SelenoDB
Release 2.0
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Promoter Report for SPR00002740_2.0
Identity
PromoterSelenoprotein N (SelN)
SpeciesTetraodon nigroviridis (Tetraodon)
Promoter IDSPR00002740
Promoter release2.0
External IDNone
Transcript SPT00002675_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002740_2.0 # Promoter # Selenoprotein N (SelN) # Tetraodon (Tetraodon nigroviridis) Full length # Reverse
TCCTCGACGCTAGCGGCGGCTACTTCGATGACGGCATTGCCATCAATTGACGGCCGAAAA
AAAGTGAGTTTTCCAGTAGATTGTTTGCCCGGGTGCAGGGTTTCAATCCCAGCTGTTTCG
ACCCGTGGTTACGCATAAAACGGTAGCTTTTGCTGCACAGATTCTCTCCTCCACTTCCAA
TGTCGAACCGCAAGCTGCGGTTCAGCTGCGTCAAAACGCAAAAAAACACCCGAGAACGCC
GGATATGCGGTGGTTGGAATTCCAAAATTCCCCCCCAAAAACTTAGAAAATATAGTGGTG
TTGTTCACAGGTAGACTTATTAGATGCAGCAACGTCAGACATATAAAGTACGATGTAACA
CTACAATAAATTAGACTCATATATTTTAAGGTTTGCGGTTCGAGAACATGTAACTAACTC
GATAGAATTATTTTGAAAGGAAAAACAGGAAGTTTGCTTATTTTCATTCCGACTCTGCAG
TAATTAGCACTACGGACGGCCAGCGCTAATTAGGCGGCAGCGTTCAACTTCCCAGAAATT
GTTTTTACTCAGAAACGTTGAGTTACGTATTTATCGTCAACTAATTACATGTTTAAACTT
TTAAATGCCTTTTTCTCCGCCAAGATAGGCTCAGATTTCAAAAACAACAACAAATAAATA
CATACTGTCGTATTTCCAATTTGGACAGTGGGAATTGTGGCACATAAAAGACACATCTAA
CTGAATTCATTGTACGTCAATGTTAAAATTTATTAGCATTCCACACAATGTGACATATAC
TTGATATTTACATGGGCAATTAACAAATTGTACTATACATTACCCAATTCAAAGGTAATG
CTTCCAAGTTATCCTAAATTGCCTTGATCAGAAGGCAAGATCCAGCTCAGAAGGAAGCGT
TTATTCCATGTCCTCTTCCACGGACTGGGTCTTCACGTCAACTGTCTTTGGAGGGATGTA
CGAGCCCATTCCTGCAGCCCTCTCTGCTTCTTCCTGAGTATAGGGCTCCTCTCTGAGCTG
TTTCAGCCTACAAAGTGAAAAAAAAATCATCTTATTTAATGGTAACATTAAAGAAGACGT
AGTTTTTGTCAAATAACACACGTAAAAATTACCTTTTCTTGTGCACTTTACTTTTAAAGT
GATCTTTCAATGATTTCATGTCAACAAAATATCGCCTGTAAGATATAATATGTTCAGAGG
GTTAAGGGCACATTCATGATTAAGAATTATTTTGCAGGATAGGAATGAGAAAGCCAACAG
AAACGCAGTAATTTAAACTAAAACCTACGCGCAGTGTAAACAGTAATGCTGTGCGCAGCC
TGTGACGTCATAGTCGACCTCTTGATGGAGTAGCTTAGCAGCGATCTCTGGCTTCATATC
TGAGTGGATCTGATCCAGGTCCTTGGTTCTGCGCTTTGTTTTCCAAGTTTTAGCAATGTT
CTTTTTCCTGCCATTGTTGTGGTTGCCCTTCTGTTTAGATTTCCCCATGGTAGATCACTC
TGCGAAACCAAAGAGTCAATACGCAGTTCAGCATATTACGAACATGTATTTAAAAAGCAG
GGCTGAGTAGTGCATTACCACAGAGTAACGTTAAAAGTATACATCTCTATATCTAAATGT
ATGTATCTTGAAGAAATGTAGTCTGTTTAGTCTAAGAACGAAAACCCAAACACAGCCAAA
TACCGAACATGTACCGTAACATGATTTCATACCAACCCATTCTTAGTGTATTAAAATACA
TAATTACGACAAGTAAATGGTCGAAAATCATATATAACTTTGCATTCTTTAAAAAAAATC
GCCCAAAAGGCAATTTTCTGTTTACTTACTGTCACACATGTGGCTGAGAGGAAGAAGTTG
TACTTCCGGGTCAAACACGTTGGTGTTATACTTCATGCTCACCCGTAGAGGTCGCCAACA
GCACAGATGATAGATAGTCAGGTGACTAGATTGCCTTTACGTACCTATCGTAATTCTTCT
AGCCGAACAGCGTTGTCTTTCGATTTGAATAATTATACCCTGTAGTCTAATTTCATAAGT
TTTACCCAAAAGTATTGGTCAATGGAGGATAGCACATTAAAAAGGTACGTTTATAATTTA
TCCCGTTTATAATTTTGTGAATTTACGAATCAAAGCCCGAGTTGGAATTATTGGAGTGAG
TGCGCCACACTCAAACTTATCTTTCATTGATACGCACAGCATGTAAGAGCAAAAATGAGG
ATACTGCAGAAGTAATTTTGATAAGATGGGGTCTCGGGTGTATTCTGGGGGGAAGCTTGA
CTGTCGTCTTTAAATATTCCGACAGTCATTGAAGGCGGTATCAGACGCTACTCTGCTGCA
TACGCGCTTCGGTGGTGAGCGAAGATGGCGGAGAATAATGTCGAACCAGAGAACGAATGG
AGCAACCGGGCCCCAGACACGGCTGAGGACACTCTTGTTGCAATGGAAACACTGCTTGCA
ACATTGAGAGCCTTTGAAGATGTGCTCAGGCAACAAGATATATCCATTGCATCCTCGGCA
GAGTACTGCGACAACTTCTGTCAGGTAATGTGTACATGCTACCTTAAAGCTACCCCACGG
CTAATAACGTTAGCTCAACCCACGATTTGTTTTTATTTTCGCGCACCTCTCACTCTTTTC
CGAATCGGCTGCTGCTTGTCTAGCTGCCCGAGAATGTGCAGGGTTTTGGGACAAGCAGGG
AGCAAAATATCCCTGTGTGTGTTATTGTTCGTATGCACGCCTGCACGTTATTTCACAGCA
AAACAATTTACCTGTCAAAAACAATTCGCACTGTGGAAAAAAAACACGCATGGTGCTTCA
GGTTATCTTTAGTGATACACCGCGATAGAACTGCCCTACCCTTTTGCACCGTCCGGGAAA
GTTTGAAATATCTTTGCACACACACGCTTTGGTACGCGTTATCGTGCGGTTGTGTATGGG
GCGGGGCGCATCTGTCTTATATTTACCCAAATTAGCATTTAATGTGCGTGCCTGTTAAAA
TTTTCACATCTAAATTTGACGCAGAGTCCAAAATCAATGAAACTATCTAACTTTTCTTCT
CATGAGCAGATATACTGACAATATGTTTGTCATTTAGATCAGCAGAGGAGCTGCTCTAAA
TTCGAATAAGCAGGTTAATTAGCATCAAAGTTTTGGGGGAAAATGGGAGATGAAAACTCT
ATATCGCCATTTAGATTGTCTGATTTTAAAGTTTGTTTCAATCAACTCTGGTAATACCAC
CGTTGGACTGGGTTAAACATTAGCCAGCTCACAGGACAGGCCTTTAACCTTTAGTACGTG
CTGTCACTTAGACAGCAATATCCAACGGGTTTTAAATGTATTTTTGTTCAGTTTGGAAGT
TGTCTGGATGTAATTAGCACACTGATATCTGTCTCAAAGGATCCAGTGTTCAGAGACCTT
TTTTTCCCCTTGCGTTGAGGTAGTGCTGTATATTAGGACAGAGGGGAATTTACTGGATCC
CATTGAACATGGTTCCTTCCATTTCCTAAATGATACTCCAGGGAAGGTGTAACCGTTCTG
ATTTAATATGTCCCACTATATCAAGGTGTCGTACTGATGTAGACGCCCGATGTTGACTCC
ACGCTGGCAGGGAGATCCCGACCATAATTGCCACAAACAACAGTAATAAAAGCATTTTAA
AAAAATTCTGGTCACAATAGGTCACAGAATTTATTTTCCCAATTCTGTTGGTATTTGAAT
ATTGCTAAAATCTATTATTTTTATATTTAGAGGGAGATATTGTACAAATATTCAAAAATG
TCTTATTGTGAGTACTAAATTAGTCATAAACTCTAGACTGTGAAAGATGACAGCATGTGT
TTTTGCACCAAATCTAACCCTAGTTTATTTGAATCATAGTGTGATATCAGAAGGTCTCAG
GGTCGTCCTTTTCTGTAAAATCATCTCCCATTAGACCCAATCAGAAGCGTTTTACATCTG
ACAGATTTAGTCAGCTGGGATCAGTTATTTGAAGGTGGGTCTCTCCCCAGATGCATAACC
CCTCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATGTTCCTCCTGTACGTTGTTGGTACTTTGCATACGCAGCCCTTCTTTATCTGAGCTG
TATTCATTCACTCCATGCGTATTGTAGAGAAACGCTCCAAGTAAGAAGCAGAAAGGTAGG
TGATGTAGGAGTGTGTCAGAAAAAATGGCAGCATTCATCCATTCAAACCACGTTGGACAT
TACAAAAAAGGAAACTGTCATTTGAGTCTTTGGATTATATTAAAGGGAATGTGAATTGGA
TGCAGAAAAAGCGCATTTGCTCACGTCAGCGGTGTTGAGCAGTTTCAGGGACAGATGGGT
TCTGTTTCCTAATTACTTCTTGACTCTTAAAGCAAATAGAAGATCTGCTGTCAACTTTAG
GTGTTACTTTTACACGTGGCAGCTGTATGATTAGGGGACACTCGGGAGGATTTCAGATCT
CATCTGGCTCAGAAGCAGTCCCGCGAGCTCCCAGAGGAGTTGTAAAAAGTGGCTGGGGAG
AGGAAGGACAGTTCGGTCCTCCCTGCTGAAATAGCTGCCCCTGTAACCCAGATAAAAAGA
TGAGCGCAAAATGAAGACCGTTTTCGAGTTTGATTGTCAGGACACCTTGAATTTACTCAT
CTTCACAGATTACATAGAATAGATGCTCTCTGCATCAAAATATTGTCACTCCAGAATAAC
CAAATTCAAACTGGTTGTGGCTAGAAGGAAATGCAAACTTTTCTGTCAGCGCTGAGCTCT
TTATGTAATTTCTGTCAGCTTCATTCTGAGATGCTCATAAATATCAACTTGCTGTCTTGC
AGGAGCTGTTTTGAACTGTTGCTGTCAGTGCCTGAGAATGAAATCCCATTCGAGGCCTGG
GTTCAGTTTCATCATTCAGT
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