SelenoDB
Release 2.0
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Transcript Report for SPT00000589_2.0
Identity
TranscriptSelenoprotein O (SelO)
SpeciesCiona savignyi (Sea Squirt)
Transcript IDSPT00000589
Transcript release2.0
External IDNone
Gene SPG00000493_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000589_2.0 # Transcript # Selenoprotein O (SelO) # Sea Squirt (Ciona savignyi) # Full length # Reverse
GAACACTAACAAAACATCGGGTTAAAGCAGCTTGCATTACAAGTTAATACATTAACCGTC
ATAAGCTAGTGAAAAATGCACCAAATTAAAAAAAAGAAAATAATCACATAAACCCAAATA
AACGTTATGTTATTTGGGTATTTATGAAGATCAAGAAACTTTCAAGGAAAGTGCGGAAAT
TGGAGGCAGAGCGTTGTAATTTGACGATCCACACTCTTGAGTTATAGGTTCTTTCTCAAA
CGGGTTTTCTAATCGGTGCAACACATTTCGAACTTCGGAAAAATCACCGTTTTCCGCTAG
CTCAATTGCATTTTGAGCAATATAATTGCGCAATATGTACTTTGGATTTGCGCCATCCAT
AAGGTATTTTCGTTGAGTGTCAAGAACCAAAAGATTTTCCGCATTATCGCTTTCCTTTTT
CAGTCTACAAACATACTTCTCTAGCCAGCTTTTCCACTTTTCTTTGTTGGTCACTTGCAG
CTCGCTTTGGGAAAGATTTTCTAGGCGTTCACCAGCATCCATTTTCTTAACTTCATCTTC
AATGGCTTGAACACTAGCTCCGATCATTGCCAGAAATGCAGGGTTCTGTTCGGCTATTTG
CTTAAGTGAATTTATTTGATCTCTTGTAAAACCGCTTTTATTTTGCAGTTTAACCCTTTC
CAAATCGGCACAACCCTCCAATAAAGATTCTAATGTAGCATCGAAAGTCTGTGCATGATT
TTCCAGCCCTGGCCATGAAAGTTTATTTAGATTTCTGAAGGAGTTGGTGAAGTCGGAGAA
GGTATCTTGCATTGTTTGCAAAAAGCTTTCAATGAGATTTTCATCGTCATTAAAACTAAC
CGAGAACCCAAGCTTTTTACTCATCCCCATAAAATGTTCCTTTTTATACACAGGAAAAAA
AGTTTCTAGAACTTTTAAAGAGTCCTCAAGATCGACACTCTCTTTGATTGCTTCTGCAAA
CTTTTTAAGGTTCCAATGGCAGATTTCAGGCTGGGCTTTGTAGACGTATCTGCCTTGGTT
GTCAGAGTTGTTGCATTGAAAGTTTGGGTCAAAATAATCCATGAACCCAAATGGACCATA
GTCTATAGTCAAGCCTAAAAGGCTCATGTTATCTGTGTTAAGCACTCCATGACAGAAGCC
AACACACTGCCATTTTGCCACAAGTTTCGCGGTTTTAATACAAACTTCTTTGTAAAGCTC
AAGATACTGTTGGGATTTTGGAATCGATGTTGGTATTTCAGGAAACAAGTTTTCAAGACA
GTAGTCCAACATTTGGGGTAGGATTTCATGCATTCTATCACTTGGTCCCTTCCTACCAGT
TGTTGGATCTACAGGTTTGAAAATCTCAAATGACCCGAACCGCAAAAATGTCGGCGCGAT
TCTCAAAACTACTGCACAGTTCTCCATTTTAGCCTTGCCGTCGTAAAAGATATCTCTTAC
GACTTGGTCGTCGGACACAATGACAGTCCCAGCTCTGGTGGTGGGTATACCGAGGTGAAA
CATTGCTTCACTACACAGGAACTCTCGAATTGTTGATCGGAGTACCTTCCTACCGTCAGC
GGAACGAGAATAAGGAGTTTTGCCCGATCCTTTTAGTTGGAGCTCTAATCTCTGACCGGA
GTTGTTGACAACTTCGCCGAGATACACTGCAGCCCCGTCACCCAGCTGCCCCGAGAAATA
CCCGAACTGGTGACCACAGTAACAGTGAGATGCAGGAACGCTTCCATGAAGCAACTTGTT
CCCGGAGAAATAATCGGCCAATTTTTGTGAGGATCCCGCATCGTGTTGAAGGTCAAGCAA
CTTCAGAGCGCTGTCTGACCACGCAACAAGCCTCGGGTTGTCCAGCGGAGTTGGATCCGA
AAGTGAAAAACAAGCTCCCCGGACCTGCCTTGAACCTGGAACCTTCGAGCTATCTAAAGG
AAGACTCCTTATAACCAGGTTGTCCAGCTGCAGTTCTTCAAGTTGCTTCACACT
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