SelenoDB
Release 2.0
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Transcript Report for SPT00000571_2.0
Identity
TranscriptIodothyronine deiodinase (DI)
SpeciesCiona savignyi (Sea Squirt)
Transcript IDSPT00000571
Transcript release2.0
External IDNone
Gene SPG00000475_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000571_2.0 # Transcript # Iodothyronine deiodinase  (DI) # Sea Squirt (Ciona savignyi) # Full length # Forward
GGAAAACCCGTGCCGAACGTTAAGCTTTATTCGCTGGAAGATGACCCACGTGAATGTAAA
ATCATGGATTTCGTGAAAGGCAACCGACCACTCGTGATCAACTTTGGCTCATGCTCGTGA
CCCCCATTTATGGTCGAGGGTTTGTGAAAATGACTAGTTAGGATGTTCATGTTTATCCCC
GTAAATGAAAAAACGCAAGAATTGTTACTACACCAATACTGAGATCACCTCGCTCGCACC
GTCGGGTTACCGGAGCTATTTCATTGTGTTTCGTATGATTGATATGTCTTTTAATTTTGT
ATCATTACAATAATTCCATTTTTAATAACATTAGTATTCTTTGAAAAGACTTTTAAGTAT
CTTACCATCTATATTGGTTTGTTTAAATGGGCTTTCCATATATTTAGGCATCATATGTCA
TTAAATATGCTTGACCTGGTTTATCTTTTTGTTTGTTTAATCTCTTTGCAAGGAAGTCTT
TATTTGCTATCCAACAGGTTGTTAGATTCCCAGTTTTAGAGTTCTTTTAATCAAAAGTTT
GCACTATTGGTCTGATTTTAAATGGTTACTAAATATGAATCAGTCGCCTTCACCATTCGA
CCACATGATCGTTTGGCAACGTTTTCTAAATGCCTCGACCAGAACCCTTGAACTGGAGAT
GCAAAAAGATACCAATGAGCTAGGGACAGAACTAAATTAGAAATGTAATATTAGGATAGG
GATATAGTGAATGGGGAAACCAAGGGGGTTAACACACGGGCAATCGTTAGGTCACCTCGC
GACCACCGTCGGGTTACCTATGCTATTGCAATTTCATGTTTATGATTCACATGATTTTGG
TAGAACTCATTAATTCGCTGGGTTCAGGAAATGTTTGTTAAGTGCCTTGCCCAACCCAAG
GACACAATTGACTTGTTAGCGACCAGTTTAGAACTGAAACCTTTTGGTTGAAAGGCGTCC
TACTAAACCTCCAGACTAACAGGTCGGACTTAGGTAGAGATATTGTGAAATTCTAATTGA
ATGTTCTATTACAGGTAAAGGAGTTCAAACGGCTAATGGAAAAATATTCCAATGAAGTCG
ATTTCCTTGTAATTTACATCCGCGAGGCGCATCCAATAAACGGATGGAGTTTTGCAAACA
ACAAATACCAAATCTACGACCACAAATCTTTGGAAGAACGTATTTCAGCAGCTAGAATCT
TCGCAGACGACGCACAAGTTAAATGCCCGGTTGTCGTTGATAATATGAATGACGAGGCAG
CTGTACAGTATGCAGCACTCCCGGAGAGGTTGTACATTTTGCAAGACAACTTGATTAAAT
ATGACGGTGCCAGAGGTTCTTTTGGATACAATCTTTCCGAAATGGAAGATAGTCTGAAAA
ACTGCTTGCAGAAAGTT
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