SelenoDB
Release 2.0
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Promoter Report for SPR00003193_2.0
Identity
PromoterSelenoprotein N (SelN)
SpeciesIctalurus punctatus (Channel catfish)
Promoter IDSPR00003193
Promoter release2.0
External IDNone
Transcript SPT00003126_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00003193_2.0 # Promoter # Selenoprotein N (SelN) # Channel catfish (Ictalurus punctatus) Full length # Forward
GCGCGTTTTTGCCGCCACTTAGTGGCCAATCATAAAATGGCCGCCTACAGTCAGCGCATG
CGCGGTAGTCTTCCACTGCGCCCTGAACCCGGAAGTAAATATTTGACGGCGTAAACACGT
GGATTGTTGAGAACGCAAGTCGGTGAAATAACAGTAATATAGGTAAGTAAACGTTTCCTG
GTGACATTATGTATCTAATTTATTGGTTCTCTGTTATTTATTTAACGTTTTATTACTCAG
ATACGCTTCTTATTCGAAGAAATGGAGGTAGTTATTACTAGATTATACAACACATGAACT
CTCATTGGTTATCTATCTAGTTACAGGCAACTAAAATGCTAATCTAACTCACTTTATAAA
CTTTAAAATAAATAAATAAAGTATTTTCTACCACTGTAGTATGCACTAAAAGCTTCAGTG
AGTAGGTTTGCCTCATATATTAGGCTAATATTTCAGAATTAATATGAAAGCTGGTCTTGT
GTCTGTCTTGATAGATCATGGGCAAATCCAAGCAGGTGGGCAACCACAAAAATGGCAGAA
AGAAGAACATTGCAAAGACATGGAAGACAAAGCGAAGGACAAAGGACTTGGACCAGATCC
ATGCTGACATGATCCCTGCCAATGCAGCCAAACTCCTGAAACAGGAAGTGGACTATGATG
TCACAGGCTTCGGTCAGCACTACTGCCTGCACTGCGCGTGAGTAACTCACCTGACAGATG
GCAAAATATGGACAATAAATCATGTAATGCTATCACCATGCCCACAATATATTAGAATAT
ATTGGCACCCTTGATTTTTGATTTTTTTTTATATATATAAACCTGTGTTGTGTTTGCGAT
TGTTTTGATATCCATGAGAGCGGAGTATTTTTGTGAATTAATTAAAACAATTTTTCACAG
TGTTCTTTGCTCATATTTACCAAGGGTGCCAATATTAATCAAGGGCACGGCACTGGAGCC
GATCATAATCTATCGATATTATATTGTCATATTCCCCAGCTGTAGTAACACATGGTAATA
AAATTGCTGCTGAATAGACATTCGTGTGCAGCTTTTAGGTCAGGAAGTGATATTTATGAT
AATTCAGCACATGAGGCCAGCATGAATACCGCTGTTAATCACTTAATTGTTGATTAATTG
AGATTAGTATTGATTGCAGGCGCTACTTTGTTGACCTGAAGGCCATGAAGGAGCATTTCA
AGACCAAAGTCCATAAAAAACGGTGAGTTTCACACTGAATGCCCATGCAAATTATGTACT
CTCGCTAACTCTCTCTCTCTCTCACTCTCTCTCTCACTCTCTCATATATGAGAGAGAGAG
GCTTTATAAGAGAAAGCTCTTCCCCCTGCTGTAGCCTTCACTATTCGTGGTACCAACAAA
TAACCTGTACCTTTTGACCAAGTAGGTATGGCGTCTGTTGTCTGTCGTCTGGCTTCGCTA
AACATACAGCTGTGTATCATCAGCATAACAGTGGAAGATAATTCCATGTTTACGAATAAT
TTGACCCAGAGGTAGCGTATATAAAGTAAACAGCAGTGGACCAAAAACAGAACCTTGTGG
AACACCAAATTTAACATCGGTATGTGTAGAGAAGTCGCATGTATTACATGTTGATGGTGT
GCATGTTTCTGTTGTGGCCTTATTCCTAGTTCATGTTGAGATTTCCTGTAGTACAGGAGG
CTCTCCTCCCGTGCCGTGTCAAATTTAGTTTGACGCCGTTTCCGCTCTAATTTTCGAGTG
GTCTGTTTTAAGGTGCGCGTGTGATCGTTATACCAGGCTGCTCGTTTTTTCTCTCTCTTT
AATTATATATGGGGCCAAGATTTTTAACAGATAAAATGCAAATTGATGGATAAATAATCG
AAACAAAAAAAAAAAACACAGACAAACGGAAGAGCTCTGTGTTTTAACCTTTAAAACATG
GCAAAACAACTCTCTCTCGCGCTCTCGCTCTCTCTCTCTCTCTCTCTCGAAATTAATATC
AAGAATGTGTCTATTTGGATTGCGTAAGCTTTGTTTTTTTTTTCTCCCCCGTCCAGGTTG
AAGGAGCTCAGAGAGGAGCCGTACACCCAGGCCGAGGCGGAGAGAGCGGCGGGAATGGGC
TCGTACGTCCCACCTAAAAAGGTCGAAGTGCAGACGCAGGAGGTGGAGGAAGACATGGCA
TGAACGGCGTCCGTCATCTCAAGACGACTGCGGCGTGACGGTCATTTTCAGTCGGAGTAT
CTCACCCTCGGACGCCTTTAGACCTAAACCGCGGGTTTTTATTCGTAGTGTCGGAGTGTT
AAAGCACCGCGCAGCGTGTTATCAGGTATATTAGTGATGGAAAGCCTGAGCTGTATAGTG
CGCTGACTAAGAAAGTTCCTGACTGACAATTTACCTGTCAATCAAATCCCACAGTAGCAC
ACTGATGTGGTGTGTGTGTGTGTGTGTTCTGTGTATCAGGATTTGACTGGACTGACCACA
AGCGACATCATATGTAAAGTCATGTAAATAAATTGTGAAATCACATTTACCATGTGTTCT
GCATACATACTTTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCC
CCTCTGTATCTCGGTGAACCCTTAACAGGTTTTAAATCTACTTCAATTACTTTGAAGACC
TGAAAATAAATGACCTTTTTTATATATATATATATTTTCTCACTAGAGATGATAAATGTG
AAAATGTATTGGCACCCGATAAGGACAGTGTGATCATAACAGCTAAACACAATAATACCA
GTGTTGAATTTTATAATCTGATCGGGCAGAAGGTTGGTCGATTAGTTTTCTGTAATAGCA
GCTCTGACTCGTGTTTATATCAATCCGCTCGTCCTAACGCGTTCTCGTTTCTATAGCAAC
GGCTTACTCGAGGACTTGTATGATGAAGAAAGGAAAACCTTGCGTTGTTGATATCGTGAC
GTTTTCTGCAATCACGTTTATTTAACACTTACGGAACGTCCGATCTTATTTCTAACGTAC
CGTATTACAGATCATCGTGTGTATGCTCTTGAGTTGATTCTGTTGTTGATCTTGAGTGTA
ATTGTTGAGTGCTGTCGAGTAAGTACCTCACGTTCGTTGCATTACTTTGATTAAAATGAT
GCTAAATAACGTCACCTCGCTAGCAAAATGGTAGCTCGTTCCAAATACAAACACGCCTCA
CAGTAAGTATACTCCCACCCCCAATATCGACCGACTGACGGGTGTCTGCACGAGGCGTTG
GAAATTTGCGACTCCGTTCGAATTTTGGCAGAGACTGTACGTTCGTGTAAACGAAAACGC
CAACGGCAGCACGCAATTTTGCGTGAGTTACGTCTCGATTTACGCGCCCACCGTCATCGA
AAAGTCACAAATGAAACCTCTCAGAATCGATAGGTTCTAGATCTGACCCTGTAGATTAAG
CGGTATGGAAACCGGAGTACCCTGAGGAAACCCCCCCCATCACAGAGATCACCAATCCTG
GAGGTGTGAGGCGAACCTCTAAGCCACCATGCGCCCACCATACCACAAATACAAAAGGCA
AATGCAATTTACAATAACTTGTGGAACATACTTATGTCATATAGCCACGACTCGAATCAC
TAAAATGAAATATTTTTACCTCACAACCTCCATCTCAACTTTTAAGCGAAAAAAAAAAAA
AAGGAGTACTGTCCCTTTAAGAATGAAACCGTGTCCTGAATGGACTCGAGGCCGAATCCC
AAACCGCACGCTATTGGACACAACACAAAGACGTTCACGTAGTGCGCGTACGCGATGGCG
TCACTCCCCTCACGTAGTGCGCTTATATAGGGAACGGGGAAGTATTTGGGATTCGGCCAG
GGTGATGTGAAAGGCAGTTTCTCCCCTTCTCTCCTCTGCGATAAAACTATAAAAGTAGTG
TCTTGTGCAGGTTAAACGGGTTTTCGGTGAAGATCTTTTAAATGTAAAGAAGACACGTGC
TTTAGGGATGGCGGAGGATGTGGATAAAGCGGTTCTCTTAGAGGATGAGGAAGAGAAGGA
GAAGAAGAGGAAGAAATCTGTAAATAATGATGGAGATCAGAGCGCGAAAACGCGGCGCAT
CTGGGCTTTCTGGACTTTATTCACGGTCGCGTGCGTTCCGGTAATCGGTACCGTGATCCA
GTGTTTCAGAACCGCACAGATCTCCGAGCGTCACGTAAGTGCCAAGTTTGCAGACCATGC
GTTTTTTGTTGATCCGTTTTTGAAACAAGATGATCGCGAATGCACGGGGCGATTTCAATC
GATTAATCGGTGCACCGCTGATTCAAACAAACAAACAAATAAACAAACAAACAAACAAGC
TGCATACCGGGCGGAATCCCGGTTATGACGCGAGCCCCAAGTGGAAGACGAATAAAGATG
AACGCACGAGTCGATGGAATCGATTAATCGTTGCAGATGTTGTTGTGTGGCATTGTTTCT
TTGCCACGTATGTGTTCTAGGAGAACAGATGGTTTATTAGGGGGTGGGTGTTTGATCTCT
CTCACTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACA
CACAGAGTTCCTTCCTCCATTACTTAGTGGTCTTTACGCACAGAACTCCATCCCTGCCCC
CAAATCACATCTCTGTGCAGACTTCATGCATCATATCTGCGTCGTTCCTGTTTAAATCTC
AGCAACTATCGTTCATTTCATTCATTTGGCACCAAAATGAGATATACCGAGATATAAGGA
GATATTCAGGGTGTCCTAAAAGTCTCCATACATAAGGAGGAGTGAACTTGTTTGTTTGTT
TGTTTTCTTGTTTGTTTGTTTATAGCAAAATGTCTTCCAACATTTTTAATACTTAGTTTT
ATAGGATTATATATATATATATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATATGCATAATGTATATATGTATGTA
TGTATGTGTACTGGAAGTGC
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