SelenoDB
Release 2.0
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Transcript Report for SPT00000557_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesCiona intestinalis (Sea Squirt)
Transcript IDSPT00000557
Transcript release2.0
External IDNone
Gene SPG00000461_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000557_2.0 # Transcript # Selenoprotein O (SelO) # Sea Squirt (Ciona intestinalis) # Full length # Forward
GCAACTATAAAGCAACCAGAAGATCTTCAGTTTGACAATCTTGCTCTGAAGACTCTTCCA
GTTGATGAGTCAAAGGTACCGGGTTCAAGACAGGTCCGGGGCGCTTGTTTTTCACTGACA
GACCCTACACCTCTTGAAAATCCAAAATTAGTCGCTTTTTCTGAGAGCGCTCTTAGGCTT
TTAGACCTAAAATGTAATCCAGACACAGAAGCTAAGTTTTCTGAGTATTTTTGTGGAAAC
AAGCTACTGCCTGGGAGTGTTACAGCGTCACATTGCTACTGTGGGCATCAGTTTGGTTAC
TTTTCCGGCCAGCTAGGCGATGGCGCTGCTATTTACTTAGGAGAAGTAATCAACAGTAAA
GGAGATAGATGGGAGATCCAGTTGAAAGGTGCCGGACAGACCCCTTACTCTAGATCTGCT
GACGGAAGAAAAGTGCTCCGTTCTACTATTAGAGAATTCCTATGCAGCGAAGCAATATTT
CATCTTGGAATTCCTACAACTAGAGCTGGAACTGTTGTTGTTTCCGATGACAAAGTGGTC
CGAGATATGTTCTATGACGGGAAAGCAAAACTCGAAAACTGTGCCGTGGTTTTGAGACTT
GCGCCATCCTTTTTACGGTTTGGTTCCTTTGAAATTTTCAAACCAATAGACCCAGCTACT
GGTAGAGGAGGGCCAAGCACTGGAATGACTGGCATACTACCAACCATGCTTCAATATGCG
CTTGACAATTTTTTCAAAGAAGTTGACCAGGCTCTTCCTAAGGTTGAGCAATACTTAGCC
ATGTATAAAGAAGTGTGTGTTAGGACAGCAGCACTTGTAGCAAAGTGGCAATGTGTGGGA
TTCTGTCATGGCGTTCTAAACACAGATAATATGAGCCTGCTAGGGCTGACTATTGACTAT
GGCCCCTTTGGGTTCATGGACAGATTTGACCCCAATTTCCAGTGCAATAACTCTGACAAC
AAAGGTCGGTATGTATATAAAGCACAACCCGAAATCTGCCAGTGGAACTTGAAAAAGTTT
GCAGAAGCAATACAAGAGTGTCTGCCGTTGAATGACTCACTGAAGGTACTTGAAGAGTCA
TATTTCCCCGAGTACAAGCAACAATATTTATCAGAAATGCGGAAAAAATTGGGACTGGTT
AAGAATCTTCCAGAAGATGAAGCTTTGGTTGATAGCTTTCTTAATACTATGGAAGAAACT
TACGCAGACTTCACAAATTCTTTCCGTAGTCTCAGTGTAGTGTCTTTACCAGGGGTACAA
GACCATGAACCAAGCATTGAAACTACTTTGGGTCTTTTGTTAAAGGACTGTAGCAGTTTA
GAGAGCGTTAAACTGTTCACTAAAAGTGGGTTCACAAGAGACCAGATAGAATCACTGAAA
CAAGTTGCTGAGCAAAATCCTGCTTTCTTATCCATGATAGGGGCAAGTGTTCAAGCTATA
GAGGATGAAGTGCGAAAAATGGACGCTTTTGATAAAATACAAACTCTTTCTGAAGAAGAT
CTGCTGAAGAGTAACAAAGAAAAGTGGCAGAGTTGGCTTAAGAAGTATTGCTCACGACTC
AAAAAAGAAATCACTCTGCAACAAAATTTACAAGTTTTAGATGGGCAGCGAAAACAGCTT
ATGAACAGTATTAACCCAAAATATATCTTGCGAAATTACATTGCGGAAAATGCAATTAAG
AAAGCTGAAAATGGTGACTTTTCTGAGGTGCGTAAAGTTCTTCAAATGCTAGAAAACCCG
TTTCATGACGAGACAGTTCAGCCAGATGAAGTTACTGGTAGATGTGGTTCTGTTGATTAT
AATGCACCGCCACCATTATCAGCTTTGTCTTTAAAAGTTTCCTGATCTTCATAAACCCAG
GTTGCAATACCCTTGAATATCAATGTCTGCAGTGTGGAGTATTCTGTTACTTTTAAATTT
TGTAAATGCATAAGCTATACAGGTGCTCTAAAATTTTTCGTCCTAATTCTTTCTTATATT
GTGTATAAATGTATATGCTGTTGCTGCCAGGTATTATAAGTATAAAAGAGATTTTCTGGT
AATCTTAAACGATTCAATAATGTTTGGTCGAATGGGATGAAATGTCGGTTCTTTAAGATC
ACAAAACAAACGATTTCCAGAAGATCTCTTTCACGCTTATAGTATAATCAAAGATTTGCT
GTATAAACAATTAAACACACTGCTGACATTGATATTTTAAAGGAACACCTGGATTTTCCA
CAATATTGCAAGTTTTTCATATTTTTTACAATCGGTTCTCTTCTGTCTTTACATGGTATA
TGTTTAACATAAATTTACCCACTACCATATCCCTTTAATATAAAAATATGTGCTTACAAT
GGCCTAGAACCATCGTTACTTATTCTATTTAATAGTCAAACAAAGAAAATTCAACATTTT
GTAAGTTCAAATTTACTCTAAACTGAGCTCATTTTTCGAACCATTTTTTTTAACTTTTAT
TCACTTTTTGCTATCGAATGACAGTCAAGGCATTAACTTGTTACAAGCTGCCTTGACTCG
ATAAAATGTTAGTGTT
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