SelenoDB
Release 2.0
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Transcript Report for SPT00000596_2.0
Identity
TranscriptSelenoprotein U2 (SelU2)
SpeciesCiona savignyi (Sea Squirt)
Transcript IDSPT00000596
Transcript release2.0
External IDNone
Gene SPG00000500_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR    
Sequence
>SPT00000596_2.0 # Transcript # Selenoprotein U2 (SelU2) # Sea Squirt (Ciona savignyi) # Full length # Forward
CAGCACTTCATAGATTACGTCACGAAGGAATATGTGGAGGATTTCTCCAAGATCTTCCCT
CATCATTTGCAGGTATTTTCACCATTTGGTGCAGAATGTTTAAGTTTTTTTTTGACCAAT
TTAGAAAAACATTAAACAAAACTAATTATGCTAAAGAAACCAGATAATATGTCAAAACAA
ACGGTCGTTTACGTCTGTATTCAAAAAACATACAATGATTAATTTTAGTGGAAGTGGCCG
GAAAATCTAAGCAAAATTTCGATAAAATAGAACGAATTGTGTTAAAATCCATTTATATAA
AGCCCTGAAGAAGACTGGGTTTATGCGACCAGTACTGTGGGGGAGCTGGCTTTAGGAGAA
GGTGTGGCCCGAAAGAGTGGACTAAATGGATTAAAACCAAATTTCACCTACCACTTCCTT
CATAAACATTGATAACCAATCAACTTGATGAAACAGGGACGAAACGTGAAGATAGTTGTG
GTGGGATGCGCCCCATCTAGATTCATCGCGCCATTTTGTAACGAAACAAATTTCGAACAT
TCCATGTTCTGCGACTCCAAGCGAATCATCCATAAATCACTGGGGTTGCATGAATACCCA
CAAATATCCTTGTCAAGTAAGTCATACCTGCTTAATAACCTACATGGTGGAGGTGGTGGC
TCAATGCAGTGTGTTGTATATGATGGAGAGTTGTTTTATTCAACTTGAAAGAACCCCTCA
ATTCACTGGATTCATGTGATGTCCATTTGGTGCCTTGTCCAAGTACACCTAACGCGTGAT
GCCGTGACGCGTGATGCCGTGACGCGTGATGCCGTGACGCGTGATGCCGTGACGCGTGAT
GCCGTGACGCGTAACGCCGTGACGCGTGACGCCGTGACGCGTGATGCCGTGACGCCGTGA
CGCGTGACGCCGTGACGCGTGATGCCGTCACGCGTGACGCCGTGACGCATGATGCCGTGA
CGCGTGATGTCACGCGTGACGCCGTGACGCATGATGCCGTGACGCGTGATGCCGTGACTC
GTGATGCCGTGACGCGTGATGCCGTGACGCGTGATGCCGTGACGCGTGATGCCGTGACGC
GTGATGCCGTGATACCATGATGCGTGATACCATGATGCGTGATGCCGTGATGCGTGATGC
CATGATGCGTGATGCCATGATGCGTGATGCCATGATGCGTGATGCCATGATGCGTGATAC
CATGATGCGTGATACCATGATGCGTGATGCCATGATGCGTGATGCCATGATGCGTGATAC
CATGACGGGTGATACCGTGACGCGTGATGGCGTGACGCGTGATTTGTGATACATGACACA
GATGAAGTGAGTCCCCACGTGAAGTCGAACGCGATCTCGGGATTCTTCCTCACGATGTGG
AGATCGCTGAAGAGCCAGATCGAGCAAGGTGACGCAATGCAACAAGGAGGACAACTTGTC
ATCGACCCC
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