SelenoDB
Release 2.0
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Transcript Report for SPT00000555_2.0
Identity
TranscriptSelenoprotein L (SelL)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000555
Transcript release2.0
External IDNone
Gene SPG00000459_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000555_2.0 # Transcript # Selenoprotein L (SelL) # Sea Squirt (Ciona intestinalis) # Full length # Forward
ATGACTGCACATTTGATTGACAGTATCAATGTGTTTGTTCAAACAGGATACAATGCTAAA
AAGAAAGCTGAAAACATCATGAAAGGTGCATCATATGTTAAACATTAAAAAGTTTTGTAA
CAAAATAGTGACGCTTTACATAGTTTAGGATTGAGACATTTTTCATATGCTATAGTTGTA
CATTTTGCAATTTATTTTTAGTTTTTAAAATAAAGCCTTTAACCATTATTTATCTGACAC
GGTGACATTTGGTATTAATCCACATAGACAACCAAGCAGTCAAGCATATCAAATCACCAT
GGAGCAGTAATTTAAATTAAATTGACCTAATAATTACTTATACATATATTTACATAGTAA
AAAACTAAAAATACAATTTAAGACTATTGTGTTATTACTCATAGCCCAACTAAGAGAGAC
TGGGCATTGATTCTAACTAAGTAAACTGTGGTTTAAAAGCACTTAGCTCATAAAAAAAAC
ATACTTAAAAAAGTCCTATAGTTTTTGTCTTGTTTAGATGTTGGGGTGAAACAATTTGTT
GAAACCAAGCTTGGCTCTTTGCTTGGTTTAATATCTGCGTATGAAAACCTGTTCTGTGAA
ACTAAATCTTGCAACAGAGCTGCATTAGATAAAACATTACAAGTGTTATATCGGCAACAG
AGTGCTGGGAATGAAGCTGTGGAAAGTTTACTCACCTTTGAGGTAAGTATTGTCTGGCAG
TGTGGCACAGTTGGTTAGCACAGATGCCTTTAACCTAGAGAAACGAATTTAAGGCTCATT
AATGCTACAACTGTGAGCATATGTGTCCTTGTACAAGACAATTAGTGGCAATTGCGGCAA
TATATTAAAAATAAACGCTTAGTTCTGTTCAAATGAAGTACCCATGTTAAATTTTGATTT
GTTTCAAACACTTTTAATTCAAAAGTTCATTAGATGTATTTTTTTACAGGAAGATTGGGA
TAAGTTATTAGAAGAAATTGATCAATCTATGTTTGGTGAAATAAGCACCCCAACATTAGC
AGTTGGAGACAAGATTCCTGATGACATAACTCTGATTAATGCAAGGACTAAAGACACTGA
GGCATTTGATGGTAACCTGCTTTTTTCAAGCAACCATAGAAACTGTCTTGTCATTCTTTT
GCGACACTTTGCATGACTGCCATGACGAAAACATGTGACAGAAATACAAGAAAAACAAGT
AAGTAATCTATGACTCCAAAAAACTAAACTACAAACCGCAGCATGTGACTCTGACATTTT
AACTCTGGTCATGTTATAGCCTACCCAAATAGTTAGTAGTTATTATCCCATTTATATTAA
AAATTTATAACAAAAACTAAAACCCATTCATTTAAATTCTTATTTTAGGATGAATTTAGT
CAATTGAAATGTTCCATAATCCTTGTTTCCTTTGGGGAAGAAGCTGGTGCTGATCTGTGG
TTGAAAGAAACAAAGTTTTCATTTCCAATGTACCTGGATAAACAAAGAAAAATTTATTCT
GCGCTTGGTCTTGGCCGCTCTGTTGCAAAGGTAGGGCAGTATTTTGTGTTTAAGATTACA
CTAAATTTATAATATTTATTGGTACAGGTGTATAACTGCAATGCACTATCATTGTATGGA
CTTGCAAAGGCAACATTTGAAGAGATTCCAAAACAATATAAAGATATTCATGATGACCCT
CAACAGGTAGGCTATACATAAGTTTTTTTTATTAATGTGCTTTTAAGAATCACTTTTGTG
GTCAATAAATCAAGCACCTTTTGTAATTTTATGACCTGTATAAATAGGTTGTGTAACAAA
ACGATTTAAATGTCTGCCAGAAACATAGATGATAGGACACTCATATTTTAAACACGTAAA
GTTACATATGTGACTTTATGAAACAAAACACTGTTATAACCATTATCGTTGTCCCACTTC
ATGCGATAAAAAAGTTATGTTCATTTAACTAAATGCATATTACAGCTTGGTGGAGATTTC
ATTGTATCATTGGCAGAAGATAATCAAACAAAGTTTTCTTTTATTCATCGCAGCGTAGAC
TCTGCAGATCGTCCAAAACTTACTGTTTTATTGGATGCTCTGAAAAATATGATGTAATTT
TTTTATTTTTTTATAACTGGTGTGTTTGGTTCGTGTCTAAATGAACATTTTTTTCCAAAG
CGTAAGACGAAGAAAATGTGAAGTGTGACATGAAT
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