SelenoDB
Release 2.0
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Transcript Report for SPT00000540_2.0
Identity
TranscriptIodothyronine deiodinase (DI)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000540
Transcript release2.0
External IDNone
Gene SPG00000443_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000540_2.0 # Transcript # Iodothyronine deiodinase  (DI) # Sea Squirt (Ciona intestinalis) # Full length # Forward
CGCAAAGCAATTACCGGCAAACCAGCTCCCAATGTAAGAGTTCATGACCTTGAAGATACA
TCACGTGAATGTCGTATCATGGATTTCATGAAAGGCAACAGGCCACTCGTGATTAACTTT
GGTTCATGCTCGTGACCACCGTTCATGGAGAAGGTGAATAAGTTTGACCATTAAAAAGTG
TTCTATTCGAGTTATTAGTGCAGTAAGGTATATAGATAATGTGCCCAACAGGATATTTTT
TAGCGAAGCTCAGTTTTTGGACTATAAATGTATGTACAAAAGCCAGAGTAACGAAGCATT
GCAAAACGGTTTAATCTTTTCTTGTGGCAGAGGATGACAATGTTTTTAAAAAGTATCTAC
AACAATTTTTGGGAGATAAGACTAGCTTTACTTTAATAAAAAGAATATAGTAGGGCGGGG
GAGGATGGGACAACTTTTCATTCTATTTTCTCGTTATATTTGGTGGCAAAAAAAAACAGT
TAAACAATGTTAAACCTGCATTCCCTGACTCCCTTAGACCGTTGTTAATTGTTTAAAACA
CAATCAGCATATTTAAACATTGTGCTGAAGGTGTCTCGGCTTTTCCCACCCTACTACATG
ATATTTTACAGATCGATCATTTCAAAAAGATAGTGCGGAAATATTCTAAAGAAAAGGTCG
ATTTTGTTGTCATTTATATTGCGGAAGCTCATCCGACTGATGGCTGGAGTTTCGCTGGTA
ATAAATATCAAATACACAGTCACGGTTCGCTGGAGGATCGTGTGTGTGCTGCCAAATTGT
TTGCTGAACAAACAGCAGTGAGCTGCCCTATACTGGTTGATAACATGGCGAATGAAACAG
CTTTAAAATACGCAGCTATACCAGAGAGATTGTACATTCTACAGAACGGGATCGTAAAAT
ACGACGGTGCTATTGGCCCCTTCGGTTATAATCTTCAAGAAATGGAAGAAAACCTAAAAA
AG
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