SelenoDB
Release 2.0
Chart Advanced
Transcript Report for SPT00000727_2.0
Identity
TranscriptSelenoprotein N (SelN)
SpeciesDipodomys ordii (Kangaroo rat)
Transcript IDSPT00000727
Transcript release2.0
External IDNone
Gene SPG00000631_2.0
Annotation
Prediction method(s)
(Selenoprofiles, Ensembl 68) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxFull length   Spliced   5UTR   CDS   3UTR         Forward   Reverse
Sequence
>SPT00000727_2.0 # Transcript # Selenoprotein N (SelN) # Kangaroo rat (Dipodomys ordii) # Full length # Forward
TTCCAGCCTCTGCTCCCAGAGACGATGACCAAGAGCAAAGTCGGCTTCCTAGGGGTGAGT
CATACCTTGTTCCGGACTCACCCCTAGGAACCCGTATGTGTGGCCTCTTCCGCTTTCCTT
CCTTGGGGTGCAGACTGTGCCAAGAGTGTGATTCGGACCTGCTGGGCGGATTCCCAGGCT
AATGGGAGAGCAGGAGAGACGCACAAGCCCCTCCCCAAGATGGGGAGTCTGGAGGGGGGC
AGGCCAGGAGGGGGGGAGTGCTTCCTGCAAGAAGGGACACCCAGCAGATCCTACTCACGG
GGTTGGAGGAAAGAGCAAGTGTGGGGCGGGTTGGCACTGCCGTGCCCACTTGCAGTGGTT
ACCTCTCCTGCCCGCCATGTCTCCAAGCCTCTAGCACGTGCCAGCTGCCTGACAGATGCT
CTGGTGAGCCGCAGTAAGCTGGACCTGAGGCGCAGGGTAGAGTCCCCAAGAAGGAGGGAA
CAGCGCCTCCCCCATGGGGGGGTGGTGATGAGGGCCTGTGGACAGTCTGAACCGGTCCCA
GCCTGCCCACGGTCTGCCCTCTCTCCTGCTTGCTCTAGGCCATCCTGACCACCACCCGGC
TTTGCCTTGGCAGCAGCAAGACACCATGGCGGGCTGTGAAATGAGCTTCTGTCATTAGTG
TGTCTCCACTGGCAGCGGGGGGCCGGGGCAGCACAGGGGGAGATGGGGACAACAGGCCAG
TCTCTAGGGTGGGAGGAGGCAGCCCAGAGGATGCTGGGAGAGAAGGGGCAGGGAGCAGCT
GCTGCAGGGGAGCAGGCCAGGGAGAGTGGGTGGCTCAGCTGCTGGCTGGTGACCCGAGCA
TGTGGGCCGCCGGCCCAGATGGGGACTGCGGAAGGGAAGCACGTCTGGCGGGCACAGGGA
GACCCCGTGAGGTTCCTAGGCGGGGAGAGGGGGGGCCCTGGAGGGAGGAATCCCGTGAGT
GGATGGAAGCTCAGTCTGACTCCCCTAGAAACATGTGGTTGCAGGGCGGTGGGTGANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGGGAGCTGGAGGCCCTCAGG
AGGGCGGCCAGGCGCCTGTCACAGCCCTGCATACCCTGGAGCTCTGCGGAGTGGGCAGCC
TGTGAGCAGAGGGGGTGGACAGCTCAGCTGCCCCCACACACACACCCCGCGCACAGCCAG
CCCCGCATTGAGAGCCTGCTGCTTGGTGAACCGCTGAGACAGAAGCCAGAGCCCCCACAC
TCCTGTCCTGTTTTCCCCTCTAACAGGGTGGAGGGAGAGGGGCCTGTGCCCCGTGGGGTC
TGAGCAACCTGAGGGGACAGGGCCAGCCGTCCTGGCAGCCCCCGTGTGCGCCCTGTAAGG
ACAGCTGGGTGCTGGGGCTCTTCACCCCAGATGCAAGCCCGATCCTGCAGCTTCTGACCC
TGCTCTCTCCTGCCCGGGAGCTCAGGCAGTGGAAGGCTAGGGAAAGCCTTTGTCCAGATG
AATGGCAAGAAGGGCAGGACCCTCTGAAGCGGCCTTCCTTCCCCTTCCTGTCAGGCCCCC
CCACTGTGACGGTACACATCTCACCCCAGAGATGGCTGCTCCTCCTTGTCAGCCTAGCCC
CAGACCCACGCTGATCTGGTTAGGAGGGTTGGGGGCGCAGGGCGTGGAAAGCGAGGCTGA
TGGAGGATGAGGCTGCCTGGGACCTGGCAGAGGCCCCTGTGTGAGCCCCAGGCTCCACAC
CCGTTCCAGTCCCGGGTGGCCCCTCCAGCTCCCTCCCTGCCCTGAGCCTGGCCAGGCCTT
GCTGGCAGGCCGCTGGGCCTCGCTTCCCTGGTGTCTGGAAGGGCGAGTTGAACCTCTCTG
TCCAAGCTTGTGATGGCCACTGGGACAGGCGCCTCTCTGGGCTCCCTCTGCCTAGGATCC
AGCTAGGGCTGTGAGGAGACCCCACAAAGGACAAGACCCTGCAGCGGAGGCCCCAGTGCC
CAGAGCCTCGGTCTTCCCTGCCCCAGGTCTCCCGCTTTGCCCTGTCCGGCCTCCGCAACT
GGACCACAGCAGCCTTGCCAAGTGCAGTGTTTGCCGCCCGCCACTTCCGGCCCTTCCTTC
CCCCGCAAGGCCAGGAGCTGGGCGAGCCCTGGTGGATCATCCCCAGCGAGCTGAGCGTCT
TCACCGGCTACTTGTCCAACAATCGCTTCTACCCGCCGCCCCCCAAGGGCAAGGAGGTAA
GGCCCCAGACCCAGAGCCCTGTCCCAGTGCCAGGCCCCTGCCCACCTGCACCCCGTGCCA
GGCCTGCCGCACCAGCTCACCTGACCCCCCCACTGCCGGGAAACCTGACTGAGTCTCCAC
TGCTGTCCCTGATCCAGGTCATCATCCACCGGCTCCTGAGCATGTTCCACCCCAGGCCCT
TCGTGAAGACCCGCTTCGCCCCGCAGGGCGCTGTGGCCTGCCTGACAGCCACCAGCGACT
CCTACTACACCGTGGTGTTCCGGTGAGTGCCCAGCCCAGGCCTCAGCCCCGCCCCTCCCA
CCCCGTGAACTCAGGCTCTGAACCTCAGTTTCCCCACCGGTGGATCTGGGTGGAGATGAC
CTCCTCCCAGAACAGTGAGAACTCTGGAGCTCGCTTGGCCTGGGGCTGGCGCCCATGCCC
ACAGAGGACACTGGTCACACACAGCAGAAGTGGGGAGCTCAGGGTGAGGCTTCCCAAAAC
GACAGCACACAGACCGTCCTTGAAGGGTGGCGGCATCCAGAGGGGCTCATGTGCTCTCCC
TGCCCCCACCTTTTCTCTTACCCTACTCTTCCTTCCCCTGCTCCCCCCCCAGAAGTCAGT
CTGGCCAAAGCTCCAGGCTTTGGGGGAGAGGAAGGGAGCTCCAGCTTAGCTGACTCTGTT
CCCCAGGATCCATGCCGAGTTCCAGCTCAGCGAGCCTCCCGATTTCCCCTTCTGGTTCTC
GCCAGGCCAGTTCACCGGCCACATCATCCTCTCCAAAGACGCCACCCATGTCCGCGACTT
CCGACTCTTCGTGCCAAATCACAGGTGCATCGGGTTCTATCCAAACTTCGAGGGCTCAGA
AGCAGCCCCTGCCGACCAGGGCCAGCTTCCGCTGTGAGGCAGGCTGAGGGTGACACTGTC
CCCTGGCCACCATCTCCCAGTCACTCACTAGGCTTGTCCTCCCGCTTGGGACGCAACACG
GAAGCCACGAGGCCCTCCCTCAGGCTAGCCTCCGGCCTTCCCATAACAGGCAGACCCAAA
CCACAGCGGCTCCTGCCACTGACGGGAGGCCCTGCTAGTGTCCAGGAAAGCCTCCTAGAG
GAAATGACACCAAGCAGAAACCCAGGGAGGTGAGGGAGCGGTGCACGCCAGGGCCCGAGG
GCAGACTTCCTGCGCCACTGAGCGCGGGCGGGGTTTCCGGCACTGTGCTAGCCACTTGCT
TGCACACTTGTTCAGGGTGAGCCACCTGTTGGGGCAGCATGGGGACCCAGGAGGCCTGGC
TTCAAAAGATCCCTTCTTGACAGCAGTGGACACTCCGGAGGCCTGAGCGGTGTGTGTAGG
GATGAGACTTGGGCTGGGAGCTCAGAGGCCCTAGTGAGTCCTGGCCCTGGCAGTAATGGG
TAGTGTGGCCAGTTTCCTCATCCTGGGCAGGAGTAGAGTGATGGCTGGGGCGGCCTGGAA
GATAACACTGTCTCTAGCAGTGGGAGTGGCTTCTCTCCTCCTTGGAGTCCTAGGGCAGAG
ACATAGCTACAGGAAGGCTGAGGAGGATGCATAGCTTTGCCCCACCTCCCCAGCAAGGAG
CACCTGCTCCCATGGGCTGAGCCCACCCCAGGAAGGAGGCTGACCCCCACAGCGGCATAC
CTGCTCCAACGCAGGGTTGATGCAGAGGTGTCACACTCCATAGACACCTGCCCTACATCT
GAGCAGTCGGTCCTGGGGCGCCCCCCTGTGGCAGATCTTCATATTACACTGACCAGGCCA
GACTGTTTTCCTCCCACCGCCCTGTTCTGCCTCACACCAGGAACTGTCTGATGCATTGAC
CATCTCTCGGCCTTGAAAGGGAAGGGTTATGGGAAGGACACAAGCCAAGCCTTGAGAGCC
CTTGGAACCCCAAGACTGGCCCAGTGGCTTTTCTGTACTGCCATCTGAAGTCTTGGGATG
GTTGCTGGGGCAAAGTTAGATGGAATCTGACACATGGCCAGTGGGCTTTGCTGTTGACAT
TGCTCTGCCCCGACGGCCCCCAGATCCCTGAATGTGGACATGGAGTGGCTGTATGGGGCC
AGTGAGAGCAGCAGCATGGAGGTGGACATCGGGTACATTCCCCAGGTGAGCACGGGCAGT
TCGACTGCCAGCCCCCGTGGGGCCTCAGGCTCTTCAGGCTCCCTGCCTCCCTAGAGTGGG
GTCTCCTTCAAGGCCCCCCAGGCCATCTCCGAGACACCCCTCAGGGCTGATTCCCGCCCA
GATGGAGCTGGAGGCCACAGGCCCCTCGGTGCCCTCTGTGATCCTGGACGAAGATGGGAA
GAGGATGGACAGCCGCCCGCCCTCCGGGGAGCCACTGCAGTTTGTGTTTGAGGAGATCAA
GTGGCAGCAGGAGCTGAGCTGGGAGGAGGCTGCCCGGCGCCTGGAGGTGGCCATGTACCC
CTTCAAGAAGGCAAGCCTGGGCAGGGGCGGAGGGTCAGGCTCTGAGGGGCTGAGGCTGGG
TGCTGGACCCACACAGGGCCAGCCTGCCCCATGGCTAACTCGTCTCTGCACCCAAGCCTG
GAGGAGGCTCTGCCATACTCACACACACGCACATGCACACTCACACACACACACAGACAC
TCACACACACACACATACACACACACTCACACACACAGACACACACACACACTCTCACAC
ACACGCACACTCACACACACACACACACACAGACACGCTTGCACCTATACACAGTTTCAC
GTGTATAAATATGCACTACACATAGACCCTGGACAGAGCCTTGGCCGCACACAGTAACTT
TACTCCATCCTGACTTGGCTGTAGGTCACCTACCTGCCGTTCACTGAGGCCTTCGACCGA
GCCAAGGCCAAGAACACGCTGGTTCACTCGATCCTGCTGTGGGGGGCCCTGGACGACCAG
TCGTGCTGAGGTGAGGGGAAACATGTACTGAGTGGAGACTGCCAGGACTCATCACAGCCA
TGAGGGACTCGGGCCACACGGGCTGGGAACATGAGCGAGGCTCGGGGGCTTCTGTGCTGA
GTCCAGAGGAAAGTGCCAGAAGAAAGGCCCCGCCATGTGGGTCAAGCACTTTGCTACTTT
GCTGCTTAGCGTTCCCCTCCCTGAACCTGTTTTCTCCACAGTGAGAGGGAGCAGTGTATT
TTCCTGAGGTTGTGAAAATGAGTGTGAAAGTGAGCTGGACTCTAAGGCCATTTCCACAAA
TGAGAGGAAGCAGGGCCGCAGGCTCTGCCATGTTCCTGACTCAGAAAACCCAGCTGGATG
CAAAGTTCTTTGGGTGTCCAGTGGTAGGCACAAAGTTGAGTCGAACAGTGTCCCTGGCCC
AGTTCAGTCATCCACAGGTCTGTGTCACACTCCTACAATCCCAGCTACTTGATAGGTAGA
GATGGGAGGATGGGATATAGGGCTAGCCTCAACTCAAAGGTTAGCCAGACCCTATGTCAA
AGGGAAAGCCGAGACTGGAGGCTCGGCTTACGTCGTAGGCTTCAAACCATAACACTACCA
AAGAGAAGAGAGAGAAAGAAAAAGGAAGAGGGAGGGGAAGAGAGGAAGGTGAGGATAAAT
CAGGTGCTGTGGCTCATGCCTATAATCCCAACTACTCAGGAAGCAGAGATGGGAGGATTA
CAGTCTGACCTCAGCCCAGGCAAAAGCAAGACCTTATCTGAAGAATAACTAAAGCAGAAA
GGACTGGTGTTGTGGTAGAGCAGCTGCCTCGCAAGCTCAAGGCCCTGAGTTCAAACCCCA
GCAGTCAAAAAGCAACAACAACAAAAATACTGATTGGAACCCCCCGGAAGGCACACAGCC
CCTCACCCTTCGGGCTGGGCTCCCCCTTACAGGTTCCGGGCGGACTCTCCGGGAGACCGT
CCTGGAAAGTCCGCCCATCCTTGCCCTCCTCAATGAGAGCTTCATCAGCACCTGGTCCCT
GGTGAAGGAGCTGGAGGACCTGCAGGTGAGCAGGGCGGGTGGGCCCCGGGGCAGTGCGGG
GGAGGGGGGGCAGGGGTGTAGCCACCGCGCTGTCCCCACAGAACAACCAGGAGAGCCCGA
CCCACAGGCAGCTGGCTGGCCTGCACCTGGAGAAGTACAGCTTCCCCGTGGAGATGATGA
TCTGCCTGCCCAATGGCACCGTGGTAGGCACCGTGGGCGCGGGGTGCGGCCGGGGCGCAC
TGAGCTAGGACTGAGCTAGGCTCCGCCGGTGTGTGCGCCGCAGGGGAGCGCGTAGGGGAG
CCGAGGGTGCGCAGGGGAGCGCGCAGGGGAGCGGAGGGTGCGCAGGGGAGCGGAGGGTGC
GCAGAGGGGAGCGCGCAGGGGAGCGGAGGGTGCGCAGGGGAGCGGAGGGGAGCGCGCAGG
GGAGCGGAGGGGAGCGCGCAGGGAGCGGAGGGTGCGCAGGGGAGCGGAGGGGAGCGCGCA
GGGGAGCGGAGGGCGCGCAGGGGAGCGCGCAGGGGAGCAGAGGGCGCGCAGGGGAGCGGA
GGGCGCGCAGGGGAGCGGAGGGGAGCGCGCAGGGGAGCGGAGGGGAGCGCGCAGGGGAGC
GGAGGGGAGCGCGCAGGGGAGCGGAGGGTGCGCAGGGGAGCGGAGGGTGCGCAGGGGAGC
GGAGGGGAGCGGAGGGCGCGCAGGGGAGCGGAGGGGAGCGCGCAGGGGAGCGGAGGGGAG
CGCGCAGGGGAGCGGAGGGGAGCGCGCAGGGGAGCGGAGGGTGCGCAGGGGAGCGGAGGG
TGCGCAGGGGAGCGCAGGGGAGCGCGCAGGGGAGCGGAGGGGAGCGCGCAGGGGAGCGGA
GGGTGCGCAGGGGAGCGCGCAGGGGAGCGCGCAGGGGAGCGCGCAGGGGAGCGCGCAGGG
GAGCGCGCAGGGGAGCGCGCAGGGGAGCGGAGGGTGCGCAGGGGAGCGGAGGGGAGCGCG
CAGGGGAGCGGAGGGTGCTTGCAGGGGAGCGGAGGGGAGCGCGCAGGGGAGCGGAGGGTG
CGCAGGGCCTCCTTGGCTGTCCTTCGGGCTGCCAGCGGTGAGGGCCAGTGTGTGGCGTTC
AGGGGTCCCAGGAACAGGGGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNTCACCAGCCCTAGCACCCCTGTGCGCTGCGGAGGGGGGACGGACACCCCGGCCCGG
CCTCTCAGACCCCGAGCCCAGTGGTCCTCAGCCCACTCCACACTCCACACCCTCCTCCCC
CTCCTCCCACGCTGCTGGTAGGATCTGGAGCCATCCCTGCCCCGTGGGGGGACCCATGAG
CCACCACCTCCACCCTCACCAGCAGCCCTACCTAACCACCGGGCTCCCCTCAACACAAGT
CCCGGGGTCACCTCCCTGGCCCTCACCGTCCAGTCACAGTCCAAGCCCTTGTGGGAGGAG
GAGGCTAGAGGGGGAGAGCCCCTCCTGGCTGCCCCTCACCCGTCCCAGAGGACACGAGCA
AGCGCCGGCCCAGGGCGCCAGGCTGCCACAGCACTCTGTGTGTGGAGCCCCCACACCCCG
CCCAGCGGCCTCCTGTCCCCAGCGGGTCACTCTCAGCTGGAGACAGCCTGTGCGGAGGCC
TGCAGCCAGCGGAAGTGGGGGGGGGCTGGGGGCTCCCAGAGCACTGAGCAGGCCAGGCCA
GATGACAGGACACTGGGGTGGGGCTGTAAAACAGGCGAATCTCTAAGCCCCCCCTCCCCC
CGCCAGGGCCCAGCCACCCTAACACAGGGTCCTGGCAGGACAGGTGCTGGTGCCCTGCCC
GCAGATCTCCATAGACACAGCAGCCTCCCGGCACCCAGGCCAGCTTGGCGGCCGCGCCTG
GGACCTTGTCCACACCCTGAGCCACTGACCAGGGCCAGTCTTTTCTACACATGCAGAGAA
GTGTTTTATGTGAACTATAGATATTTTTTTACAACCTATGTGCTGGAGAGAAAGCAGGGG
GCGCGGCCTCCCCCGCAGTAGCCTCATGACGGCTGGGTCTGAAATCCTGCGCAGGTCCAG
CTTGATGTCTTCGCAGCTGCG
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