SelenoDB
Release 2.0
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Promoter Report for SPR00003284_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesXiphophorus couchianus (Monterrey platyfish)
Promoter IDSPR00003284
Promoter release2.0
External IDNone
Transcript SPT00003217_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00003284_2.0 # Promoter # Selenocysteine synthase (SecS) # Monterrey platyfish (Xiphophorus couchianus) Full length # Reverse
CCCTGCTGAACACATGACCTGACATCAGTCTCACCATTTTATATCTTGTTTTCTTTTCTA
TTTAGTATGATGCACAAAACGGATGTTTTCTCTAATAAAACTTTGCCTACATACTAAGAA
ATCACTGGCCTTTGTCTTTACAGCTACATTCACTTGCTCAGGCAGTGCAGGTTTTGGTTT
AACCACAAAGCTGCAAAAATACTTTTATCCCAAAAAAACAACAATAAATGTGACACCTGT
GATGAAGACGGGCAACAGGTCGGGCATGTCTGACGATAAAGTGTCTAATAGCAACAGACA
CCTTAAGACATCATTGCAAAAACACTTGTTTTCAGAACCAGTAAGTTTAATTTGCTCTAA
TAATTACTTTCTTGCAACAAACAGTCACGATTAATCAAGGAAGTTCTGGGAGAGTTCAAA
TCAATCAAATCAAAGATGTGGCAACTGCTAATGGCTTTCTCTACATAGTATAAAAAGCAA
TGGGGTGTGGTTACCTGAAGTCTTAGAATCATAATGTAACGTTTTTCTATAAAAGGAGTA
TAAAAAAATACAATGTACCACTTAGGCGGCTCTACTGAAATCCCTCCTTGGAGCTAATCT
ATCCATCATCTTTATAGGACATCTTTATAGTAAGGGGCCCATCTGTCTCACAATTCGAAG
AGATTTGTGTATCATGTTTTAGTAGTGTTTTTTTAATATACAGTACAGACCAAACGTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTCTGTACTGTATATATACA
AATTGTGACACTGACTCTTTTGTAGTTCACGAAGAATAACAAATGACCAAAAATAACTAA
ATAGTTGTTGTTTTTTAAAGAGCATCAGTGTGCACTCACTGATTGCAGTTTTCTGGTCGA
TCGCTGATTACCGATCTTTAAAAAGCCTGATCTGCCGATTAAAATTCTGGCCAACGCCAA
TTTCTTTTTCTTTTTTTGTTTGAAATGTTGCCGAGCAACAATGTGGTGACTATTGCTGAC
CGCGTAAGCTTGCAGACGTGACCCGGTGGATGGGTCTGTCAGTCAAACCTCTCTCATGGG
AGAGCAGAAGATTTTTAGACCTTTGCTGAGGTAGATAAAATCTGCTTCACATGTAAGTAT
CGGCCGATCACCAATCTCCCAAAATTAAGGAAATCGGCACTCTTTAGATTTTGCAGAAAA
ATGATTGAAAATCGTTCATTTTACCTCCACGTTTTCTGCTTCACGTAGCTTTTCAAGGTA
ACAACACACACGCCGCTTTGAGCAACTTACCCGCAGTTGTGCAAGCGTATCCTTAACAGA
GGTGTCTGACGTCTGGTTACAGTCCGGCAGACGGCTGCCTCATGTTCGGGTCAGCAGCAG
CGCTGACACCCGGTGTTTGCTAAGCTAATGTCTCCCCCGTGAATCCTCACGTTGGTCACA
CTCTAACAATGGCCCTCGCCTTATCGCTTCTTCCTCCTGAAAACCCTCTTGAGACAAACC
TTGTTGTGAAACAAACCTCCTCACAACCTCAGGCTGCAGAGGAACATGTGTAGCTTGTAC
CGTGGCGGATGAAGGTTGAAGACAGAAAGCAGAGCGCTGAACTACGACCGGCTGTCACGT
GACGTCAGCGCGCAGATCACGTGATCAAAGTTTGTCTGTCAGAGCAGAACAGAGAACCGC
AGTTTTAATTGCGGCTTTAAATTCGTATTTTCCAGAAATTGTCCTCGTCACATTTTTACT
TTTAAAAATAGATTTTTTTTATTTTTATTTTTTTAGAAATAGATTCGTGTTTTGACCCAT
TATCTGTAATGAAAACGTCGCATTTTAAAACAAGAAAACTACACTAAGAACAAGAGATGG
GACAGTGGTCAGTCATGGTAAAAACTATCTAAATCCTATGATGAAATTACATAAACACAA
ATTTATTAGTCCGAAGGTCTTGACAGCATTTCAAATTTGAAACCTGGATATTGACCGGGC
TATTTCAGAGTTAGCTGTCAGGCTGCTTTATATTATTTTAGAATACTTTGGTTGTACAAG
GGACTTAGTGGACTCAGGCTGCAAGATGCCCAGGTTCTGTGGCTGAAAAACAAGACAGAA
TCATCACCCTTTCACCAGTGTTTCAACACTAAGAGCATTTGGCTGTCTGTGTTGAAACAC
TGATTTAGTCCTTTAAATCAAGACTAAAACCTTATTTAGAGTTGACTTCAATTAATAGTA
ACTGGAGCATCATAAATTGTAGTCAGTTATTGAACATTTCATCACTTTGCTTTATTTTGC
CGCTGTTGTTTGTTGTTGTTTTTTTTCTCATTGTGTAAAGCACTTTAAATTGCCCTGTTA
CTAAAATGTCCTGTACAAATCAACCTGGTTTCTCATTGCACTGGAAAGTGTGGCCAAACT
GATCTAATTTGCGAAGAAAAAAGTACAAGATTCCCAAAGTCTTGTTGTTCATTCAGATAC
AACTTTGCAAAGGTTGTGCAGCCATGTTAAATTTAGAGAAAAGATTCTCTTGACAACTCT
TCTGTTCTTTTTCTGGTTAACATTGAACATGCCATCTCTGGATATTTCAGTATTCTCTTT
CTGTTTCACACATCCAGTTAAAAAAAAATATATATATATATATATATATATTCACTTTTG
ATAGATTGATACGATATCAATCTTTTAGTTCCTTAACAACATCTACAATTGTCAAATAAC
AGGTCATAACACACCAATGGATTCACATTCATCTTTTAATGTCAGTTTCAGACCAACCAC
TCATAATAATCATTTAGCCTTTTAAAATTGAACATTTAAATCCCTACCTATTGTACAAAT
CTATTCTAAGCAACAATGTTTTTTATTATTCAGCAGAGAATTGTACCTATTATTCCAAGA
ATTGTTTAGTAAAAGTAAACATTTGTACCCACAAATATGTGCTTACAAGCCTAAAAGAGC
GAAGAACATCAATACAGTTTGTTTATTTTGATGTAACAGCAGGATTTTACTGTTGTGGTT
GGTTGAACGCTAATTTATTTCGAGTAATTTGTTTAATGATGCGATTGTTTCCTCCACTGA
ATAGTCTATTGTCTTATTCACAAAAGTCTGAAATCAACCCTACATGTAAATTCGACCACA
AATACAGAAATCTTTCAAATATACTTAAACATTTCTGTCTGATGAGGAGGCAAAAAAGTT
TCACATGCACATTTTTTGAAAAAAACATTAAAGGTGCACAGCAATTTAACCCTTATGCCT
CCAAAAAACACACACACACACAAAAACAACGAATGCTGTATACAAGAATACCATATAAAA
CAACACAAAATACAATGCCACAAAAAATACTTGGAATCTATTAGGGTCACATACTCTATT
AGATTCAAAAGCCCAAACAAAAGGACTTTAACAGAGACTTAAACATGAAATAACTCATAG
TGACAGTGGGTAATTGATAGCATCAACTTGGTAACTTTGCATCAATTCTGTTTACCAAGC
ATGCATGTGGTGACTCTGGAAAGGAAAACTCCCTTTCAAAACGAAGAAAACTCCAGCAGA
ACCTGCTTCGAAGTGGAAGATTGACAAGACAAAGCAGACATACAAAGTCACAGAAGCAAA
GACCCAGGAGGATCCTGTTTAAAAACAATCTGATGAGTTAATGGCAGCAGTGGTTCCTTC
GGGGTTTTCATCTATTAGGAAAACATGTAATTTGAGCTTTGATTCAATAGTAAAATCCAT
TGAAACAAAAGGCTCAGCATACAGTATATCAGGTAACCTTTAGCACATGTTAGCCCTATT
TCATCATTTTGACATTTTAATTGGGTCTAAATTTCATATTTTGCCTAAGCAAGAAAAAAA
ATTATTATTATTTTATAGCTTTCAGTGTGCCACTCTAAGGTTAACACTCTCTGGTACCAG
AAATAAATAAATAAAAGAACAATAACAACAACAAAAAACAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAAGATAAGATTTTAGGTTAAGATAAAGTAAAAAAAAAAAAAAAAGTTGCTAC
CTCTTATTATCTTGAACTGGCAGATAGAAACAAATGACTTTATTCTGTGATATGTTGACA
TTACACTTAGAGACAGATAG
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