SelenoDB
Release 2.0
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Transcript Report for SPT00000589_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesCiona savignyi (Sea Squirt)
Transcript IDSPT00000589
Transcript release2.0
External IDNone
Gene SPG00000493_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000589_2.0 # Transcript # Selenoprotein O (SelO) # Sea Squirt (Ciona savignyi) # Full length # Forward
AGTGTGAAGCAACTTGAAGAACTGCAGCTGGACAACCTGGTTATAAGGAGTCTTCCTTTA
GATAGCTCGAAGGTTCCAGGTTCAAGGCAGGTCCGGGGAGCTTGTTTTTCACTTTCGGAT
CCAACTCCGCTGGACAACCCGAGGCTTGTTGCGTGGTCAGACAGCGCTCTGAAGTTGCTT
GACCTTCAACACGATGCGGGATCCTCACAAAAATTGGCCGATTATTTCTCCGGGAACAAG
TTGCTTCATGGAAGCGTTCCTGCATCTCACTGTTACTGTGGTCACCAGTTCGGGTATTTC
TCGGGGCAGCTGGGTGACGGGGCTGCAGTGTATCTCGGCGAAGTTGTCAACAACTCCGGT
CAGAGATTAGAGCTCCAACTAAAAGGATCGGGCAAAACTCCTTATTCTCGTTCCGCTGAC
GGTAGGAAGGTACTCCGATCAACAATTCGAGAGTTCCTGTGTAGTGAAGCAATGTTTCAC
CTCGGTATACCCACCACCAGAGCTGGGACTGTCATTGTGTCCGACGACCAAGTCGTAAGA
GATATCTTTTACGACGGCAAGGCTAAAATGGAGAACTGTGCAGTAGTTTTGAGAATCGCG
CCGACATTTTTGCGGTTCGGGTCATTTGAGATTTTCAAACCTGTAGATCCAACAACTGGT
AGGAAGGGACCAAGTGATAGAATGCATGAAATCCTACCCCAAATGTTGGACTACTGTCTT
GAAAACTTGTTTCCTGAAATACCAACATCGATTCCAAAATCCCAACAGTATCTTGAGCTT
TACAAAGAAGTTTGTATTAAAACCGCGAAACTTGTGGCAAAATGGCAGTGTGTTGGCTTC
TGTCATGGAGTGCTTAACACAGATAACATGAGCCTTTTAGGCTTGACTATAGACTATGGT
CCATTTGGGTTCATGGATTATTTTGACCCAAACTTTCAATGCAACAACTCTGACAACCAA
GGCAGATACGTCTACAAAGCCCAGCCTGAAATCTGCCATTGGAACCTTAAAAAGTTTGCA
GAAGCAATCAAAGAGAGTGTCGATCTTGAGGACTCTTTAAAAGTTCTAGAAACTTTTTTT
CCTGTGTATAAAAAGGAACATTTTATGGGGATGAGTAAAAAGCTTGGGTTCTCGGTTAGT
TTTAATGACGATGAAAATCTCATTGAAAGCTTTTTGCAAACAATGCAAGATACCTTCTCC
GACTTCACCAACTCCTTCAGAAATCTAAATAAACTTTCATGGCCAGGGCTGGAAAATCAT
GCACAGACTTTCGATGCTACATTAGAATCTTTATTGGAGGGTTGTGCCGATTTGGAAAGG
GTTAAACTGCAAAATAAAAGCGGTTTTACAAGAGATCAAATAAATTCACTTAAGCAAATA
GCCGAACAGAACCCTGCATTTCTGGCAATGATCGGAGCTAGTGTTCAAGCCATTGAAGAT
GAAGTTAAGAAAATGGATGCTGGTGAACGCCTAGAAAATCTTTCCCAAAGCGAGCTGCAA
GTGACCAACAAAGAAAAGTGGAAAAGCTGGCTAGAGAAGTATGTTTGTAGACTGAAAAAG
GAAAGCGATAATGCGGAAAATCTTTTGGTTCTTGACACTCAACGAAAATACCTTATGGAT
GGCGCAAATCCAAAGTACATATTGCGCAATTATATTGCTCAAAATGCAATTGAGCTAGCG
GAAAACGGTGATTTTTCCGAAGTTCGAAATGTGTTGCACCGATTAGAAAACCCGTTTGAG
AAAGAACCTATAACTCAAGAGTGTGGATCGTCAAATTACAACGCTCTGCCTCCAATTTCC
GCACTTTCCTTGAAAGTTTCTTGATCTTCATAAATACCCAAATAACATAACGTTTATTTG
GGTTTATGTGATTATTTTCTTTTTTTTAATTTGGTGCATTTTTCACTAGCTTATGACGGT
TAATGTATTAACTTGTAATGCAAGCTGCTTTAACCCGATGTTTTGTTAGTGTTC
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