SelenoDB
Release 2.0
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Transcript Report for SPT00000645_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesDanio rerio (Zebrafish)
Transcript IDSPT00000645
Transcript release2.0
External IDNone
Gene SPG00000549_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000645_2.0 # Transcript # Selenoprotein U (SelU) # Zebrafish (Danio rerio) # Full length # Reverse
GGTCTGAAGCGTTAATCATCAGGACTGTCCTCTCATCAGAGTTTGGGATCAGTCTGTCAC
ATACACACCGTCAGAAGACACACATGATACACACACACACACACTCATGCTCATGATCAT
ATTTTCTTCTTTTCTGTATTGTTAATCATGCTGACAGCCTTGCGGACTGCAGAGAGATCA
GCTTTATCTCCAAACTCTTTCTCATGATGCTCCAGAAGAATCCCCTGCAACAAAACACAA
CACACACATGACACGGAGACTGTAAAGCTGTTTATACATTTGCATTTTAATGAAGACCTA
TCATCCCTTTAATAGATTAAGCACAGTTGTGTGAGAATACCTCCAGCCTCTAATGGTCAA
CATGAATTAATTGCATTCGTTTATAATCAGACTTGATGAATGAAACACTTTGATTGACAT
TCTCCTTTTGTACGTGTCATCAGAGGGGGGAAAGCCACACCCACTATTCTCCCTCATTAG
CATAAACAGCAGCCCTGAGTGAGAAGCAGCCGTCTGTCCATTCGCCATTAGAGTGTGTGA
GCTGCTGAAGATAATGTCAGCATAGACTAAGGGGATTATAGATGTGGCAAAAGTGCACAA
CAGGTCTTCTTTAAAGTCACGCATGAGTACGTGTAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNACACACACACACACACACACACACACACATTCTTGTAAGTACTG
AAAGATTAGTCACATGATCATATGAAACACACAAACACACACACACACACACACACACAC
ACACACACGCACAGACACACGCACACACACACACACACACACACACATTCTTGTAAGTAC
TGAAAGATTAGTCACATGATCATATGAAACACACAAACACACACACACATACACACACAC
ACACACACACACACACATTCCTGTAAGTACTGAAAGATTAGTCACATGATCATATGAAAC
ACACAAACACACACACACACACACATTCCTGTAAATACTGAAAGATTAGTCACATGATCA
TATGAAACACACAAACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACAAAAACACAAATTCCTGTAAGTACTGAAAGATTAGTCACATGATCATATG
AAACACACACACACACACACACACACACACACACACACACACACACACACACACACTCAC
CTCTCTGCACAGAGATCATCCTGGCCGTCTGACAGCCATAATAACAGCTCCGGTTCACTT
CCACAGAGAGACTGCTTTAAAACTCCCTGCATCTTCTGAAAACACAACACACACAAAAAC
AAACACACACACACACACACACACACACACACACACACACACGGTCAAGGTTTCCCTGCT
ACTCCTGCCAGCTCATCACCCATCACCTTTGTCCCTTAAGCAAGCAGGTGAGCTGACGTG
AAATGTGAGTGGAGCTAATCCATATCACCAAACCACTCGATGCTTGACAGAATAATACAG
CATAATATTATTCATCTAAATTACTCAATAATCATACAACAAATAAACAAATACAGTATA
AATTATATAAATATCGGAAATGGCTGCAACACTGAATGACTGTCAGTGATTCTCTATTAG
TGTGAACCAGCATGATCAACTGCAAACTCAGAGATGGGCACAAATGCATCGAAATGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTCCTGTTTGCAAATGCAAAA
CAACAGAGAGTATTGTTTACACAAACTGACAAAGAATCATGTGAAGCACTGCAGTGCAAT
ATTATCTTTTTAATTAAAACTACATACATGCAATAATTTAATTACGTATTATACATGTGA
AGTCTTTCAAAATATTTACTTACTAATTATTGTAATACATACTGTAGCATACTTTAGTTT
TTACTATAGTACATGTTAGTGTACTGTAGTATAATATACCAAATAGATGTAGAAAATTAC
AGCATTGCCTAATTTGTTTACATAAATGTTGTTGTTGTGTTACCATGGCAACTGTGAAAT
CACCACATCAGATCAATTACTATTGTTTTTGTGTTATCATAGCAACCATAGAATCATCAC
AACAGATCAATTACAATGGTTGTTGTGTTACCATAGCAACCGTAGAATCACCACATCAGA
TCAATTACTATGGTTGTGTTACCATAGCAACCGTAGAATCACCACAACAGATCAATTACT
GTGGTTGTTGTGTTACCATAGGAACCGTAGAATCATCACAACAGATCAATTAGTATAGTT
GTTGTGTTACCATAGCAACTGTAGAATCACCACAACAGATCAATTACTATAGTCGTTGTG
TTACCATAGCAACCGTAGAATAATCACAACAGATCAATTACTGTAGTTTTTGTGTTACCA
TAGCAACTGTAGAATCACCACAACAGATCAATTACTATAGTTGTCGTGTTGCCATAGCAA
CTCTAGAATAACCACATCAGATCCATTACTGTAGTAATTATGTTACCATAGCAACTGTAA
AATCACCACAACAGATCAATTACTATAGCTGTTGTGTTACCATAGCAACTGCAGAATCAC
TACATCAGATCAATAACTTAAGATGTTGTGTTCCCATAGCAACTGTAGAATCACCACAAT
AGATCGATTTTTGTGTTACCATAGTAACTGTAGAATCACCACAACAGATCAAATACTATA
GTTGTTGTGTTACTATAGCAACTGTAGAATCACCAGAACAGATTAATTATATAGTTGTTG
TGTTACCATTGCAACTGCAGAATCACCACAACAGATCAATTACCATAGTTATTGTGTTAC
CATAGCGACTGTAGAATCACAACAGATAAATTCTGGTACTTTACTACAATATAATTCAAA
AACACTGCAGTATTTACTACAAATCACAATAGTTTGTATAGTGTATTATAGAAGTTATAA
ATTCCCTTTATTTGACATTGACATCATGAACGTTGTGTTGTGTTGTGTTGTGTTGTGTTG
TGTTGTGTTGTGTTGTGTATTTGACCTTCAGTGGTGGGTCTGAGGTCTGCATCAGCCAGT
ACATCCAGAGACGTTCGCTCCGGTTTGGTCAGAAACAGATCTGTGTTGGCCACCAGTACA
TAAACCACAAAAACACACAACAGCACAGACCACAC
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