SelenoDB
Release 2.0
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Promoter Report for SPR00003535_2.0
Identity
PromoterGlutathione peroxidase (GPx)
SpeciesNeotoma lepida (Desert woodrat)
Promoter IDSPR00003535
Promoter release2.0
External IDNone
Transcript SPT00003468_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00003535_2.0 # Promoter # Glutathione peroxidase (GPx) # Desert woodrat (Neotoma lepida) Full length # Reverse
AAGGCCTTCTATTTCCTTGAGTCTCTGCTTCATTTCCTTGGTTTTGAGACAGTGTCACCC
TGTAGCTTAGGCTAGGTGAAGTCACAGTAATTCTCCTGCCTCAGTTCCCTGAGTACTAGG
ATTACAGGCATGAGCCATCATAGCTGGCAATCTTTGCTACTTTTTTTTTAAACTTTGGTA
TCTCAGACTCTCTGTGGCCTGAATGTCCCTGTCANCTGCTTCCATCCCAGTGACTGCCTA
CTAGTGCCTCTCTGCACCCACAGAACACAGAAGTGTCCTCTAGTCCTTCTTTCTATCTCA
GGAGCTTTATGGTCATCCTGCGTTTCACTTAATTTGCTTTTGCCTACAAGATGTATGTCC
TAGTTAGGGTTTGGATTGCTGTGATAAAACACCATGGCCAAAAGCAACTTGGGGAGGAAA
GGCTTTATTTCAGCTTACACCTGTCATGTCACACTCATCAGTAAGGAAAGTCAGGGCAGC
AGCTTGAGGCAGGAGTTGATGCAGAGGCTGTGGAGGAGTGATGGAGGAGTGATGTTTACT
TGCTTACTCCCCATGGCTTGCGCAGACTGCTTTCTTATAGAANCCAGGATGACATTCTCA
GTGATGGTGCCGCCCACAGTGAACTGGGCCTACCACATCAATCATCAATCAAGAAAATGC
ACCACAGGCTTGTCCACAGACCAATATGATGAAGCCATTTTCTCAATACAGGGTCCTCTT
CCCTGTATANCTTACGTCATCTAGCCAACAAAATATATAAATCTAAGCCAAACCTTTGGC
CTTTAACAATTCTGCTTTTGAATGACTTGGCATNTCTCACTGCTTAAAGCAGGGAAGAAT
TTTAAGACTATGTAGTCCAGCATGCTTATGTTTTCAGGTGTGTGGATGTGCTGTGGGCAC
ATGAGAAATATGATCATTAAAGANTTAAATAGGTTGCCAGGTGGTGGTGCACACCTTTAA
TCCCAGCACTCAAGAGGCAGAGGCAGGCAGACCTCTGCGTTCAAGGCCAGTCTGGTCTAC
AGAACAAGTTCCAGGACAGTCGGGGCTACACAAAGAAACCCTGTCTCAAAAAACCAAACC
AAACCAAAACAAGACAAGTTAAATAGGTAAAATCACTTTTGGGAATTATTAGTATTTTTT
AAGAAAGTTAAACTCATATAATCAATGACTCAACAATCCCAATATTTACCCATGAAAAAA
GAAAACATGTTTACAAAAAANCTTGAGTAAGAATGTTCATACAAGTCTTACACACAGAAG
TATAAAATGGAAATAAAACAAATACCTAGCATCAGGAGAATGAATAAACACATTGTCATA
TGTATATGTCATATGTACATGTATATGTCGTATGTATCATTGTTGACCATCATGTGACAC
TTCAGTGTTTGATTGAATTGTTTCATGCTTTGGGTGTTTTTGCTTAAGAATCAGCAACAT
TGAGATAATTAAGGATATTTGAACCTAAGTTGCATCCTAAATAACATTAAATAATTGTTG
TTGGTTTTGCTGGTGATGTTGTAGTTATGGGAGAAAATAGAGAAACACGAAGCTATTTTG
GGGAGAGAGCAAAATAAGAGATGAAGAGGGAGGAGGAAGGAGACACTGACATCTTGATGG
GGAAGACACGTAAGACCATGATACAATGTGCCTGCTTTGGGATAAGTTTGAAAAATCTTC
ATTTAAAAGTGGTTTATTGTAGGGGCTGAAGAGATGGCTCAGTGGGTAAGAGTACCTGCT
CTGCCAGTGTGGTGGCCTGAGTCTGAATTCCCAGCACCAGGCATGGCTGCATATGGTTAT
AGCTCCAGTATTGGGAGATANCGACAAGCAGACCCCAAGAGTCCACTGGCNNNTCAGAGA
GCCTAGCTGAAACGGGAGCTCCAGGTTCCGTGGGACAAACTTTTGCTATCGTATTAAGGG
GCAAATTTTTGTTTTTCTTGAGATTAGTCATTTTGAGTCAGGCAATGAGTCACTGAGCAT
GGATTCTAAATGTTTGCATAGACTACTACAAGTCACTCGATCAGGTTACGGCCAGTCAGA
ATGACAGGCATAAGGATTTTTGCCTTTACTTTTATCTCTACAATACGGTTTTNAAAAAGG
TCAGGAAGTATTTGGTGTGATGGCACACATGCCTGTAATCANGTGCTGGCGAGGCTGGGG
CAGGAGGATGTGAGTTCGAGGCCAACCTCAGATACTTGATGCGAGCATGTCTACAAGTAT
ATTAGAAAATGTTTAGTCTTTGTTCCTTTTCCTAGTACAAAGGTCCAAAAGCCCTCTGAA
TTGCTTGAGTGACAGGTATGCCTTTTATTTGCTAATGAGATGACACAAATGTCTCTTCAA
AATGGGTGCTAGTTGCTAGAACAATCAAGGCATGATTGCTAGAAGCTTGATGCTGTCTCT
GCCATCTTCTGAGGAGGGAATGTACTTGAGATCTACTTCAATCCTCAATGACCAATGTAA
TTAGTAATTTAATTAGTAACGTAGAATGCCCTAAACAACAGGGCATAGAGAGCTTCTGAG
GTGGTGAATTCTTAGAGTGCTGAGAAAAGTGTGCACACACAAAAAGACATTGCTGCTTGC
ATCTACCTACCTCATATCCTGCCCTACACATTCCATTCATTTGGCTGCTCCTCTGTTGCA
TCTTTTATAGTAACCCAATAAATGTGAATAAAGTGTCTTCTTGAGTTTTGAGTTATTCAA
AGGGAGCATTGATGCTGTTGAGGATATTATAGGAACCCAAAATTTATTGCTGTTTGATCA
CAAATACAGGCGGTCCTTTTGGGTCTTGGGACTAGCTCCTAAAGCAGGAAAACCTTGAGG
CAACAAACCTTTAGTCTATAAGANCTGAAAGAAAAACAAACAAACAAATGAAAACTAAGT
TGGTGTTTGCTGACTCACATACCCCTCTCAGCTACAAGAGACCTTTAAATCAGGACTTCA
TTGAAGAGAGCTCAGAAAGCAGTGTTCCCATTTGATTGCTCTTAGTCTTTGTTGGAGCCA
AGTCTGTGGCCTCTCTGGACCACGTAGGGGATGAGTAAAAGAGAAAGACATAAGCTAGGA
AGGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGCATGTGGCGG
CAGGACACAAAGACTGTTGTAGTCTCTGGAACCTGTAAATGTTCTTATAGGGGAACTATT
TTTGCAAAAGGGATTAAGATAAGGATTTTGAGATGGAGGATTACTCTGGATTATCTAGAT
TATCCCTAAATGCAGCCACTCACATCCTTCAGGGAGGCAGAGGGACATTTTACTACATAA
GCCTGGAGAGGAGCAGGCAATGAGGGCTATCCTATGCTCATTTTCACAGTATGCATCCCT
TCCAGTGCTTTTCAGTCCTTTCTACATAGCCATTCTAATAGGTATGAAATGGTGCCTCAC
TGTGGTTTTAATTTGAAATTAGATGTTGATCAGTCATGTCGATTTTTTTCATACACTGTT
GGTCACTTATATCTTCTCTCTATCTCTTTTTCTTTTAAAGACAAGGTCTCTGAAGGTAGC
CCAGGATGGCTTCAAACTCAACAATCCTTCTGCCTCAATCTCTCTCTTCTGTCACTAGCT
ACTAGAACTATTTCCTGAAGCAGATGAAGGTAGGATCTCTGGTAATAATGACAGAATCTC
AGGAGGACTTTAAGTTGGGGCCAGTGGTCATCATGGAAGCTCAGGATTAGAGCCACAGCC
AGCCTGAATCTGAGTTTTCCTCAAGCATTAGGCAGTACAAGGCAGAACATGCACAAAAAT
GTAAATAAAAGAAAANTACAGCAAATATATCAGTGTTAAGCCAGGTTGTGGCTCATGCTT
GTAACTCCAGCCCTTGGAGCATTGAAGCAAAGACTTTCCGTGAGCTTTGAGACCAGCCTG
GGCTACATAGTAAGTTGCAATTTATCCAAGGTTACAGAGTAGGATCCTGAAATAAATAAA
TAAATAAATAAATAAATAAATAAATAAATAAACAAACAAACAAACAAACAAATAAATATC
ACTCTTCACATTCTTGATATGTGTAGTTAGTGCATCTGAAGAAGAAAAACAAACAGAAAA
GCATAAGTCAAGTGACCTTTTGTAAGTTTACGCTCACATTTGTAAAGTGGGAAAATACAC
TCACTCTAAGGTTCAGCTATTCTTAACACTGAGACTGGGAGAAGGCTGAAGATCTTGGAG
ATGTGCACGAAGAGGAGTGCCTTCTGCACGACTGCCTCAAGGCCCTGGAGANTGGTTGGC
TGCATGGGGTGTCTGGATCAGATCCTGTACTGTAGAGGAATGCAGAAATCCCAGATAACC
CAAAGGGTGCCTTCTAAGAGTTCACAAGAATTGGAACTCCATCCAGATCCCACTTCGCAG
AGGCATAGAAGGCCCTTTGTGTTAACTTGGAAGGGGCAGGCAGGTGGCAGGGGCTGGATG
ACAGAGGGATTAGAACTGGAAAGCAAGGCTTTCTCATGACCCTAAGCTGGCAGTAAAAAC
CAGGTGGATGGGAGAGAAGAGGAGAGGAAGCAGCCGGGAGATACAATTCTCACCCACTCG
AAAGATTTTGGCACAATAGTCTGGTTGTTATCTTATTAAAACTTCACAAAAACGTATTTT
TAGAATAGGCAAGGCAAAGACTATTGCAAGTATCTGCAGAGGAGGAGACTGAAGCCCACA
CCATTCCTGATTCATGGCCTAAAGCTTTCTCTTTGATAACTTTCCACTATGAATGTGTGC
CCCTCAGTTTGTCCCTCCTCTGTTAAGGAACTTTCCCAGGGGAAAGGCAGAGCTGAATGC
TTAGCATCAAAAGCCTGGCTTCATATTTTACAAACTTGACAATTTTTGTTTGTTTAAGTG
GTGAAGTTTGAAGAGACAGAACAAATGATAGTCATCTTGAGGCAGAGTAAAAAGAATGGG
AAAATTAAGGGGTCATGGGAAGAGAAAGAAACCTCTTTACCTTGGGATCCAGTTTGCCCT
TTCTGCTCTCTGAAAGTCAA
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