SelenoDB
Release 2.0
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Transcript Report for SPT00000515_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesCholoepus hoffmanni (Sloth)
Transcript IDSPT00000515
Transcript release2.0
External IDNone
Gene SPG00000418_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000515_2.0 # Transcript # Selenoprotein O (SelO) # Sloth (Choloepus hoffmanni) # Full length # Forward
CAGGAAGTTCTAGAAGATATTTTGGACCTTGATTTATCTGTCTCAGAAACAGATGACTTT
ATCCAGCTTGTAAGTGGTGAAAAGATAGTATTTGGATCCGTTCCATTGGCTCATAGATAC
GGTGGCCACCAGGTAACAGAAGCATTACTTTCCTCATGCAGTGTAAATATTTGATGAAAT
TGCTGTCCTATTAAAGAGGTTATTTTGCATTAATTTCTCTAATATTAGCATACTGAGACT
TCAACAAGATGTTTGTAGAATCTGATGTGTCATCCTAAAACATTTATAGATTAGCTGATG
TGATTTCTTGCCGCAATAATGCTAGAGCCCGAGATTTTTTAATGGAGTTGAGAAACCTGG
AGCAGCACAAGTATAAAATTTCTGTGAATTATGACTGGAAAACTCATTCATTGAGGACTG
AGGCAAGCAATTTAGGCAAAAAAAAAAAAAAAAATAGTAAAGTTTATTAAAGAAAAAGAG
AAAGAAGACACAAAGAGATAATGTGGGCACACAAAGAGATAAAGTGGGCATGTTCCAGGG
AGAAGCATGCACCAAGTGGGAGTGGGTTGGCTTGTTATATAAGAACATTTTTCAGAGATT
TCCTTATCTTGCCTTTGAACACCAGATGTCTTCTTTGTTTTAGGAGATAGTTATCACAGT
GATCAGAACTTGTGAGCTGCCCTCGCATATCTAAATTTGTCTTTGGGCAGATGCTCAACA
ACAAAATCAAGTAGTTCTTGAGGAACAAATAGATGTTAATGTCGCCAGGGTTGCTTTAGA
GCAAAGTAGCCCTGCTAGAGAGGCAATAAATCAGGATTCAGTGGGAGTATGACAGATGCT
GTAGCAATCAGGAAACGGGAATGCAGGGTCAATTGAAATTGCTGTTAAAATCCTGTGAGC
TAAATAAGATTATTTTAACACCGCCTGGTTGTTTGGGGGACTGTTTTGGTTTGAGCAAGA
ATTAGTTTTGAAAGGAAAAGTGGTAAAATAAAATAGAGTTGATGTAAGGATTACCTTAGA
ATGAAAAGTACATAACATGTTAGATAATCATCATCAATCTCAGGATCTCGTTTGTTGGCT
GAGTTGATTCCTTTCAGATTTTTATTGCTTTCATGCTTCAAAGTCGTGTGGGCAAAGAAA
TCTGCTTAATTTTTTTTAACACACCATTTTCCACACATTTTGACCACTGACTTGTTTTGT
TTTTAAGGAATAACTCTCAATGTTTTGAGGAACAATGTGTCTCAGTTTAGAAATGTCTGG
ACCATTTGATCCTTATGGTTTGTTCTTACCTCCCAAATGCAGGGATTACATATTTCAAAA
AGCCATCACTGATATGGGTCAAGTGTATTCAGAACATTTTTTGCCACTTCTCACATGTTC
TGTTAAAATACAAACACAGACTTTTAAGGTATGCAGAGTTTTTTGAAGCCATTGCAGGGT
TTTTTTGATTTGGTGGTATGATAAGCCAGGTAAAAGCCTTTATCAATTTTGCGTTTCATC
TCTTGCTTCTTCTCCTTGATCTGAAATTATGTTGTAAATGTTTCTTTATAAGGATGGTGG
TGTCCCTGTGAGCTTGCAGTGCAGTAAATGATTTCTCTTATTGATGGAAAACTAGTTTCC
AACTCCCCCGATTTCACTGCTGTCTCTGAAATCTTTCTACTGTCATTCTTTCTACTGCCC
TCTTGTGCCGAGGGAGGCATCTAAAGTGTTGTCAACTTTGGTAACTCCAGAGAATGCAGG
AGATGCTCTCAGACGTGTGCTCTTAGAAGTGTCCCATTGCTAAGGTGAAATCATTGTGGT
CTTTTTCTAGTTGAGATGAAAATTTAAATACTGGATAGATTTTTCTCAAATTCGTGTTTA
CCTTCCAGAAATTTAAACAACCATGTTTAAACATTTCACACTGTTTGTAGAATTCTTTTT
ATGTGCCAGGTGAGTGAGACCTGCCCCCTTCCCTCAAATTCCAAATACCCTGGAGGAGGA
GATTGGTACCTGAGCAAATTCCACTGTCAGTGGGGTTGTGATGAGTTACGGGAACTCAGG
TGAGTTCCCAGTCCTGGAAAGTCAGGGCAGACATTCTGATGGAATCTCATCTGTGTCAAG
AGTTGAATGATGTCTAGGTTAGCCAATAATTGTTAGCAATAATAATTCCCATCCAGTGTG
CACTTGCCTATGTCGGACAGAGGAAAGCATTGCATGCATTAGCGTTCATTCTTACAACCA
TCTGGCAAGGTTGTCCCATGTCACAGAAATGAAAGCTCTGACTCAGTAAGATTAAGTAAC
ACGAAGTTTGCACAGCTAATAAACAGCATAGCTGGGATTTGGACAACAGCAAACAACTTG
TAATACAAAATTTTGGAAACAATTGATCACACATGTTCAAAAGCAGTTTTTTCAGGTACA
GGTCTGTTTATGATTTTGTATTGCATATGTAGTATATAGGCAAATTTTTCTGCCCAGAAA
TTGTTCCTAGTTTCCTGTTCTGGGGATTAACTAAGTCAGTTCTAGTGTTCTAACACCTAC
AAATATGAGCTCAGCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCTATAAAAATTACTCTAAAAGCTATAAAGACAAACATGA
ATAAATTTTCCTTTTTTCCCTGTAGTTTGGAATATGGGCAGATCAGCTTGGGGATGGAAG
AGCTCACCTTCTTGGAATTCATATGAACAGGTACCACAAGTTTTCTTGCTAATAGCTTCT
CTGTTACTTGTTACCATGAGTTTTCTAATACTTAGTTGTTTCTTTCTTTTTTGAAGGCGG
GGCGAAAAGTGGGAGCTCCAGTTAAAAGGTTCAGGAAAGACCCCCTACTCCCGGTACAAC
TTGAGATTTTTTTTTTAGTCATCTAAATAGAAATTGGTACCTTGTTAGCTGTAAATGAAA
ATGGTTTTTATTTTATTTCCTATAGAAGTGGAGATGGTAGAGCCGTACTTCGTTCCTCAG
TGAGAGAATTTTTGGGCAGTGAGGCTATGTACTACCTTGGGATTCCGACTAGCAGAGCTG
CC
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