SelenoDB
Release 2.0
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Promoter Report for SPR00002763_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesTetraodon nigroviridis (Tetraodon)
Promoter IDSPR00002763
Promoter release2.0
External IDNone
Transcript SPT00002698_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002763_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Tetraodon (Tetraodon nigroviridis) Full length # Forward
CTTCAAAAGGTTCCAGATCATAAAATAACAACCGTTCATGTCCAGCGTTCAGTAGACATG
TAGCAGCTGTTGTGTGGCTGGATGGTCTGACTGCCTGTAGTTTCCAGACGCTGCCCCCCC
CCCCCCAGGTGGACGGCCGAGCAAACAGCTGCTGAGAGGAGGATGAACGTCTTAGGCAGA
GCAGCGTCAGGGAGCCTGCTGGCTCTTTTCACGGTCCTGTTGAGCTGATGCTGTCTGAGG
GAATGCCTTGATGTGTTGTGGGGAGGAGGTGAAAGACCTGCCTTTCTGAGCCCCTGGTAC
CACCAGGCAGCCAACTGCTTTCAGCTGGACCACAGTGAGGAACCCTGATCTGTGTGTGTC
CTGGTACAGCCAGTGACCCTTTCTGTGTCCTCCTGTAGGTCGGTGATCCTGTATGTCAAG
TGGGGCTGCCTCTCGGAACAAACAGCCTTGCAGTGCTGCTGTTGCTTCTTGTGGCCACAT
TTGGATCTCCTTGATCACTGGCCTGTTCTGCTTCACCTCGGTCTGCATGCCGGTGTTAGC
GTGGCCGAGTGATGAGAGAGCAACGCGAGCGGTGGAGTGGTGATGAGTTTTGGCTGTCTA
GAAGCCTGTGACGTTTGCGTAGACCAGGCCCAAAGTTTTTCCTCCTTGCCTGATTGAAAC
CTCTGGCTGCTCCTAAAGAAGGTGTGAGCGTGATGTGCCAGCAGCTCGCTGATGCCAGTG
TAGCGCTAGCGCAGCCTCCCTGCTGCTGTAGTGAGGAGCAGTGAATGGAACCGCCACACC
ATCCTGGCACCGGGCTTTGTCAGTACAAACTTTTAAGCCACCTCTTTGCTTGTCAATATG
CGATGTTACCCTGTCTGTCAAGTTCAGCAGCAGCAGCAGCAGCTCCAGTGCCACCGCAGT
GCCTGTGTTTTTCTTCAGCCTTGCAAAAAACTGAAAACCAACAGTTTCTCACGTTGTGCT
GGGAGACTCTCCACTTAGGTTCTACCTGAAGCTGCTGTCCAGGCAGTGAACATGTGCCCA
CAGCGGTGGAGGCAGTCGGGGCCTGTTTGTATTAGCGTTTACCCTAGCAAGCAGCCCCCC
ACACCTGTCCTGCAGCTCAGGGCGTATCCCCACCCTCTCTGCTGTTAGATTAGGGACCGT
CAGGGACCTCCTGGGGCCTGCAAGTTGCAGCGGTCCAACAACTCAGCATGTGTTTATCAG
AGCAGGACGCGCACGCACGCACGCACGCACACACACACACACACACACACACACACCCTT
CTTTCATACAGCTCACATCCACACCAATGGTCCTGCTATGCTGCCAGAGGAGGCTCCCAC
CAATGCTGTTATTATTACACTTTCTTTGGTTGATTAGCTTCCCACTTCCACCAGAAACTT
CCAAATGCAAATGCAAATCAGCTGAAACAATCACATTGTGTTTTACACATATTTTCAACT
GTGCTGCACGTTGGCTGCAAATATCCGCAGTCCTCTGTGCAGATCGCACAGCGTTTGCAG
TGGTGGCAGGAAGTCCAGAAAGCCAGGCCCAGTATATCTTGTAGAAAATTGAAAAATGTG
GCACATTTCCTTCACACAGAAGCAGCCGTTAAACCTGGTCCTCCACTTGGGCTCCACCTT
TTCCCTTCCAGGTGGTGAAGGTGTAGATGCGTGCTGTCATCCTCCCCAACTTATCTCCTG
TTACTTACAAACACAGGCCTTAGTGGCCTTCATATTCTTCTTTTATTCTGTGTTCATCAT
AGAGACTTGGTAGCCAAAATAGGTTTAGATTATGTTTTTTTTCCAAATACTGTTTGAATG
TGATTTTTCAGGACTCCATTGACCTGTTTCTGGGCAACTTTGCTGTGGACGAGACAGATG
GACCTACACCTCTGCGGGTGCAGAAGGACTGGAAGTTCCTCACAGTCAGTAGCTGGAACC
TGACCCCGACCCTGGTCCTGAAGCCTAGCACCCAGAGAGGGCCGTTATCTCACACCTTTT
GTTTCTCCTCTTGGCAGTTGCCCATCATTATGCTGGTGGCGTTTTCCATGTGCATCGTCT
GTCTTCTCATGGCTGGTAAGTTTTGTGCTTCATCATCACATTTAGCGGTGCTTCTAGGAG
TAAGGCTGAAATCCATCATTCGCAGGTGGATACTTCTATACCTGTGTTGTAGCTTGTTTA
TTGGCTAGTAAACTGTGTCCCTAACTGGAAGGCAAACAAGACTGCAGACAGAGTGAACAG
AATGTGGTGATCATTATTCAGGGGGAAAAAGTCCAACAGCTCCACAGATGGAAGCCTGAG
GGGCCTTTTAATGTGTGGAGAAGTGGATTTTTCAAATGAATTAACCAATGGAACTAAACA
AGGAAAAGACTTCACTCTTTCTATAAAATGTAAATGTGATTTTTAAAAATGTGATATCTA
AAGAAACTACAGAACTACTCAGAAAATTATAATATCCTGAGTAAGTGCATACATTTCTGT
AACCCGACTGTAATAGTGAAATAGTCAAATAGTATCCACATCAATCTATTTAAAGCTTTT
ATTTGCTTTGATGTTGCTAATTAAGGACTGCAGCTTCAAAAAGCCTCAAATGTAAAAACT
CCAAAAATTAGAATATTGCTTGAAATCAATAACATCAACTAAACAACAAAATGGCAACAA
AAATGCCTGTGATAGTTCTGTCAGCGAGGGCACTAGGTGAGTTCCCCCCAGGGTAGCAGA
ACTTCACCAGCCTGCTCAGACGCCCAGCCTGGTCTCGTCCTCTGGCATCAGCCCCTGAGG
CAGCAGCTCCCACAGAAACGCTCCACAATCTTGTGGAGATCTTTCCCGATGAGTAGAAGC
AGCCACCCCGATAACACACCGAACACGTGTGTGTTGCAGCTGCATCTGTCACAACCCACC
GGCTGTGTTGTGTAGTTCTGCGGATGGAAAACTCGTCAAATGCTATAGCATTCATGTGAG
CAGTGGTGCTGACTGTTTGGCTTCACGTCAGGACTCGTTTAAATCACCCTACTGTAAAGG
AAGTGACGCGTCATACATTTCCGGGTGGTTTTTCTTGGCCCTTGACTAAAATGGCAGCAG
GATGACCCTCGCAGGACCCAGGACCTGCTGAAAACCAGCCCTCTTGACCTGGAACCTTTT
TTATTTTGACTACTTCCCAGATGTTTTATGTTCTCTTTGCACGTGGCTTTCTGTCCCACA
TGTGAACAATGTGCCAGATAGTTGAGGCATGTTCCAGCATCCGACCAAAATAAAAGTAAT
GCTCTTTTGTGGGAGGACGATGGGAGCTCGCAGCCCCAGCTGCAGCCAGCTTCCTGCGGC
ACTTCTTGCTGCAAAAGGTGAACAGCCCATGTGGACGTGCATGCAGCCCACTGCTGGTGC
CATGGCCAGGTGTCCGGCCTCTGTTGGCCCTATAGTGTGCCGTTGTGCCTATAGGTGGCT
GGGTCACAACAAAGCCCCAAGCTCTGAATCTCTAAACAACCTGGGGCCTCAGGTGTCTCA
GCTATGCCATAAACCAGACAAGAGTTCCATCTCAGAGGGAGAAGGAGTCATCATAGGCCA
GGAAAAATATGTTTAAACTCTTAATTTTTTTAAATGTTCTATTAAATGCCACTTTTATAA
ATGTAAAAAGTATCTGGTACAATCAAAATTGTCTCCAGGCACTCTACAGAAACACCCAGT
CTAACCCCTAGCAAGCAAGAATGGCAGAAAACCCCCCCCCTCCTTTTTAACAGGAAGAAA
CCCAGATAAGGACCAGGCTCATACAACTGCAGATGAACAGATGGGTGAAGGAGGAGGAGG
AGAAGGGGGCTGGTGCAGGAAGGGAGGGTGTATAGCACACAAAAGAGAAGGTTCACCGTA
GTTGAGCTGTGTCCTCCTGTTTGTTTTCTAGGCGATACGTGGACAGAAACTTTGGCCTAC
GTGATGTTCTGGGGAGCAGCCAGTACCATCACCGCCACCATCATTCTGTTTAATGGCCAG
GACTTCGTGGACGCCCCCAAACTGGTCCACAAGGAGAAGATGGACTAGAGTCTGTGTGTG
TTTGTGTTTGTGTATGTGTGAGAGCCCGCCCTTCCCCAGAGCAGAGAGAGAGAGAGAGAA
AATCCAAATGAGAATCACGGTAGTCCTCAACAATTACGAGAATCCAGCGTAGTCTCCAAC
CTGAGGGTTTGTTGTAACCTTGTGGTCCACACATGCTGGTTGAACCTGCCCACTTTCCTC
AGATGTATCTTTGCTTTGACCAGTTTTCTGATTTTCTGGTCCCAGTCTGAGATTCTCTTT
GATGGCACAGTTTTCTTTGCTCTTACTTCTATACATTACAGTACAGCGAAATTTGTGATT
ATGATGGCCTTTAAAAGCAGTAAAAGACTGGGGGGAAAAAAAAAACTGTATTCTGTTTGA
CTGAATTACAACTATAGAGCTTTTGGACATTTCCCTAAATCTCTGTCCAGTGTCTGCAAA
ATTCAAAAACCTTTGAAAAGATAAAATGTCTGTTGTCCTAAGTACTTGTTAATACAAACT
GATATGCATATACATAGCTATATGTACATTGCTTAACAGTGAAGGGGAGGAAAAGTAGCC
TTAATTATTTTAGGGATTGTATAGATTTGCACATGTCCAAAATAGTTCAAAATGCCTAAA
AGCAATTACAAAGCTTTTTTTTCTCTGTACATATATACTATTTATTATATATGTTATTAT
TTTGAATTTATTTGAATAGTTTCCTTATAGAACTCGACAACGTTTGACCTGAAGTAAGCA
AAAAAATAAAGTACGTGAAATGTCAGTACATCCCAACACTAGGGGGGGCCATTTTTAAAC
AGTCCGTGCGGAGTCGTTATGAGGATGCAGAAGAAGAAAGGAGAAGAGGGAGGAGGAGGA
GAAGAAGAAGAGGAAGAAGAAGGAAAGGAGAAGAAAAAGAAGAAAAGACCGATCGCACAT
GTATGTTTTACAGTTGCCATGTGCAAGCTAACTTGTTTAAACTGAAGGTCTTTGTTAACT
TTTCCAGATTTATTTCTACA
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