SelenoDB
Release 2.0
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Transcript Report for SPT00000646_2.0
Identity
TranscriptSelenoprotein U (SelU)
SpeciesDanio rerio (Zebrafish)
Transcript IDSPT00000646
Transcript release2.0
External IDNone
Gene SPG00000550_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000646_2.0 # Transcript # Selenoprotein U (SelU) # Zebrafish (Danio rerio) # Full length # Reverse
GGTCTGAAGCGTTAATCATCAGGACTGTCCTCTCATCAGAGTTTGGGATCAGTCTGTCAC
ATACACACCGTCAGAAGACACACATGATACACACACACACACACTCATGCTCATGATCAT
ATTTTCTTCTTTTCTGTATTGTTAATCATGCTGACAGCCTTGCGGACTGCAGAGAGATCA
GCTTTATCTCCAAACTCTTTCTCATGATGCTCCAGAAGAATCCCCTGCAACAAAACACAA
CACACACATGACACGGAGACTGTAAAGCTGTTTATACATTTGCATTTTAATGAAGACCTA
TCATCCCTTTAATAGATTAAGCACAGTTGTGTGAGAATACCTCCAGCCTCTAATGGTCAA
CATGAATTAATTGCATTCGTTTATAATCAGACTTGATGAATGAAACACTTTGATTGACAT
TCTCCTTTTGTACGTGTCATCAGAGGGGGGAAAGCCACACCCACTATTCTCCCTCATTAG
CATAAACAGCAGCCCTGAGTGAGAAGCAGCCGTCTGTCCATTCGCCATTAGAGTGTGTGA
GCTGCTGAAGATAATGTCAGCATAGACTAAGGGGATTATAGATGTGGCAAAAGTGCACAA
CAGGTCTTCTTTAAAGTCACGCATGAGTACGTGTAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNACACACACACACACACACACACACACACATTCTTGTAAGTACTG
AAAGATTAGTCACATGATCATATGAAACACACAAACACACACACACACACACACACACAC
ACACACACGCACAGACACACGCACACACACACACACACACACACACATTCTTGTAAGTAC
TGAAAGATTAGTCACATGATCATATGAAACACACAAACACACACACACATACACACACAC
ACACACACACACACACATTCCTGTAAGTACTGAAAGATTAGTCACATGATCATATGAAAC
ACACAAACACACACACACACACACATTCCTGTAAATACTGAAAGATTAGTCACATGATCA
TATGAAACACACAAACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACAAAAACACAAATTCCTGTAAGTACTGAAAGATTAGTCACATGATCATATG
AAACACACACACACACACACACACACACACACACACACACACACACACACACACACTCAC
CTCTCTGCACAGAGATCATCCTGGCCGTCTGACAGCCATAATAACAGCTCCGGTTCACTT
CCACAGAGAGACTGCTTTAAAACTCCCTGCATCTTCTGAAAACACAACACACACAAAAAC
AAACACACACACACACACACACACACACACACACACACACACGGTCAAGGTTTCCCTGCT
ACTCCTGCCAGCTCATCACCCATCACCTTTGTCCCTTAAGCAAGCAGGTGAGCTGACGTG
AAATGTGAGTGGAGCTAATCCATATCACCAAACCACTCGATGCTTGACAGAATAATACAG
CATAATATTATTCATCTAAATTACTCAATAATCATACAACAAATAAACAAATACAGTATA
AATTATATAAATATCGGAAATGGCTGCAACACTGAATGACTGTCAGTGATTCTCTATTAG
TGTGAACCAGCATGATCAACTGCAAACTCAGAGATGGGCACAAATGCATCGAAATGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTCCTGTTTGCAAATGCAAAA
CAACAGAGAGTATTGTTTACACAAACTGACAAAGAATCATGTGAAGCACTGCAGTGCAAT
ATTATCTTTTTAATTAAAACTACATACATGCAATAATTTAATTACGTATTATACATGTGA
AGTCTTTCAAAATATTTACTTACTAATTATTGTAATACATACTGTAGCATACTTTAGTTT
TTACTATAGTACATGTTAGTGTACTGTAGTATAATATACCAAATAGATGTAGAAAATTAC
AGCATTGCCTAATTTGTTTACATAAATGTTGTTGTTGTGTTACCATGGCAACTGTGAAAT
CACCACATCAGATCAATTACTATTGTTTTTGTGTTATCATAGCAACCATAGAATCATCAC
AACAGATCAATTACAATGGTTGTTGTGTTACCATAGCAACCGTAGAATCACCACATCAGA
TCAATTACTATGGTTGTGTTACCATAGCAACCGTAGAATCACCACAACAGATCAATTACT
GTGGTTGTTGTGTTACCATAGGAACCGTAGAATCATCACAACAGATCAATTAGTATAGTT
GTTGTGTTACCATAGCAACTGTAGAATCACCACAACAGATCAATTACTATAGTCGTTGTG
TTACCATAGCAACCGTAGAATAATCACAACAGATCAATTACTGTAGTTTTTGTGTTACCA
TAGCAACTGTAGAATCACCACAACAGATCAATTACTATAGTTGTCGTGTTGCCATAGCAA
CTCTAGAATAACCACATCAGATCCATTACTGTAGTAATTATGTTACCATAGCAACTGTAA
AATCACCACAACAGATCAATTACTATAGCTGTTGTGTTACCATAGCAACTGCAGAATCAC
TACATCAGATCAATAACTTAAGATGTTGTGTTCCCATAGCAACTGTAGAATCACCACAAT
AGATCGATTTTTGTGTTACCATAGTAACTGTAGAATCACCACAACAGATCAAATACTATA
GTTGTTGTGTTACTATAGCAACTGTAGAATCACCAGAACAGATTAATTATATAGTTGTTG
TGTTACCATTGCAACTGCAGAATCACCACAACAGATCAATTACCATAGTTATTGTGTTAC
CATAGCGACTGTAGAATCACAACAGATAAATTCTGGTACTTTACTACAATATAATTCAAA
AACACTGCAGTATTTACTACAAATCACAATAGTTTGTATAGTGTATTATAGAAGTTATAA
ATTCCCTTTATTTGACATTGACATCATGAACGTTGTGTTGTGTTGTGTTGTGTTGTGTTG
TGTTGTGTTGTGTTGTGTATTTGACCTTCAGTGGTGGGTCTGAGGTCTGCATCAGCCAGT
ACATCCAGAGACGTTCGCTCCGGTTTGGTCAGAAACAGATCTGTGTTGGCCACCAGTACA
TAAACCACAAAAACACACAACAGCACAGACCACACACACACATACAGCTCGTCCAGACCC
TGCAGAAACACTACACACACAAACACACACTCCTCAGTAAAGCACATCCACAGCCAATCA
CATTGTTTTTATGATTTTCACTATTATCATTTTCCACATGAAAAAATACTACAGTAATTT
ATAATAAATACTATAGTAAATAATAATTAATCTGTTAGTAACACAACAATTATAGTAATA
TAAAAAAATGACTTACAGTATAGGGTCTCACAATACCACAATACCAAGTACAATATCCTA
CAGTAGTTATTAGAGTGTATCTGTTTACTGTAGTTAATACTACATGATCCTGGAGCAGTC
ATTAACAAAACGTTGTGAATATTATAATACAACTATAGAATGTTTTGGAAAAAAACTATA
TTAACTATAAATTACCATAGTATTTTATTTCATGTGGGGTTCCTTCACTGCACAAAGTAA
TGCATTTTCAAATGATTTAACAATGTGAACTGATTAAGCATGGACAAGTGCATGAACATT
AACATTCAAGACTAAAAACTAAAAAAAAAAAGGATACAAAGCAAACAATTAAAAATAATA
ATTATTAGAACTCTATCAGGCACTAATAAATCCATAAAAGAATAATTATATATTAATACT
CACTGTCGACTGCAGCGTTCAGCGTCTCATATGTGATGCTGTTTCTCCCTCACTTCATAA
AACATTGCACAATCAGGCACTATTTAAATGAGCCATATTCATAAAAGGAGCATCAGCCAA
TCAGGAAAGAGAACAGAATGACCTCAGGCTATGAATTCCCACAATAAAACACTGATGAAA
ATCATAAATCAGATTGTTTTGCATTCCTGCACTAGTCAGAAAGGAAAAGTATTAGAATTA
AAAGATTTAAAACTGTATTTCTCAGCCATTTAAGTAAGATTTTTGAAGTCACCCTTGCAT
AATATTTACATTTTTCATTAACAACTTACTAATAGTTTTATTATTATATATAAAAGATAT
TAATTTTTATTATTTTTGTTAATTATTTTAACTTATCAATTTTCCAATTATAATTTTTGA
ACATGCATATATATTAGCATACATAAAATATTTACTAATTTATAAAAAGTTTCCATTTAT
TTCTTTGATTTGTTATGCACTTGCTTTTTTAGTATCTCTGGAACACCAGAAAAGAATGCA
TTCAAAGCAATAATGACACACATTTAATAGACTGCAGTGTGTGTGTTTTATTCAGTGTGT
GTATGTAGAGCGTGAAACATCAAGACGACTCCTTCATCTGAGTTTAGAGTCGGTCTGTCA
TCAACTACACACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACATTAACATATGCAA
ATAGTAATAATATCCTGCAACTTCCAGCTTCATATTCAACTAAGCATCTCCATGACAGAT
CAAGTGAATGCTTATTGAGTTCAAGCCTATTTGAATTTCAGAGATAATTGTTGAGTTTTG
ATCTGTTCAACAGCTTGAAGCACATCAGACTTCTGGACTTTATCCCCAAACTCCATCTCT
CTGTGCTCCAGGAGGATTCCCTGTCAAAATAAACAGATGGGAACTGTGCTTTAATTCATA
TTTAGCTTCATGCATTAGTAATGCATTACAAGTAACGTGAGTTAGTATTCAGATTACTCT
TTTCCAGTAACCAGTGAAGTAACGCCTTATTGCATAAACACACAGTGAACATGTACTCAT
CTCACTTGATAAACAATAAAACAGATGCAGTTTCCCTTAGAATGAGTACAAGCGGTGCAA
TTCAAACCCTCAATATTAATTCCTGAAGAATGTTAAACTTGGGTGACACGGTGGCTCAGT
GGTTAGCATTGTGGCCTTACAGCAAGAAGGTCGCTGGTTCGAGTCTTGGCTGGGTCAGTC
GGCATTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTGGCGTGGGTTTCCTCCGGGTGC
TCAGGTTTCCCTCACTGTCCAAACACATGCGGGGAACTGATTGAACTAAATAGTGAATGA
GTGTGAATGAGTGTGTATGGGTGTTTGCCAGTACTGGGTTGCAGCTGGAAAGGCATCCGC
TGAGTAAGACATTCATTCAATTATTTTCTTTTCAGCTCAGTCCCTTTATTAGTCACAGGG
AGCCACAGTGGAATGAACCACCAACTTATCCAGCATATGTTTTACGCAACAGATGCCCTT
CCAGTTGCAACCCATAACTGGGAAACATCCATACANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNACACTACGGACAATTTAGCCTACCCAATTCACCTGTACCGCATGT
CTTTGGACTGTGGGGGAAACCAGAGCACCCGGAGAAAACCCACGCGAACGTAGGGAGAAC
ATGCAAACTCCACACAGAAACGCCAACTGAGCCGAGGTTCGAACCAGCGACCTTCTTGCT
GTGAGGCGACAGCACTACCTACTGCTCCACTGCCTTGCCCTGTGTAAAACATATGCTAGA
TAAGTTGGCGGTTCATTCCGCAGTGGTGACCCCTGATAAACAAAGGGACTAAGCTGAAGG
AAATGAATGAATGATGTATATCAGACATTACGTTCTTCATTATATCTGTCAGTGCTGTGT
TCACACACCTGTTGTTGTGGTCCGATGACATAAACGGCCCCCAAAACAAAGCCTTCGCCC
TTGACGTTTCCCCAGTATCCGCTCTGATACGCCCTCCATCCGTTCATCCAGACTCCGCCA
CGCAGAATCCCAGAGACCCCCATCCAGCGCTCCAGCGGCCCGAAGAAACCCCTCTAAACA
CAGCACAGCCACACCCATGAGAGAGCTGGAGGAACTGGAGGGATCTGTGTTGATCAGTGC
TGTTTCGCAGTGTGTTGATCATCATCAGCGCTCACCTGCTGATCCAGGAAAATCTCCCCG
CTGAAATACAGCCTGAAGAGCTGAATCTCTGAGCCGACGTTCTCTTTGACCACCGCATAC
AGACACACTCCACACTCATCCAACTGAGCCTTCAGAGAGGAGAGATCAGACACCTCCTGA
CACACACACACACACACACACACACAAAGAAACACACCGATTTATGAATTCACAGTGACA
AAAAGTGTGTGTTTGTGTGTGTTTTTGTGACTTATCAGACATATTGTTATCAATGACATA
TATTAATATAACATTTAATGCCATTCAAAACACTTATAAATAATACAGAATGAGATTGTT
TCAGTAATAATGCACACTGTACTCTGTAATGGTTGGGTTCAGGGATAGTGTTGGTGTACA
ACGATAGAAAATACACTTTATACAGTATATAAACACTGAAAACCTTTCGAATGTCCCCAC
AACTCACATAAAACAAATTGTGTGTGTGTGTGTGTGTGTGCGCATGACTATACACCTCTC
TGCACATGAATCATCCAGGTCTCCTCACAGCCATAATAACAGCTCCTGAACTCTCCCACA
GTTCTCTGGCCTTAAACACTCGATCATCTGCAGACACACACACACACACACACACACACA
CACACACACACACACACACACACGCACACACACATCACAACTCATATTTCATCTCTCACA
TACAAAACTGAAGCAAGAGAGTGTGTTTCAACAGGACTTTAGGGAGAAATCAAGCTGTTT
TGTAACCAGCGGTCATGAGACAGTTACGACAGCGCGGTCAGATCCCTGAGATTACACAAA
ATAATCCCATTGAAATCAACATTAGCCTCGGTTTTACACAAGATATGCAAAAAATAATAA
TACAAACCTGAAATGGAAAATGGAGCATAATCTTATGGTGTACTTTGGAAATATAGAGAG
ATTCATGCTTAAAACTGTTTACAGTGAATAACGTTTCACACTATAGTACGTGTAACCCTG
CCGGTCCTACGCCACCCAACCCGCTCCAAGCTGATATCGAACCGGCAACCTTCCGCATGG
GAGTCGGTTGCTCTACCAAGGAGGCTAAAGACCATGACCTCTAGTGTCTGTCGCTAGAGC
ACCTTCAGAGGTCAGAGGAGTGAGGTTTACCTGCACAGCACACACTAGCTGGCCTCCGTT
ACACTCACCCCCCTTTAACATCACTCCCATCTGGGTCACGGCACCAATGTAACCCTCACC
GGTCCTACACCACCCAACCCGCTCTGAGCTAGTATCGAACCGGCGACCTTCCGCATGGGA
GTCGGTTGCTCTACCAAAGAGGCTAAAGACCATGGCTAGAGCTAGAGCAGAGCACCTTCA
GAGGTCAGAGGAGTGAGGTTTATCTGCACGGCACACACTAGCTGGCCTCCGTTACATACG
CGTATAATATTTTATTCTTTCGTTCATTGGTTTGTTGGTTTTCGTCTTGAAGAAACCCCC
CTCCTCCCCTTCTTCCACCTTTATCCAGAATAGGTGGCTCGGTGGCCCAGCAGGAATTCC
AAAGGCTCCTTGCTGGAGCATCTGGCGTTTCTGTGTGGAGCTGGCACGTTCTTCTCGTGT
CCACACGGGTTTCCCCGGTTTTCTCTCAAAGCCTAAATACTCTCTACATTTCAGACCACC
TAAACCTAAGCCTCTTTTACTACACGTCTCGCTCTCAGGAAGTTCACCTTGGCCCTAGCT
GCAGGGGACTTTTGAGATCGCCCTCAGCTCAATCTCCCCTCGCCCAGCAAAGGGAGAGAG
CCCTGGACTCGAGAATTACTTGAGCTCAGGTCTCTCTCCCGGCCGGGACAGCATGCCAAA
CAAGCTTTTGTAAGTCATGAGCTAAGTGTGAGCTGTTAAAGCTACTATAAATGTAATTTA
ACATTTGAATGGCATGATCAGGTACTTCATAGGTTAAAAAAATGCATTTGAGTAATGTTT
CTCCATCTCTCACCTCCGTCCAGTGTTCTGAGGTCAGTGTCGGCCAGTTGAGTGAGCGTT
GCACACACGGGCTGTGTGAGAAAGAGCTCAGTGAAAGATCGTAACGCCTCGATGACAGTC
AAGCCCACAGAACCGACGGCACGGGTCACCAGCTCCAT
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