SelenoDB
Release 2.0
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Promoter Report for SPR00003414_2.0
Identity
PromoterSECIS binding protein 2 (SBP2)
SpeciesIctalurus punctatus (Channel catfish)
Promoter IDSPR00003414
Promoter release2.0
External IDNone
Transcript SPT00003347_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00003414_2.0 # Promoter # SECIS binding protein 2 (SBP2) # Channel catfish (Ictalurus punctatus) Full length # Reverse
TCCTGCCGAAACAGACGACGGTGACGAACCGGACATGGCTAGCTCTCGCCTGTTAGTCGC
CTCTCATTCACACGGCAAAATAACGAAACGGCGTGGACTAACAAATGTCGTTTCCTACAA
GGAAGTGAATATGGATGATGTAAAAACGGTTGCAGCATATTGGCTGTTGTGTATAAGCTT
GTATTCCAAATGGCCTTTTATATGGAACTTAGTTTACTACAAAGGGCGTACAAACCATTA
TTTAAAACCCTATGTAGAGTACTTATCTAGGGAGTAAGTAGCCATTTGGGATTGAATCAG
AAACCATTTTGGGTCGATACCATTTCAAGCCTGAGACAGGTAGTTAACATGCGATTGCGG
TTTTTTAAATTAGCAAACAATGTATTCAGCACAAGTGGTTTTTTCCTTGTTAGCGAAACT
CGTCGGAAAAACCCACTTGACAAAATAACATCAGACAAAACAGAACATAATTGGTACATG
TTTGAACATGTTTGATATTGCCCCACCCTCTCATCTTTTTTCAAAATGGTATGGTCCATC
TATTTCGGACGCCATACCACTTGCCAGTTGGACCGAGGGAGAAGAAAATAAACCCAGCAA
AAAAAGAAAAGAAAAAAAGAAGAAGAAGAAACGTGCCTTTTCAGGAGACTGTATTTTAAA
TATAATTCTGTAAAAACCCTAATAACTTTACAGCTCTTTATTGGAAAGGGTTTAAACGAT
GTTTTCATGCTTATTCAATGAACCATAAACAATTATTGCACATGCACCTGTAGAACAGTC
CTTAAGACAAGAATAGTTTACAATCGGTAGGCAATTAAGGTCACAGTTACAATAACTTAG
GACACTAAAGAGACCTTTCTACTGACTCCAAAAAACACCAGAAGAAAGATGCCTAGGGTT
CCTGCTCACCTCCGTGAACATGCCATAGACCTGCTGCAGGGAGGCATGAGGACTGCAGAT
GTGGCCAGACAAATAAACTGCAATGTAAGATGCCTAAGACAGTGCTACAGGGAGACAGGA
AGGACAGATGGTCGTCCTTGCAGTGTCAAACCACCTGTAACAACACCTGCTCAGGAGCAT
ACATCCGAATGTCACACCTGATGGACAGGTACAGGATGGCAGCAACAACTGCCCGAGTTA
CACCAGGAACTCCATCAGTGCTCGGACTGTCCTCAATAGGCATGTAGGCCTGTTGTAAGG
CAGGTCCTTACCAGTCATCACTGGCAACAATGTCACCTATGGGCACAAACCCACCTTTGC
TGGACCAGACAGGACTGGTGAAAAGTGCTCTTCATTGACAAGTTGTGGTTTTGTCTCACC
AGGGGTGATGGTCAGACTCACGTTTATTACGGAAGGAACGCAAGTTACACCGAAGCCTGT
ACTCTGGAGCAGGATCGATTTGGAGGTGGAGGATCCGTCATGGTCTGGGGTGGTGTGTCA
CAACATCATCGCACTGAGCTTGTTGTCATTGCAGGTAATCTCAACGCTGTGTGTTACTGG
GAAGATATCCTCCTCCCTCATGTGATACCCTTCCTGCAGGCTCATCCTGACATGACCCTC
CAGCATGACAATGCCAGCAGCCATATGACTCGTACTGTAAGAGAGTAATATCAGTGTTAT
GCCATGGCCAGGGAAGAGCCCAGATCTCAATCCTATTGAGCACGTCTGGGACCTGTTGTA
TTGGAGGGCTAGGGTTATTCCTCCTAGGAATGTCCAGGAACTTGCAAATGCCTTGGTGGA
AAAGTGGAGTAACATTTCACAGCAAGAACTGACAAATCTGGTGCGGTCCATGAGGATGAG
ATGCAGTGTAGTACTTAAAGCAGCTGGAGGCCACCACATACTGACTGTTACTTTTAATAT
TGACCCCCCCCCCTTTGTTCAGGGACTCATTTTTCCATTTCTGTTCTTCTAATGTCTGTG
AAACTTTTTCAGTTTATGTCTCGGTTGTTGAATCTGTATGTTAATACAAGTATTTACACA
TGTTAAAATATTTGCTGGAAATAAAAGCAGTTGAACATGAGTTTACATAAAGCTTTATTA
CTTTATAATCTAAAATATGCAGGACTGCTTTCAAGGTTGTGGTCATGTGCAGGAGAAAAA
ATAATTCTGACTGTTAAAAATGTTTCTTTTTATTCAATGAATTTCATTGACAAGCAGACA
TTCCAAAAGCCAGAATGTGTCCTCAGTACATTTAGTACACATCTAATAACACAGGTTATT
ACTCAGGCTTCTCCCAACTACATCATTAAAAAAAAAAAAATTCTCCTGGCTGGAACAAAT
TACTTATAAAACTTAAGACGTGAGCACTTGCTGGTACAAGAAATGCTTAAAACCTGGTTA
TAAAGTATGTTTACATTACTGAGTTGCTTTTTCACAATTTTTGCACTTGAGATATTTATG
CCTGAATTGAACTTTTGGTGCTGTAAGCAAAATAGTACAGAACAATGCCGATGACAGCTG
CTAAGATCTCGGAGGACACCCAAGGACCGTTCCATGCACCCTGAAATACACATGAAGCAG
AGTTTGAATTGAAAGACATCTTTCAAATGTCAATACAACTACACTTGTGGTACTTTGTGT
CTTCAAATGAGGTACATTACTCACCCTGTGCTCTACATTGACAGAAAACAGAGGCTTGAT
GGCTTCTACATCTTCATTATTTCTCTGGGCCTGAAATAATACAAAATGGTTGTCATAAGC
ACTATTTATGCAAATGGTGGCCTTGTACATTTTCTTAGCAATTCTTTCTAGCATAGCAAA
ACACTTTCATACGTCACATATTGAAAATAAAGATTCAAATCATTTTGCCACACCTTCCGC
AGGGTGCTGTAAGCCTCCTCATCAAAGAACTTCACTTGATGAGTGCCTGAGCTGGCTTGG
TTGTGGGGAACACTCCAGGAAACCTGCGAGAAAACAGTCAGGTGAACTGTATGTGCATCA
GGCAACAGTCATGTTTAAATGGGTTTAATGTGAACATAAATATGGTATTATGTACCTGAT
ATTTTCCAACATCCTGACCTCTGGTCACAGGAAACTGTTTGCCATTAACATCTGCGTAGA
GGGCAACACTCTAGTAGCGAGAGAGAGAGAGAGAGAGAAAGCGAGACCATGAATGAAGTG
TTTGCTTAGGCAATGTTGACTATATGGTGTCCCAAAAGTCTCCATATATAGGGGAAATTA
AAAAATTTTAGCGAAACATCTTCCAAAATGTTTCATACTTAAGTCTATTTTATATATTGT
ATATTCTTTTTTTCAGATATCCTTTAAGCATGCCTTTGACAAAACAATGTATTGAAATCA
TTCTCACGACTGGATCGGGATTCTGTCGCAAGGTTGTGATGGACTAACAGGAAACAAGGC
AAGCAAATCTCACAAGACATTGTTGCCAAACTTATTAACAAATTCAAAAGGACGAAGTGT
CACAGACCAACCAAGAAGTCGACGTCCACGAACATCCACTGATGAAGGCACAACGGATGT
GGTGCGGGTAAACATAATCCCCTAAATATGGAGACTTTTGATACACCATGTATAATATTT
AACCTATGATTTTCTGGACAACACTTCATGTAAGCAGATTTAATGCACTTGGAAGTAAAA
AGGTACAATAGGAGATTTTTAAAATTTATTTATTCCTTACTCATACAAATAATCTGGATA
TGAAGAACATGGTTCTTCATATACAAAAAAAAAACAAAACAAAAAACAGTGGGTTCAGCA
AAAGTGTATTAAGTTGCTGAGAAAACACGATTGGAAAATGCTTGTTTATGTTTGGGATGC
ACCTCCTGTCAGTCATTTGACAGACACTCTACAGGCCACCATAGAACCTGAGGGGAAGAA
CTTCATGAACATAAGAGAAAATCATTCAAATGTCAGCTGGGATTCTCACAATGAAGCCTG
GAAGTGCACTGTTTAAGGCAGTAGTCACCAACCTTCTTCCTTGAGCTCTACTTTCCTGCA
GGTTTNNNNNNNNNNNNNNNNNNNNGGTACGTCTTTCCTTCATCATAACACGTCGACTCA
TCTGCAAACGCAAAGGACAAGCGTTCCTGAACTTCTCTTTTGATTCACATGACTGTATTA
TTAATGGTGCAGTAATACATTTTTTTTCAAAATCCTTTACAAATAACCTGGATTTGTGAT
ATGTAGACCATGCTAAATAATAACACAATAAGCAATAAATGGTCTTAGCAAAAGTGTATT
AAGTTGCTGAGAAAACACGATTGGAAAATGCTTGTTTATGTTTGGGATGCACCTCCTGTC
AGTCATTTGACAGACACTCTACAGGCCACCATAGAACCTGAGGGGAAGAACTTCATGAAC
ATAAGAGAAAATCATTCAAATGTCAGCTGGGATTCTCACAATGAAGCCTGGAAGTGCACT
GTTTAAGGCAGTAGTCACCAACCTTCTTCCTTGAGCTCTACTTTCCTGCAGGTTTCATCT
ACAACCAAAATCTATCACCCAACTTCTACTGCCAATGATTAGATGGTCAGGTGGACACAA
TTATGGTTGGCACTAAAGCCTTCAGGAGGGGAGATCTCCAGGAAAAGGGTTGGTAACCAC
TGGTTTAAGGAAACCTAATATTATAAACAAATTGGAGAAATGTTTGTTTAGGGGTGCGTG
GTGCAGTGGTGGCTTGACAGTTAAGGCTCTGGGTTACTGATCAGAAGGTCGGGGGTTCAG
GCCCCAGCACCGCCAATCTGCCACTGTTGGGCCCTTTAGCAAGGCCCTTAACGCTCTCTG
CTCCAGGGACGCCATATCAAGGCTGACCCTGCGCTCTGACTTAAATCTCCTGTGTATATG
TGACCAACAAAGACTCATTATTAATACTGTAAACCAAATTCAGATGAATTGTTAACTCCT
AGTCATGTGTACAGCTGTTTTCAACATGGTGAAGCTTTTTACCTGTGCTCCATTTCCACA
TGCCAGGCTCAGCTCAACAATGAAGACGGTCTCAGAGGAGATCACTGCATCAGCTGTTGT
GTATGAAGAGGTGGAGATCA
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