SelenoDB
Release 2.0
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Transcript Report for SPT00000583_2.0
Identity
Transcript15 kDa selenoprotein (Sel15)
SpeciesCiona savignyi (Sea Squirt)
Transcript IDSPT00000583
Transcript release2.0
External IDNone
Gene SPG00000487_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000583_2.0 # Transcript # 15 kDa selenoprotein (Sel15) # Sea Squirt (Ciona savignyi) # Full length # Forward
AGCCACGCTGGAGCCGGGTTGTCACCACAAGAATGTTCGGAACTCGGGTTCAGCTCGGAG
TTGATGTGCGGTTCGTGCTCATTGCTTCCCAAGTTCAATCTCACCTCACTTGAGGACAAT
TGCAAGCAGTGTTGTCAGTCAGAAGCTGAAGACGACAATGCCAAGGTAGCGCTAGTTTTT
CAACTATTGTATGGTAAAGCTATAAAACGAGATTTTTTTATGGTTAAACAATAATTAATT
TTACCTACAATAACATTAAACACTACTTACATAGATGCCAATTATTATATTTCTTAAAAA
TTTCAATGAATTATTATGTATTTGGTTGTTTTGAAAATAATGTGTTATATTACGAGTGGA
ACTAAAATTAAAGTTGTTTCTATTGTGGTATTGCTTGGGTTAACTTGGGTTAACTTGAGT
TTCTGTTCTATATCGTTCTTACTACTGTTTGGACCTCTCTGTTGGCCTCCATGTTTAAGA
TCCATGGGATATGAATGGATCAAACCAACATAATATTGCCCAACACATCATCTAACATTC
CAATGATCAATATATTCCTTCAGTACCATGGTGCTATCCTGGAAATATGTGTCTGAGTTT
TATCCAACTATCCCCAAATAGAAGGTAAAGTACCTAAATAGGGTCGGTAGTTAGTGTGTC
ATCTTGGGTGTTGTAGCGATTGGGTGTTTTGTCATTGTACCATGTTGGAATAAGATGTGA
CGGGACCTAGGTGTCATTGGTTCTATGGTGACGGGACCTAGGTGTCATTGGTTCTATGGT
GACTGGACCTAGGTGTCATTGGTTCTATGGTGACGGGTTTTACTGTTTTTCATAGCGATT
CCCCTCAGCGATCTTAGAGGTTTGTGGATGAAAGATTGGACGCTACCCCCAAGTCCAAGG
TTATTGCATGCTCCACCGTGTGGACTTCTGGTTAAATCACCAAAATATGTTTTGAAAAAT
AGTGTAAACTGTATAAAGTCGAACATAAATATTCTTTTTTTTAACCAGACAAACTAATAG
AATTAATGGAAAAATATTTGTTTATATTACCTTAAGTTAGAATTATTTTAATTTTATTTT
AAATTATGGCACTTTTGTTTCCTTATGTTTACACTGGACGCACATATTGCTATCAAACTG
CCATGATCTGAACTACAATTCTGTTTTAAGTGCTTGAACAAATTATTTTAATTGACAATC
AACATACATTCACTTTCAATGTCGATGAGCTTTAATTATGTCCTCCAGTATTACTTGTTA
TTGATTTATCAATATTAGTTTTAAATTTAAACATTGTTTTAGCTTTTGTCAAAGGAGAGA
AATCCAGAGCATTTTCCAACCTAAAAATTAAGGTAAGTTGCGATTGTGATTATCTGCGAG
TTGTATGTGGTGGGTGTGGTTCATGTGGATTCGAAGGGAGCTATATCACTGGCTAGTTTG
TGAATCACTATCACTGGGCATCTATAGATCTTATAAGTTCAACAGATTAATCTTGTGATT
AAGTGCGACGCCTTTTAGTGAAAAGGTTGGAGGTGCGAAACTGGTCGCAACCTAGTTGGT
TGTCCTTGGTGGTCAATGCACTTAACGGACATTATCTGAGCCCAGCGGATTAATGGGTTC
TACCAAATTGAAGGAACGTGTCTATCATATACAACACACTGCAATAGCTCCGGTAACCCG
ACGGTGGGCGCGAGGTGATCTGACGATTGCCCGTGTGTTAAAGTCCATGGTGTACCCAAA
ATAAATATCCGATCCTATTGTCACGCCTGACACAACCCCACCATTACCTGTTGTCCAACT
GGGTAAAGCATGTGGTCTGTATCCATGGTAGTGGGGTTCAATCCCCCCCCCCCAATACGA
CAAAAATACAACCTCCTCCCACAATACAACCCCCCCCCCCCAATATGACCCCCCCAGTAT
GTGAGAGGAGCGGACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGA
ACACCGACAGCGTCTAAGAATTCTTGACCGAAATGTTGATTCGAGTTTAAACCTCTTATG
TGTCGCTACTAATTCCAAGTTTAAACTATTAGCTCTGCATGTTATTAGGAATTCATGTTT
TTTTCATATATTTGGAAAATTCCTGCATAAAGACCAAATATAGTAGTCGTTTATTATAAA
ATCCATTTTCCAATTTCTTTAGATTATTTAAAGAAAATAAGAATTACAATCATGTTTCAG
CGCCGTGCAGTTTATTTTCTGTTTTTCTATATTTTGTTTGTGGAGCCTTGTTGCACGTAT
AACTTTGAATCGACCTTTTAACCTTTTGGGGGAAAGGTGAAAGGTCATATGTTTTAGAGG
TCATGACCTCTATGATGGGGTCATGACCTCCTAATGCCAACTTTATGATGAAACTTTGTA
AAACCTTTTAAGGAGAAAAGTTTTGGAAACATTTTGGCGTCG
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