAGAAACAAAAAGGAAAACGGCTTCTT
TCTTTGTACCATCTTTCTCTTTATTCGCTTAGACCAGGAATGGCAGAACAGTTTCATCAC
ATAGGCCTGCCCTAAGAAATAAGAGATTTTATGGGATACTAAGACAAGAAAAGATTTTGT
GGTCATATTCAGGGATCGTGAAAATATGCTGTGATTGATGAATGATGTCTGCCATGGACG
CAGAAGTGGAGGATAGGTAAATATGTGCCATGTATTTGCCATTCTTGACTCCAATCGTAT
GAAAAACAAAGTTCACATATAGATGATAATACTAGCCTGTCAGCTAAGTGTTATGTACTG
TGTGCCAGACACTCCTCTAAATGCTTTACATATGTTAACTCATTTAATTCTCAAAGCCAC
CTATAATGAGGAAACTTACAATAAGGAAACACTTCAGACAGGGAAACTTAGGCACAAAGT
TTCTATTCATAAGCCAAGGTTGTACAGATAGGGAGTGGGGGAGCTGAGATTCAGGGTCAG
GCAGTTTTGTCCCAGAGCCCCTGTCCTTAGATGTGTATGCTGTGCTATTTCTCACTGGCT
AATGCTGTGTCTTTACTGTCCAGGGACTGATGTAAGGCTCAGCTGTGGTTCAGAAGAAAA
TTCAGAATCAAGTTTACAGACTTTGTTGTCTCTGGGCCTTGGGCTCTAGAATAGAAGATA
AGACAGAATCCCGGGGAACCTTAGCAGTAAGGAGAGAATTACATGTAAACTTCCTCCTTC
CTCTCCAGATAGAGTTTCAGTCTTTCCACCTCTGCCTTCCCAGTTGAAGGTAGGGGAATG
GGAAGAGAAAAGGGATGACATTTAGGGACTGGAACAGAAGAGTTCCTTGGTCTCCAGGCC
ACCTGGCTGGGGAGACTTCTTCTGAGTGGCCATTTTCAATGATCATTTTTATGTAAGTGA
TACATGTACATATGAAAAAGAGAGAAATGTTTAGTATACCATGTGATAGATCTTTCATAA
AGCCTAAAGAGAAACTTTTTAGTGGTTTGTTTTCCTTCATTAATTTAACAGTTATTTATT
GAGCACCTATGCTGGGTCCTGCAATGTGTTAGAACTATGGAAATGGTGAACCAAAATGGC
TATGAGCCTTGCCTTCCCTGAGCTTGTAGTCTACTCATTGCGATAATGACTAAGTGTAAG
ATGCAGCTCTGACTGTAGTAGAGGGAATGAAGTACCAAGGTGGCCTGACCGTGTGTGTTT
TTGAAGACTGCATTAAAGAGTTTTGACTTTAGCCTAAGAACAGTGGAAAGTCATGGAAAG
TGGGGGAGAGGGTGGGGACTTTGTCACATAATCCGAGTTAAAGGATAATTGTGATGACAC
TGGGAAGAATGAATAGGAGAGAGGATATAGAAGAGCTAGAGGTCTTCTTTGTAGGAGTCC
AGGCAGAGAGGCTGCAAGAATTGGGACTAGGGTGGCTTGGGTGGTGATGGGAGGAAGAAG
GAGGATTCTAAAGATGTCTGGAAGGCAAAATTAGCCAGATATGGTGACAGATTAGATGGA
GGTAGTGAGAGAAAGAATAGGCAAGGATGCCTAGAAAGTAGGAGGAGGGAGCTCCTGTCA
CGGCTCAATGGAAATGAACCCAACAAGTATCCATGAGGACTCAGGTTCAATCCCTGGCCT
TGCTCAGTGAGGATCCAGCATTGCCATGAGCTGTGGTATAGGTCACAGACCCAACTTGGA
TCCTGTGTGGCTGTGGCTGTAGCTCTGATTCAACCCCTAGGCTGGGAACTTCCATATGCC
ATGAGTGTAGCCCCGAAAATTGAAAGAAAAAAAAAAGAAAGAAAGAAAAAGGAAAGAAAG
AAAGTAGGAGGGAGGTGGTCCTATTCTCTGAGTTAGGGGTACCAGGAGAGGGGGTCAAGT
TTGGAGTGGAAGGTCATCCTGAATGGGAAGTGCTTTTGGGCTTCTCCAGAGGAGACATCA
GATAAACCACAGTCTTCATGGTAAATGCATAGTGTTTTGGCTGGGCTGTCTATAAGCCTT
GATGGACTTTCTTGGGAAACTAAGTACTGCAGAAAAACAATTTAGAAATCTATAATTTTG
TTGACTTTTAAAAATCCAAACAAGCATATTTTCATCTAGAAAAGAATCTGACAATGACAA
AGAAAATTGATAGAGATAAATATCTTGCATAATCTCCCTAGCTGTTTTTCCTTTTGCATA
TTTCTCTGCCAGTCTTTTCCCATAAGCATTCATATTTTAGTTAGTTGTCATTACAGTCTC
CATCCAGCATGTGATAGGATTGTTTTCACTTACTGTTATCCCAAATATTTTTTGCTTTTC
TAGTAGCTCTCAAATTCTATATTTAAAATGTTGCATGATATTCCATGCTTGTGATAAATC
ACAAATTATACTTTTCTAAGCTCTTTCTCTGGTTTTGGATTTTTAGTTCATTTAAAGATT
TTATTATTAGAATTTTATTATTACTTTAATAAATATTGTAATATCTACCACCTCATCTTT
TTCTCTTGCATTTTTCCTTAGGTTAAATTCTTATGAGTGACATTAGTGGGTTAGTGTTTG
AATGGGATTATAGCTCTTGATATGTGTAAAGGCAGATGTTTTAAAACCTCTGTCAGGGGC
TCTGGAGTCCTAACCATAGAACAGAACTGTGACCTCCATAGATTCAGCAACCATGGCCCT
AAGCATGTGTGAATGCTGTCCAAGGTCCTGAGGCCACCTATGACCTTTCCTCCTGCATCT
GCTGTTGGAGCCAGATGGTGCCTGGAGGCTGTAAGGCTCGTTCTTTGGTTCAGCCTGGCT
CCTCCCCTTCTCCCAGATTTTCTTTTCTTCAGATAGTGATGCAGTTACTTAGGAACCAAC
GGAAGCTGCTAAACCAATGGTATCCCGAAAGGATTGTCTTAAACTAGACTGAGCCTTGTA
AGCCTTCAGATTCTAAGAGACTTGCTATGGTGCTGCAGAGGCTGCCTAGGGTTTGGATGG
GGTTCTCAAGACTTTCCATGACCTGATCCCTGCCTATGAATCCATCCTTAAGTGCCATTG
CTTCTCAACATGTCACCTCTACTGAACCCAGACTAGACTCTGCTCTGGCCCAGGGCAATG
CCTTGGTTGCACCTACTCCCGGCTCTCACTCAAGTGGCTCCCTTACCTTCTGCCTTTCCT
TTTAGACTCAATGCTGCTTGCAGATCCCTGGCTATGCCTTGAAGCTGGCTATCCCTCTGC
AGCACACTCTTTTGATACCTTTTGTCCCCACTCCAAGATTTAGCACACAAATTGGAAGCT
TTCTGGTGAAGTTTGCTTTTGAAATCCTTACCTCTTGAAGATAACTGTACATTCCTCAAG
GGCAAGAACCATGTCATCCTTTCCCCTAAATCCCCCAGAGCCTAGCTTTGGTGTTGGGTG
GGCTCTGTGCCAAAGCTCAATAAATATAATGTGAATCATTAGCTCAAAATATATGTGCAC
CATGATGCAGTATCAAAGTGTTTTAGCCATTTCTTTCATGTATTTTCAACATAAATATCC
CTATTCCAAAACTGCTGAGGATATTAGACTATGCATAGATGGACCATACCCAGATCTTCT
CTAACAGGTTGCAGTTTAGAGGTTATGAGAATATGTTAATGCTGGAAACCCATAAGCTTG
TCACTTTTTTTTTTTTTGTCTTTTTGCTATTTCTTGGGCCATTCCTGTAGTGTATGGAGG
TTCCCAGGCTAGGGGTCTAATCGGAGCTGTAGCCACCGGCCTACACCAGAGCCACAGCAA
CGCGGGATCCAAGCCACGTCTGCGACGTGCACCACAGCTCACAGCAACGCCGGATCGTTA
ACCCACTGAGCAAGGGCAGGGACCGAACCCACAACCTCAAGGTTCCTAGTTGGATTCGTT
AACCACTGCGCCATGACGGCAACTCCCATCACTTTTTATTTCTGAGTCTTTGATATGCAC
TGGGGAGAGGTGGGGGGAGGGATGATTGGTGGAGGGAACTAGGGTGAAGAGTAGGAAGAA
GCACTGGAATGAATGTCTGTCAGGTCCTTAAGACGGCAAGTGTCTCTGGCTCCTGGAATG
GTGCTTGGCTTGTAGTGAAGTGATGTCTTCTGCTATTCTGATTCTTGAAAAATTGCTCTA
CTGTTGTCTTTATATGCAGTGTATTTCTGATCATCAGGAGCCTTCACTGGAAGCCACCCC
AGTTCACCCTGGAAGCTCAAGTTCCCCTTGTTCTCTAGGCCTGGCCTTGTGAGGAAGGGA
CCCTCTGGCTGGGGGTTGGGAGCTTCCAGCCTGGCTGGCTCTGCCACCCCCAGCTGCACG
ACTACACACACTTGAGGCCTGGGTGCATTCACTTGTAAAATGACATGCCTGAGCTAGACC
ATCTCTAGGATCTTTTATAACTCGTTTAAAAACAAAATTGTTGCAACTCTCTTACAAGGG
TGAACTTTGGTGCCATTTCTAACTAAAAAATGAGAAATAGGCTCTCTGACACATTTAATG
ACATGTGTTAGTATGTGTGTAGAACTTTACACTTAACTTGCATTTCTTTCTTTCTCTCTC
TCTCTCTCTTTTTTTTTCTA
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