SelenoDB
Release 2.0
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Promoter Report for SPR00003165_2.0
Identity
PromoterSelenoprotein J (SelJ)
SpeciesXiphophorus couchianus (Monterrey platyfish)
Promoter IDSPR00003165
Promoter release2.0
External IDNone
Transcript SPT00003098_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00003165_2.0 # Promoter # Selenoprotein J (SelJ) # Monterrey platyfish (Xiphophorus couchianus) Full length # Forward
TTGCATGACCAAAGCAATCAGCTCTCCCAGCGACCCTTCGTACGGCGTTGAGAAAGAGCT
CGGCCAGAGCGGCCTGGACGTCCGAGGTCGATTCCTCAAAGGCCATGTGTGTTAAACTCG
GGGCCCGGGGGCCAAATGTGGCCCGCCGTAGCTTTTCATGTGCATAAGTCCTCAATAAGC
CCCTCTAGCTTTTCAGCGAGGGGCTGAAAAATTCACACAAAGTCTGCAGATTTTTCTGAT
TTTTGCTGCTAATTTCTTTCTCAAAACTGGCCAAAAACATTGGGTTTTAAAGCGACTGCT
GCCTCAGCCTCCCTTGATGTCAAGTCACAGTCCATGATCGATACGGTGATTAATTAGTCA
CGTCCAACATCATTCGTTAGCACAGATATCATAAAAAAAAATTTCCTCCAAATATTTCTA
AACTAGCGCCACAAAATCTGTCATTTTGACTGCCAAAACACACACACACACAAAATACAA
TCACGAAACCCTGACCAGTGTGAAAGGACGTTCAGCATGATTTCATTTTAAGAAACGCTG
AAACAAACAGCTATTTATCGATATTCAGTGGGTTTTTATCAGCCCTTCTTTAAAAAGAAC
ATTCGCATCGTCGATTTGGCCCAAAACGAGAACGAGTTCGACACGACCTGCCGTAGGCTG
ACGCAGCGGGTCGCTCGCGCCGCGTCCTTATCTCTTGGCAGAGCAGAGGCCGAGTCGCTC
GGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGGCCAGTAAATA
ACGGATTTAACCCAAAACACTGTTAGACATTTTAATTAGTGTGGTCATTTAATATGAAGC
TTATGTTTTTTTTCAAAATAAAAGCCTCAATATCCCCCTCAGGTTAATGCACCGCCATAG
GCGGTGCAATAATATTAGCATGCATTATATTTTTCTCTCAGGTTAGGGAACTGCCTTGCA
CAGCAAGGCAGTTCATTAGCATTAGCATTTTAGCTTTAATAAGCTATTAGCTATTTATTT
TACTTTTTAGCCATGTTTAGTATACTGAATGGAGTAAGTCAATTATAGAAAACATCCTAG
TGATGTCCCACATGCTACTGACAGCAATCACGCTAACATTAGCATTTTTGCTCATTTTAG
CTGATACACTTACTTTATCATACTGACTGGTGCAAGTCCATGTTAGTAAACATTCTTGTC
AATCTCCTCATGCTATTGATTACGTTGCAGCTTTCTTTAGCATTGATGCTAATTTCTAGC
ATCAGAACGCTGGGTCCAAACCGACGGGCACACTTTGGCAGGCCCCGGTTAAATTTCTTC
AGGAATTTTCTAGTTGATATTTATTGTTGAATACATGAAGCTAGCTTTATCCGTTCGTTG
TCAACCCAACATGGGGATCACGCCAAACAGGATAGAAGAAATCAGGGAAGTGTCACAAAA
TAAACAAAAAACAAAACAAACAAAATGAATGAAAAAGTTGTCAGCCCGCCCTCACAAGTA
CTACAAGCAGAAAAATGATCCTAACTCGGCGGGCTAACAAAAAAGAACAAACCAAACGCT
AAAAGGGACAGCAGGAGGCAGTGCAAAAACTGTGAAACAAAAACACAAAAATTACTAAAT
GTGTATTAAGTCATTTTAATCAAATCAACCTAAAAGAAATTAAAACTCTTGCCTACCTGC
ATTGCATAAATCAACACTTCCAAATCAAATCTTGGTGTATCCAATCTGGTGCAACCCTAG
CAAATAAAACAATATATAAACACACTCGGATTCGGATTAAAAGGACCAATGTATAAAAAC
CTACCTGCGGCGTCGAACACCCACGCCCAGGTAACGCTACCAGCCGAACACCATCAACAA
TGCAGTCCTGTATAAAAACACCACATCAGCACCACTTGCTTAAAAGAAGCACTTTAAAAC
GATTTCCCCCAACCTACCACAGCCAGCAAACAGCGTTGGCCCAACACACAGCCGGCCTAA
CACACAGGAAATGGACACCTGGCCACCACCCTTCCAGCTTCCCTTTTCTGGAGGCTCTGG
CTGGAGAGAGTGCGACACCTAATGGTGCCACCTGGTTACACATGACAGTTTTATTTAGCA
TCATTTTATTAAGTGAATCTCTCATACACCTACTGTGTAATGGTGTGGAAAAATAAGTCA
CGTTCTTGGACAACTTAGTGCATTTATTTAATGTAGGACATCAGACACGAGCTAAACGAA
GGAGCGCAGCACCGTCACGTCTCCGTCACGTTCTTACTCTTCCCACCGTTTCTCTTACTT
CTTGTCGGTGGCTCCACCTAGTGGCGTGGAGGGACATAATGCTGCGAAACAGCACATTTG
CATAAATGGGGGTGAAGAGAAAAACACAAAGTCACACAAAACATGATGTTGGTGAATTTT
CAGAAACTGTCATTGCCCATTTTCTTTACACTGGCAGGGTCAGGTAAAACAAAAAATTAA
AATTGAAAAAACTTAGCATTATACAGAGAGACTTTATTGGCTAAGCCTAGTGTTTAAGGA
CCTAAATAATTCTGAAAATCTGTGGATTTTTTTTTTTTTGTGTGTGTGTATGCTGGCGAA
TTAAATAGGGAGTGGCTGTAAAAAGAAATTGGGCACTATGAATTCATACAGAATATTTCT
AAGGCAATTTTCGAAAGATTTTTGTGTGTGTGTGTGTGTGTGTTTGTGTGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCGACACAAATGGAATAGGAACTGAAGGCATCCCAGAGTGTTAAATACTAGGCCTTGA
TTCAGTGCGTTAAGTAACAGTTTCTCATAGGCTGCATGTGATTGGCTGTTCTTATCACTT
GGCTGACCGCTGTTTTTAGCGCCTTCCGGAAAACTGACTGAAACAGGACTAGAAGGAGCA
GCACAGAAGGTTGCACGTCGAGGTAGGTATGAAGAGAAGAAAAAACTGTTTAACTGATGC
TTTTTGTAGCAGAATATAATGTTTTGATACCTTTTAGTGACAGTAAACCTGAAGTGTTCG
CATAGATATTCAATTACACTGTAATTTACATGACAAAAGTGATGACTGGTGATGTTTCAT
TGCAGTCTGTTGCAACGTAGAAGTTGCAGAAGCTAATAGCGCGACGAGAACCAAACGCAA
TGACTTCTGCATGTGGATTTTTTTTTTTTTTTTTTACTCTGCGTCCGGGTCAAGTATTTT
TAGCCACAAGCTACCATTTTCCCCAACAGCAGTAGGGAGCTGTACTGTATTTCCATTTCT
CTAATGAAATTCGCAAACTTTCATTTCAAGCTGTAGTTGTTTTGTTTTGTTTTTAATTTA
TGTATTTTTTTTAGTATGAGACGTCGTAATGTCAGACATATTGAATGTCTTGTCTGTGGT
TTAATAGAAGCAGATGGCCTCGAGCGCGGCTGACAGAGCCATTGGCGCCATTATTGGGGC
AGCTGTGGCAGATGCAGCAGGTGAGATACACACCACCTGTACAGATAACACTGCTCAGTC
ATACAGGTTACGTTGCTGTTAAAAGCTCAACATATTTCAAACAGAATGCTGTTGCAATGT
TGTTTCTGTTTAGTCCAGTTGCGCAGATGCTTTATCCGTTAGAAACATCTGGACGTGCCG
GTAGAGTTTAAGGGAGGTGCCGTCGTTTCTGAGCCATGCTGATTACACCGAACAGCTACA
CTGATAAACAAATTCTAAACAAGTGCATTCGTTCTTGTCACCACGTGTTAGCCTTCAGAA
CACTATCAAATTGAACAAAATGAACGGACGAACTCTGATTATGTACAGTTTGAATCAAAG
ATGGATTTTAGTCGGCCCTTTCACTTAGAAACCCAACCTGGGCTCGGTCAGATTTGACGG
AGTTCGACAGGGTGCTCGGAAAATAAAAATAAAATGATGCAAATAAATTCAAAATTACAA
GAATAAATTCATAGCATTACCAGAATCAACTCGACATAACACGATAATAAAGTATAAACA
AGAATAAAGTCATAATGTCACAACCAATCTTGTAATATTATGACTTCATTCTTGAAATAT
TTTTGACGTTATTCTCATATTCATTCAACTTTTTTCTTGTAAAATTATTCTCATGTTATT
ACAAATTTATTCTCGTAATATTATGACTTTATTCTGGCAATGCAATGACTTCATTGGAAG
TCATTTTCCTTTATTATTATTATTATTATTATTATTATTATTAATATGGCCTTAATACTC
AATCGTACTTGGAGGTCATCTATGATTTTCATTTGTCATAATTCGACTGGGCCGATCTAA
CACATCTGAATGTTGTTCTGTGGAAGATGAAGCTCCGCCCCACTTCTAAGTCTAAGCAAG
TTTTCTCCCAGGATTCTTTTTCTTCTTCCTGTCTAACATCTCCATCTTGGTTAAGGAAAA
ATGCTTCTCTTTGTTGTACCATGGCACAATTTCAGATTTTACTTGTGAAAAATAAAACGC
TCCCTAAACTCCATTTCACAATTACAAACTACTTTGTGTGGGTCCATTAGGTACAATGTA
TTAAAGTCTAAAGATGTAGCTTGACAAAATGAAGAAGGTTAAGGGCTTTGAACGCCCTTA
TCTCCCGTTACAGAGATACAGACCATTAACAGCAGGTAAAACACTTTAGGAAAGCAAAGG
AGAGAGAGAGAAAAAAGAAGATATTATAAAGATTTTCCATCTCTTCCCGTCCCTCCGGTT
CTCCGTTTACCCCTACAGCT
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