SelenoDB
Release 2.0
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Promoter Report for SPR00002937_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesXenopus tropicalis (Xenopus)
Promoter IDSPR00002937
Promoter release2.0
External IDNone
Transcript SPT00002872_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002937_2.0 # Promoter # Selenocysteine synthase (SecS) # Xenopus (Xenopus tropicalis) Full length # Forward
TCTTGCACAAGGAAGTGTTTTCCTCTTTGGCTGCTGTTGTGTCAAGGCTTCACGTCACTG
AGCCTGAGGCATTAGGCCCCAGTAAAGAGAACCTGCTGTTTCTAAAGTCGGGGACAGGGC
CCCGTGAATGAGAACAAGCCAGCACAGTCAGTCTTACTTAATAGCACCCTCTAGGAGTGG
TGAGCATAGTCAGCTTATTAGTAAGGGCAGCACTAGCCCCACCAAAGGAGACTGTAAGGG
TTTAGTCTAACCCAGGCTTTGTATGCCTTGCTGTAGGGACCACAGTTAAGACGTAGGTTT
CAGGCAGTACCTTACCCTGAACCATAGTTGGCTGGAGGGGATCCGTTCCAGTAAAGAGCA
TCCATCCTGGGCGCACAGCTAATACTCTGCATATCCTTCAAGTGGGCTATACTGTTCCTT
AAGTGTCACATCTGCTATTATTCTTTGTGACCATCCAATCTGCTGTCTCTGAGTATAATC
CCTGCTGCACTGTTGAAGTTGTGCCTTGTCCAATAAACTTGTACTATAGTTCATCAGCAA
GAACCTTTCTGGCGTCCATTATTCTATCTGCACCACATAAGCTCTATATAGTTGTAGTTC
AACTACACCCTCAGCTCCATTAATACCTCCCATATAGCGGAGGCCCACTCCTGTGTATTA
AGGTCGCATGTAACACATGCTCTATACCTATCACTAGCTTGNGTTTTGCCATATCTAAGC
CAAACAAGTGTTACATTTGGCGCCCAACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGGCTGCAGATTTGGGACTGACATCGGCATCCTACACTGGG
ACCAGCGGCTGCTGCCCGGGTGACGGCGCCAAGCGCATCTATACAACAGTGAGTACCCCA
CGGCTGTGGGCTACCCCTGCTAGCAGCCCTACTGATTGGATCGCGGCTGCGACCGACATA
ATAACAGCTAACGGCACGCTACATATCTTACCAATCCCGGAGGCGACCAGGTCCTTCTGA
TTGAACCGCGCTACCCTGCCAGTCTGACTATTGACCCCCAGGCGCGCTTACAGGCTGCTT
TATCCGTCTGGGATAGTTTGTGCCACGGGTCAGGACTATACTGTTGCGGCTGCAGGGCGC
ACTTCATATTACCAATCATGGCTGAGGCTACCGAGCCACGGAAGTCTAGCCCAGAAAGTG
TGGAGAGAGAAATTCTCCTACATGAGCGCCTAGTCTGGCTAGGTACGTTTGGGGAACGTG
TGACTGAGGATGGCTCTGTGATGGTAGAGCCTTATTGTGCCCACTGTCAAAAACCCATCG
TGCAGGCCTGGAAGGAGCTGGAAGAATGTTGTCCTTTTTGCCAGACCCGCTGCTGGGTAA
GGCCTATGGAGGCCAGGAAGGGACCCGTTTCCACGCCAGGGTGCCCTGCTACCTCCAGAC
CAGAAACACCGTCGCTTACAGCCTTATACCCGCTACATCCTTCCCTAACGCCAAAAGTGG
GAGGAGGAGGGGTATCCTCCAGGTCGGCTAGTCCAGAAAGGGAAGCTGACGCCATTTCTG
TAGCGGCCTCTGAGGCTATATGGCCTAGCGACAAGGATACTGAGATTCCACCCTCATCTA
TAATTTCCACGGCTGTGTCTGAGGTGGAGCCGCACCTGGCACTGCTCAAGCTAAATGTGG
GACGGGGAAGGTCACGCTCACCTACCCCAGAGGGAGCCAGTGCTATTTCCACTCCATCCA
CTGGGAGTGACATCTTTATTAGCAGCACGCTGGCCAGACAACGACAGGTTCCAAATTGGA
TGGCAATGGATTTTGGGCCTCTTTCAAAGAGTACCCTTGATGAGGAGCACCAGCCATTTG
AGCCTCCTAGACCAAATGAGAGACCCTCTAGTAATCCACCAGGTTGGCCCACCATTCCAC
CTCCTCCGCATGTGGTCAGCAAGGATACCTCCTGCTGGGTTGCCCAGGGGAGGGCTGACC
CCGGAAAGTTCCGAGCGGTATCGCGGGTCCAGAGACTCATCAATGAGCGGGTTTACCAAA
TGTGGGGCTTCTACATGCCCTATGCCCCAGAGTGGGTATTTGATGAAGTGGAGCGGCTAT
TGGACGAGTGGCTCTACGGAGTCCTTATCCGCCGGGAAGGCCTGACTCCTGGAGACCTCC
TGCACCAAAATGCCACAAAAAGGAACCAGGATGCTGAATACCTAGCAAATCTTGCAAGAG
AGTGGTGGTTCGGCCGAACCATCTTGAAGCATGGAGTCCGGTCTTGCGGAAAGTTCCAGA
AGGACCGCACCTTTGCCCTACTATCCAACCTTCCGTCAGGGGCCAAGATTGATAAGCCTC
ACCCGACTTACTATGTCTCTTTTAAGGTGACAAAGGACAAATACGACCGAAACCTCTATT
GAAACTCCATGCCGGTCTGGATAGTCATCCCAGATGGGATTTTCCCCCGGGTGGGAGGTG
GGTAATGTTTTCCCTAAAGTTAAGGGCAACATCCACCATTTTGGGCACATCCCGAGAACT
CCCCCTTGTTGCAGAGACATAGGGTGTGACCCACCTTCAGCTTTGTCCACAGTGATGGAC
TTGTTTTTGTTCTAAGTTTGGGACTCTCAAGGAGAGACTGTAAAGTTTGCATAAAGTTGG
GTGTACAAGAAAAGACTGCTGCGCCCCATCCCACTACAACTTCTACTTCAACCTACCTGA
GGGTAGGGCCCATTGCCTAATCCACACCTACGGAGTGCATGTCGGGAGATTCATGAACAC
TGGGTTAGGGTGGAAGGCCTGGACTTAATAAAGTTGATGGGTGGGAATGTGTCACAGTTT
AAATTGTGCCCACTAACATTTCTTTACAGCCAAGCATGTACCTGGGACACCTGAATGAAG
GCAGGATCGTTCCCATGTGTAAGTGTGTACCTGAGCACCCCTGTTAGTGGTCAGGAAGGT
GACTCAAGATTCTCTAAGTATTGTGCCTGTTATATCCCTGTTGCAGAGTTAGGTGATATT
TCAAGGATCTCTAAGTAACGTGCCTGAGTGATCCACTGTGACACTCATGTATTGTATATG
GTTTCCAGAAACGTAACTAGTAACGAAACAGTTAATATTTTTGTTTAAACCAAATCTGTT
ACAGCTAAGAATGTGCCTGGGAACCTGCATAGCAGGAGTATTTCCCATGTTGTACTGGGA
GTGATCCTACAGGACACTCAAAGTGTATATGAGTCCGTAAAAGTTGCTGTATGTGCCTAA
CTTTTCTTTACAGCTATCCAATTTCAGTTCTTAGGCTACCCCCTATAGGTTTAGCCCAGG
CTGACCACTCCCCTTGGCAGACTATATAGTGTCTTGCACAAGGAAGTGTTTTCCTCTTTG
GCTGCCAGTCTGCTACCTGAAGCAGCACTCCATTGAGCCTGGGTACAGATCCGGCCCAGT
AGCCACATATCCATCCAAATTAAAGTCAGGGACAGGGCCCCGTAAATGAGGAGAAGACAG
TATAGCAGCATATTTCATAGCACCCTCTAGAAGTGGTGAGTTCAGACAGAATTATATAGA
AAGAGCAGCCATTTGCTCCATCAAGGATAATAGCAAAGGAGTAGCCTTCCTAACAGGCAT
TACTGGCCTTAGATTAGGGACACAGAAGTGCTAGGGAAATAGGTTAGCAAATATGCCTTG
CCCTAACCTCCAAAAGTGCATGGGACTATGCCGGTGAGCTTTCCTATCACACTGTTGTTG
TTCTACCTGCCCAACCTCTTGATGAGAAGGGATATCCAGGGGAGCATCATATTTCTGCTA
TTCATCTATTTTACATCAATTGTATAACTGCATACTGTGTACCAACTATTGAGTGAGTAT
TTAAACCCCTGCATACCATTGTCTTGGACAAATAAAGTATTATCCAGTTCATCCATAAGA
ATCCTCTGGCGTCCATTTCTATCCATTGCACCACACTACCTCAGCTCCATTATGTACCTC
CCACGTAGCGGAGGCCCACTCCTGTGCATTAAGGTCGCATGTAACACATGCTCTACAGCA
CGCTACTAGCCTGGGTTGGCCATATTATAGCCAAATAGGTGTTACACACTGTTTCTGGCA
TTTGCGTGATTAGGCTTGGGAAAGCTATCATTCTATTGTAATACACACAACCACATTAAT
AAATTGCTGTATGTGGTAACAGCCGACTGAGTGCAGTGCTCTTCTCCCCATATAACTTTC
ACTTCCCTCCATTTATAACAAAGTGCTCCTCTTTGATCCTTGCATGTGTTTATACATAAA
TACAGATGTATATAGTATCTAAACACACCACTCCTTTTTGTTACCCCTTCCTTTACGTGG
TTCAAAACAGGCCCCATGACTCCCTCATACACCTGCCTAAGTTTCTATGGACAGCTCTAG
GAGCCAATATGTCTGAGAGTAACAACGGCAAGGTTCCATTAGCAGCGCCACATTGCATTC
CACACAAGTCAGACCCCCGCCCCGTTGCGCACTATGGAATATATCAGCCCTAGGCCACTG
TAATACATCTCGTCCACGTGCCTATTTATAAACTGCACGACAGATTTCAGCAACAAAGCA
GAATATTCGGTTAGGATACCCCTCTTTAATCAACTGTAACTCATATCTAACCCCGCCACT
ACGCGTATTATTCGCATCAAACACCTATAGCCCCAGCGCTCTCTTTCACAACAACCCAGC
GCTCTCTTTCACAACAACCCAGCGCGACCACATACGTTGCACTGACTTCTAGAACCCCTG
CGCGCACTATTTAAGCAATACGCTGCGGCTCACGCCTCGTTATGGTTTCTAACGCCAATC
ATACTCTGCCGTAATTTACGCAAGAGGGTGGTACGTTGCTAGGGCAACTGTGGCACCCAC
CCCTTACACTCTCTCAGGTGATTGGCTATGATGCTCCCGGTTTAGACCAGTGCCCTGGCT
TGAGTGAGTGCGCAATGTCCATGCTCTCTTTCTGATCTACGCTGTGTCCATTGCCACCTT
TACTCACTTCATTGCCCAGA
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