SelenoDB
Release 2.0
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Transcript Report for SPT00000584_2.0
Identity
TranscriptSelenoprotein K (SelK)
SpeciesCiona savignyi (Sea Squirt)
Transcript IDSPT00000584
Transcript release2.0
External IDNone
Gene SPG00000488_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000584_2.0 # Transcript # Selenoprotein K (SelK) # Sea Squirt (Ciona savignyi) # Full length # Forward
GGACAAATTGAGTCCAGTAGATCAAGATGGAGAATTTCATTCATTTCTGATTCGTTCTGG
GGATTAATCAACTTTGTTGTGTTGTTGTAAGTTTGTGTTCCGATTTTGCAATTATTGTTG
GAATGTTCAAATTGATACAATTTGCGAACAGAAGTATGGAAGTTGCCAAAAAACTTCCTT
CGTAAAATTTCTCCTGTTTAGCATTTTACCACAAAAATCTTTTCCAGAGCTGCGCAACTT
AACCCTTGGATTTATATAGGATTTTCATGTTTATCTATGTGAATGGGAAAACTCAAGGGG
GTTAACACACGACAATCGTCAGATCACCTCGTGCCCACTGTCGGGTTAGCGGTGCTATTG
CAGTGTGTTGTATATGATAGACACGTTCCTTCAGTTTGGTAGAACCCATTAATCAGCTGG
GTTCAGGTAATGTCCATTAAATGCCTTGTCCAAGGACACAACCGACTAGCTAGCGACCAG
TTTCGGACCTGCAATCTTTTGGATAAAATGCAACACACTCACCAACCAATATATTCGGTC
AGCATCTCTTTTAAAAAGCCAACTTTTCATGCTGGGATAGAATGCAAACCTTTGTGATGG
GGTGTATAACCGAATAACATGTTGATGTAACAGAATAAATGTGTTTTTTTCCATAAAGTA
CAATATATTAAAGGGTCAATAAATGAAATTAAAGCATACTGAACTAAGGTATTTAAATCT
GTTGTGTTATTAGTTTGGATACATTGCCTTTCAACCGAATGGTTGCAGATTCAAAACTGG
TCTTTTTCCTTGGGCAAGGTAAATCAGGAGGAGTTTAAAACAGAAGAAATGTACCTTAAA
TAAACAAATAATAAAGGATAAAAAATGAATACCTAACATGGACATTAACGCACAACTTCA
TCAAACATTATCTTTCAGTTTTAAGACAATGGTGCAACCAGATTTAACAAAGCATGGAAG
AGGTTTACAGTCACAATACTCTGCCAAACCAAAGTAAGTTACATTGGTTGCTGATGTTTA
TGCTGGTGTATATTATGAGTGGTAGCTGCATGGTTTTCAGAGTTCAGTTATTTGCAATTT
ACATGATTTACACACCCACAATGACCATCCATAGAATATGCACAACAAAGGCATGGAATT
GTTTGTTTTTAAAGAGTTCCATTGAATTGACCACAAAAACACTCCTCCCGCTGTTTAAGC
TTGTATTCCCTGTGCTCCCTCCCCATCCAGTATATCCTCCTTAATGTTACCCTATCCACA
ATAGTTTGTCCTCAAAATACCTAACTTCAACTGTACTAAATAACTAACTTCAACTATTAT
AAAGATTCCAACTTATGGATGGACACACTGGTTAACACCATAAAGCACTGTTGTGTCAAG
CGATGCACAAATATAGCTGTGAAAACGCTATTTATTCTTGCAAATTCTTTAGTCTCCAGC
TACAGCTCGAAACTTAAGCTTGCAATGTCTATAACATCCGGCAGGCCAGAATAAAAGACC
TGGCAGTAGTTTGCCCAATTCTGTTATAGAACAATCTTCATTTGCGTTGATTCTAACCAT
CCCGTATATTGCAGTGGAGGAGATGACTTTGGACCCCGTCGTAGAATGGGGGGCTTCAAT
CGGGGTTCCGGGCCTTCACCCCCTCCTGCTGCCGGGGGTGGGTGAGGTCGGTAAACGCTT
ACCCCTAATATGGGGTAAGCAATTAAAAAGGGGGTCGCATAACTAGACGTGTACAAAATG
ATTTGGGTTTTAAAATTTGAATTCTTAGTTGCGCGACCCTCTTTTTACCCTCAAACTTCA
GTATATGAGTGGCATGCATGGCACATGCGACACATGTTGCACGCATTGCACCTGTGGCTT
ATATAATTCATGAAGGGCTTCCATTCAACCCTATGATGGGTGTGGGTGCCTGGATCTATT
GAAGTTCA
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